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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0482800-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:18618052:18618753:1 gene:Os09g0482800 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0482800-01)
Sequence

ATGAGCGTGGAGATTTTGGATGGGAGGACGGTGGAGAGCTTCGTGGAGGACGAGGGGGCC
TTCAACTCGACGGTGGACGACCGGTTCGCGGCGCTGGACGGCGACCGGGACGGCAGGCTG
TCCTACGCCGACATGGCCGGTGAGCTGATGAGCCTCCGCGTGCTGGAGACCCACTTCGGC
GTCGACGGCGCCGCCGCCACGGACGCCGAGCTCGTCGACCTGTACCGCGGCCTGTTCGCC
CGGTTCGACCGCGACGGCGACGGCGCCGTCGACCGTGAGGAGTTCCGCGCCGAGATGAAG
GAGGTGATGCTCGCCGTCGCCAGCGGCCTCGGCTTCCTCCCCGTTCAGATGGTCGTCGAG
GAAGGCAGCTTCCTCAAGAGGGCCGTCGAGAGGGAGCTCGCCAAAGCTGCCTGA

Peptide Sequence

PEP ID

Os09t0482800-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:18618052:18618753:1 gene:Os09g0482800 transcript:Os09t0482800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0482800-01)
Sequence

MSVEILDGRTVESFVEDEGAFNSTVDDRFAALDGDRDGRLSYADMAGELMSLRVLETHFG
VDGAAATDAELVDLYRGLFARFDRDGDGAVDREEFRAEMKEVMLAVASGLGFLPVQMVVE
EGSFLKRAVERELAKAA

Transcript Sequence

Transcript ID

Os09t0482800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:18618052:18618753:1 gene:Os09g0482800 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0482800-01)
Sequence

GTCAAACACCTACAACACCTGAACCAGCTGAGAGCTAGCCAAGAATTCGATCGGGCGAGA
TGAGCGTGGAGATTTTGGATGGGAGGACGGTGGAGAGCTTCGTGGAGGACGAGGGGGCCT
TCAACTCGACGGTGGACGACCGGTTCGCGGCGCTGGACGGCGACCGGGACGGCAGGCTGT
CCTACGCCGACATGGCCGGTGAGCTGATGAGCCTCCGCGTGCTGGAGACCCACTTCGGCG
TCGACGGCGCCGCCGCCACGGACGCCGAGCTCGTCGACCTGTACCGCGGCCTGTTCGCCC
GGTTCGACCGCGACGGCGACGGCGCCGTCGACCGTGAGGAGTTCCGCGCCGAGATGAAGG
AGGTGATGCTCGCCGTCGCCAGCGGCCTCGGCTTCCTCCCCGTTCAGATGGTCGTCGAGG
AAGGCAGCTTCCTCAAGAGGGCCGTCGAGAGGGAGCTCGCCAAAGCTGCCTGATCATCGC
CATCGCCATCGCCAGGCGTCAGAGATTCTGCCTACAGATTTGCAGGTGTATCGAGAGATT
TTTGTAGTATTTACAGAGTGTATACTAATCAAGTGCGTACTGTCCTCTTGCTGAAATGGC
ATTTCAGCCTTTCAGCTATGTAATCCGGGATGGAAAATTTTGTTTGATCTGAATTATTTG
GTGTCAGCAATAAAATCAACGTTTCGATGAAACGATTTCGAG