Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0482500-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:18533039:18535362:1 gene:Os09g0482500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os09t0482500-01)
Sequence

ATGGCGTCCTCGTCGTCGCTTCTTGTTCGTGGGAGAGCGTTCGCGCTGGTTGTGGCTGTA
GCTCTGGTGGCTGCTCCTCGCCGGATTAATGGCGGCGCCGCCGGGCCGGCGGCGAGGACG
AACGACCCCAACTGGCACGTCTTCAGCGTCAGCTCGCTGCTGCCGAGCTCGGCCTGCACT
GCATCGAAAGCGGCGTCCAACTCGTCGGCTCTCGGCGTCGTGCACCGGCACGGGCCGTGC
TCGCCGGTGCAGGCTCGTCCTCGCGGCGGCGGCGGCGCTGTCACCCACGCCGAGATCCTG
GAACGCGACCAGGCCAGGGTCGACTCCATCCACCGCAAGGTCGCCGGCGCCGGGGGCGCG
CCGTCGGTGGTCGACCCGGCACGCGCCTCGGAGCAGGGCGTGTCGCTGCCGGCGCAGAGG
GGCATCTCCCTCGGCACCGGCAACTACGTCGTGTCCGTCGGGCTCGGGACGCCGGCGAAG
CAGTACGCCGTGATCTTCGACACCGGCAGCGACCTGTCGTGGGTGCAGTGCAAGCCCTGC
GCCGACTGCTACGAGCAGCAGGACCCGCTGTTCGACCCGTCGCTGTCGTCGACGTACGCC
GCCGTGGCGTGCGGCGCGCCGGAGTGCCAGGAGCTCGACGCGTCGGGCTGCTCGTCGGAC
AGCAGGTGCCGGTACGAGGTCCAGTACGGCGACCAGTCGCAGACCGACGGCAACCTCGTG
CGCGACACGCTGACGCTCTCGGCGTCGGACACGCTCCCGGGCTTCGTCTTCGGGTGCGGC
GACCAGAACGCCGGGCTGTTCGGCCAGGTCGACGGGCTGTTCGGCCTCGGCAGGGAGAAG
GTGTCGCTGCCGTCGCAGGGCGCGCCGAGCTACGGCCCCGGATTCACCTACTGCCTACCG
TCGTCGTCGAGCGGCAGGGGCTACCTGTCCCTCGGCGGCGCCCCGCCGGCGAACGCGCAG
TTCACGGCGCTGGCCGACGGCGCGACGCCGTCGTTCTACTACATCGACCTCGTCGGCATC
AAGGTCGGCGGCCGCGCGATCAGGATCCCGGCGACGGCGTTCGCGGCGGCCGGCGGCACG
GTGATCGACTCCGGCACGGTGATCACCCGCCTCCCGCCGCGCGCGTACGCGCCGCTCCGC
GCGGCGTTCGCGCGCTCCATGGCGCAGTACAAGAAGGCGCCCGCGCTGTCCATCCTCGAC
ACGTGCTACGACTTCACCGGCCACCGGACGGCGCAGATACCCACGGTGGAGCTGGCGTTC
GCCGGCGGCGCCACCGTCAGCCTCGACTTCACCGGCGTGCTCTACGTCTCCAAGGTGTCG
CAGGCGTGCCTGGCGTTCGCGCCCAACGCCGACGACTCGTCCATCGCCATCCTCGGGAAC
ACGCAGCAGAAGACGTTCGCCGTCGCGTACGACGTTGCCAACCAGAGGATCGGCTTCGGC
GCCAAGGGATGCAGCTGA

Peptide Sequence

PEP ID

Os09t0482500-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:18533039:18535362:1 gene:Os09g0482500 transcript:Os09t0482500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os09t0482500-01)
Sequence

MASSSSLLVRGRAFALVVAVALVAAPRRINGGAAGPAARTNDPNWHVFSVSSLLPSSACT
ASKAASNSSALGVVHRHGPCSPVQARPRGGGGAVTHAEILERDQARVDSIHRKVAGAGGA
PSVVDPARASEQGVSLPAQRGISLGTGNYVVSVGLGTPAKQYAVIFDTGSDLSWVQCKPC
ADCYEQQDPLFDPSLSSTYAAVACGAPECQELDASGCSSDSRCRYEVQYGDQSQTDGNLV
RDTLTLSASDTLPGFVFGCGDQNAGLFGQVDGLFGLGREKVSLPSQGAPSYGPGFTYCLP
SSSSGRGYLSLGGAPPANAQFTALADGATPSFYYIDLVGIKVGGRAIRIPATAFAAAGGT
VIDSGTVITRLPPRAYAPLRAAFARSMAQYKKAPALSILDTCYDFTGHRTAQIPTVELAF
AGGATVSLDFTGVLYVSKVSQACLAFAPNADDSSIAILGNTQQKTFAVAYDVANQRIGFG
AKGCS

