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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0481800-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:18508899:18510757:-1 gene:Os09g0481800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nitrogen-fixing NifU, C-terminal domain containing protein. (Os09t0481800-01)
Sequence

ATGGCGCTCGTCACCGTCCACGCGCGCCTCGCCGCCGCCGCCTCCTCCGCCTCGCCGCCG
CTTCGCTCCGCCGCCTCCTGCACCCGCCTCCGTGCCCTCAGTACAGTCACCGGAACCCGC
CTCAGCATTCGGCACCAACAGCGCCGGCGCTGGCGGCGGCCGAGGCGCGCCGCCGCCATC
GCCGCGTCGCTCGACCTCAACGAGGACAACGTCCGCCTCGCCATCGACGAAGCCAAGGCC
GAGCTGGGTCAGCTGTTCGACACATCGGTGGGAATCACAGGGCAAGTTGATCTCGCGGAG
CTGGACGGGCCGTTCGTGAAGCTCCGGCTCAAGGGCAAGTTCTGGCACACCCGCGCCACC
GTGCTCGCGCGGATCGGCAACTACCTCAAGAACCGCATCCCGGAAATCTTGGAAGTGGAG
ATAGAAGATGAGAAGCAGCTTGATGATAGCCCTGCAGCCTTCTGA

Peptide Sequence

PEP ID

Os09t0481800-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:18508899:18510757:-1 gene:Os09g0481800 transcript:Os09t0481800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nitrogen-fixing NifU, C-terminal domain containing protein. (Os09t0481800-01)
Sequence

MALVTVHARLAAAASSASPPLRSAASCTRLRALSTVTGTRLSIRHQQRRRWRRPRRAAAI
AASLDLNEDNVRLAIDEAKAELGQLFDTSVGITGQVDLAELDGPFVKLRLKGKFWHTRAT
VLARIGNYLKNRIPEILEVEIEDEKQLDDSPAAF

Transcript Sequence

Transcript ID

Os09t0481800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:18508899:18510757:-1 gene:Os09g0481800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nitrogen-fixing NifU, C-terminal domain containing protein. (Os09t0481800-01)
Sequence

GCTTTCCACATCCGCCGCGGCCATGGCGCTCGTCACCGTCCACGCGCGCCTCGCCGCCGC
CGCCTCCTCCGCCTCGCCGCCGCTTCGCTCCGCCGCCTCCTGCACCCGCCTCCGTGCCCT
CAGTACAGTCACCGGAACCCGCCTCAGCATTCGGCACCAACAGCGCCGGCGCTGGCGGCG
GCCGAGGCGCGCCGCCGCCATCGCCGCGTCGCTCGACCTCAACGAGGACAACGTCCGCCT
CGCCATCGACGAAGCCAAGGCCGAGCTGGGTCAGCTGTTCGACACATCGGTGGGAATCAC
AGGGCAAGTTGATCTCGCGGAGCTGGACGGGCCGTTCGTGAAGCTCCGGCTCAAGGGCAA
GTTCTGGCACACCCGCGCCACCGTGCTCGCGCGGATCGGCAACTACCTCAAGAACCGCAT
CCCGGAAATCTTGGAAGTGGAGATAGAAGATGAGAAGCAGCTTGATGATAGCCCTGCAGC
CTTCTGAGTGGCATTCACCAGTCAATGGCTCCCTCCAATGCACATTGCACAAACCTGAAT
TTCTGAAGTTAAGCTGAAGAACCAAGTCTGCTGGAATGCACTATCCTACATTCCTACCTT
ACTTTTCTGGTCAACATCGCACAAATTCAGGGATCTCCAATTCCCCTACATTTTGATTGT
GGAGATGCGTATGATTTGAGACTATTCTATTTTACTAGCACTCACGAGTCGCAAGAACCT
GAAAACTGTACTGACGGGACCTACTTACGGAGAGGTTTATTAGACGCTTTTCCTGATTCT
GAGCTTGTTGGTATCACCTTTATGTGTATTTATTTAAAAAAAGGGTGTAGCAATGATGTG
CTGCTATTCTGAGTACT