Transcript Sequence

Transcript ID

Os09t0482500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:18533039:18535362:1 gene:Os09g0482500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase A1 domain containing protein. (Os09t0482500-01)
Sequence

AGCTGCACGGACAAATTAAGCGAGGGAGTGAGAGCTAGCTAACTCAGGCTCAGCCAACTG
ATCGCGAGCTGTGACGAGGTGATCACCATGGCGTCCTCGTCGTCGCTTCTTGTTCGTGGG
AGAGCGTTCGCGCTGGTTGTGGCTGTAGCTCTGGTGGCTGCTCCTCGCCGGATTAATGGC
GGCGCCGCCGGGCCGGCGGCGAGGACGAACGACCCCAACTGGCACGTCTTCAGCGTCAGC
TCGCTGCTGCCGAGCTCGGCCTGCACTGCATCGAAAGCGGCGTCCAACTCGTCGGCTCTC
GGCGTCGTGCACCGGCACGGGCCGTGCTCGCCGGTGCAGGCTCGTCCTCGCGGCGGCGGC
GGCGCTGTCACCCACGCCGAGATCCTGGAACGCGACCAGGCCAGGGTCGACTCCATCCAC
CGCAAGGTCGCCGGCGCCGGGGGCGCGCCGTCGGTGGTCGACCCGGCACGCGCCTCGGAG
CAGGGCGTGTCGCTGCCGGCGCAGAGGGGCATCTCCCTCGGCACCGGCAACTACGTCGTG
TCCGTCGGGCTCGGGACGCCGGCGAAGCAGTACGCCGTGATCTTCGACACCGGCAGCGAC
CTGTCGTGGGTGCAGTGCAAGCCCTGCGCCGACTGCTACGAGCAGCAGGACCCGCTGTTC
GACCCGTCGCTGTCGTCGACGTACGCCGCCGTGGCGTGCGGCGCGCCGGAGTGCCAGGAG
CTCGACGCGTCGGGCTGCTCGTCGGACAGCAGGTGCCGGTACGAGGTCCAGTACGGCGAC
CAGTCGCAGACCGACGGCAACCTCGTGCGCGACACGCTGACGCTCTCGGCGTCGGACACG
CTCCCGGGCTTCGTCTTCGGGTGCGGCGACCAGAACGCCGGGCTGTTCGGCCAGGTCGAC
GGGCTGTTCGGCCTCGGCAGGGAGAAGGTGTCGCTGCCGTCGCAGGGCGCGCCGAGCTAC
GGCCCCGGATTCACCTACTGCCTACCGTCGTCGTCGAGCGGCAGGGGCTACCTGTCCCTC
GGCGGCGCCCCGCCGGCGAACGCGCAGTTCACGGCGCTGGCCGACGGCGCGACGCCGTCG
TTCTACTACATCGACCTCGTCGGCATCAAGGTCGGCGGCCGCGCGATCAGGATCCCGGCG
ACGGCGTTCGCGGCGGCCGGCGGCACGGTGATCGACTCCGGCACGGTGATCACCCGCCTC
CCGCCGCGCGCGTACGCGCCGCTCCGCGCGGCGTTCGCGCGCTCCATGGCGCAGTACAAG
AAGGCGCCCGCGCTGTCCATCCTCGACACGTGCTACGACTTCACCGGCCACCGGACGGCG
CAGATACCCACGGTGGAGCTGGCGTTCGCCGGCGGCGCCACCGTCAGCCTCGACTTCACC
GGCGTGCTCTACGTCTCCAAGGTGTCGCAGGCGTGCCTGGCGTTCGCGCCCAACGCCGAC
GACTCGTCCATCGCCATCCTCGGGAACACGCAGCAGAAGACGTTCGCCGTCGCGTACGAC
GTTGCCAACCAGAGGATCGGCTTCGGCGCCAAGGGATGCAGCTGATTACAATCCGAGATG
ATGAATCAATCGATCATTTTGTTTTGTTACAGTGACATATATATGGGG