Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0481300-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:18470587:18473910:-1 gene:Os09g0481300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Rwp34 (Fragment). (Os09t0481300-01)
Sequence	ATGGATTCCGGCGGCAACAGCGTGAATTCTGCGGTGGAGTCGGTGGCGGAGTCGCCGGCG CCGGCTTCACCGGCGAGCAATCCCACCGCACCCGCCGCGGTCACCAAGGGGCGTGGGCTA CGGCGGTGGCGGCGTATCCCCCGGGAACACCACGAGGAGGGCTCACCCGCCGCCGCTGCC GTGGAGGAGGTGGGGAGCGAGAGCCCCGTCGCCTCCGTGGAGTCCAGCTTCGCGCCGCAG GAGGCGCCACCGTCGCCGCCGGTCCAGACCAAGCTGGACCCGGATCTCGGCTTCCTGATC GCCTCGGCGGGGTTCTCGGTGGGCGCCGGCGGCGCCGACTCGGACAACAGCGACGACCGG GCCAGCAAGTCCTCCACCAACGCCGCCGCGCCGCGCCACGACTTCTCGTTCGGCGGCGGC TTCGGCCGCGAGCGCGACAGGCCGCGATCCCGCGCCCCAGGCGCCGCCGCGCACGCCAAG GGCATCCGCACGGCGCGCACGCGCGGAGCCCACGGCGCGCGCGCCGCCACACCGACCCCC TCCATCGTGGAGCCGGAGAACTCGCGCTCCAGCGTTGAATCCAACCTCCGGAGCTCTGCC GCTGCTCATGCGCGCCAATCCAGTGCTGGCATAAGCAGCAATGGCGTTCACAAGGTTCTC TATGATGATGATGACGATGATGATGATGATGCCGAGCAGAGTGACGGCGAGCCTCCGAGC GAGGAGGCGGCGCGCTCTGGAGCAGGAGGTTTCTACAGGGAGAATGGAAGTGTAGTAGGG AGATTGGTAAAGGGCAGCAGTGATTCCGATGCCGATGATCATGGATACGATGAGAGGAGT ATAGGCAAGGGTGAGAATGGGGAAATTCATTCGGGTCTCGATCCGTATGTGCAGTCGATC GCGATGCTCCGGTCAGCCGAAGAAGCAATTGAGAATGAGATCCAGAAGTTTATTGAAATG AGAAATGAAACGTGTGAAAATTCTGCAAACAACCACAGTGAAACTGAATGGAGTAGTTCA TGCCATTTTGACGAATCCACAGAAGAACTGAGTGAGAAGTTGAAGCTTCTCGAGTCTAGG CTAAACGAAGCTTCTACCCTCATCAATGATAAGGATTCAGAAATACTTGAACTCGATGTG CTCAACCACAAACAACCAAAGCAGCATGTTCTATGCAATACCGAGCTGCTGTCTCTGCAA TCTGATATGGATCAACTGTTCCTGGAGAAGATGGAAGCAGAGACTCAATGCTTCATCCTG ACAAGAGCATCGCAAGCTTGGAATCCCCTGACTGAGGATCAAGCTGCTATTTTTGACATT CAGAAATCTCTACCTGAGGATCACAAACAGCTTGAAGCTAAGCTACGGCACACCGAGAAC AGGGCACTGATGCTAGAGGAGATGGTGGAGAAGCTAGAGGCACAGTGCAAAGATCTTGCT AGGACTTCAGAAATCCTGAAGCTGCAGGCAAGAGCAAGCAGAGCTTCGCTGTTTTGCTCC GTCCAGTTTGTTCTGCTGTTCATCGCCGTCGGAACCTTCCTCGTCCGGCTATGGCCCTCT TCCTCTGAATTTGTACCTACCTGA

Peptide Sequence

PEP ID	Os09t0481300-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:18470587:18473910:-1 gene:Os09g0481300 transcript:Os09t0481300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Rwp34 (Fragment). (Os09t0481300-01)
Sequence	MDSGGNSVNSAVESVAESPAPASPASNPTAPAAVTKGRGLRRWRRIPREHHEEGSPAAAA VEEVGSESPVASVESSFAPQEAPPSPPVQTKLDPDLGFLIASAGFSVGAGGADSDNSDDR ASKSSTNAAAPRHDFSFGGGFGRERDRPRSRAPGAAAHAKGIRTARTRGAHGARAATPTP SIVEPENSRSSVESNLRSSAAAHARQSSAGISSNGVHKVLYDDDDDDDDDAEQSDGEPPS EEAARSGAGGFYRENGSVVGRLVKGSSDSDADDHGYDERSIGKGENGEIHSGLDPYVQSI AMLRSAEEAIENEIQKFIEMRNETCENSANNHSETEWSSSCHFDESTEELSEKLKLLESR LNEASTLINDKDSEILELDVLNHKQPKQHVLCNTELLSLQSDMDQLFLEKMEAETQCFIL TRASQAWNPLTEDQAAIFDIQKSLPEDHKQLEAKLRHTENRALMLEEMVEKLEAQCKDLA RTSEILKLQARASRASLFCSVQFVLLFIAVGTFLVRLWPSSSEFVPT

Transcript Sequence

Transcript ID	Os09t0481300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18470587:18473910:-1 gene:Os09g0481300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Rwp34 (Fragment). (Os09t0481300-01)
Sequence	GCCTTCCCACTAGTACTTCTCTTTTCTTGATTTCTTCCTCCTCCTCGGATCCCTCCAAGA TCGAGGCCGATCCCCACCATGCGCGCCCACCGATCCCGACAGCTCGTGTCCCGCGATCCC ATGGCGGTTCTCTGATCCCATCTGGCTCGCGAAGCCGCCGCGTTTTGACGGGAATTGCGT GGGCTGCGGGCGGCTGGACGCCATGGATTCCGGCGGCAACAGCGTGAATTCTGCGGTGGA GTCGGTGGCGGAGTCGCCGGCGCCGGCTTCACCGGCGAGCAATCCCACCGCACCCGCCGC GGTCACCAAGGGGCGTGGGCTACGGCGGTGGCGGCGTATCCCCCGGGAACACCACGAGGA GGGCTCACCCGCCGCCGCTGCCGTGGAGGAGGTGGGGAGCGAGAGCCCCGTCGCCTCCGT GGAGTCCAGCTTCGCGCCGCAGGAGGCGCCACCGTCGCCGCCGGTCCAGACCAAGCTGGA CCCGGATCTCGGCTTCCTGATCGCCTCGGCGGGGTTCTCGGTGGGCGCCGGCGGCGCCGA CTCGGACAACAGCGACGACCGGGCCAGCAAGTCCTCCACCAACGCCGCCGCGCCGCGCCA CGACTTCTCGTTCGGCGGCGGCTTCGGCCGCGAGCGCGACAGGCCGCGATCCCGCGCCCC AGGCGCCGCCGCGCACGCCAAGGGCATCCGCACGGCGCGCACGCGCGGAGCCCACGGCGC GCGCGCCGCCACACCGACCCCCTCCATCGTGGAGCCGGAGAACTCGCGCTCCAGCGTTGA ATCCAACCTCCGGAGCTCTGCCGCTGCTCATGCGCGCCAATCCAGTGCTGGCATAAGCAG CAATGGCGTTCACAAGGTTCTCTATGATGATGATGACGATGATGATGATGATGCCGAGCA GAGTGACGGCGAGCCTCCGAGCGAGGAGGCGGCGCGCTCTGGAGCAGGAGGTTTCTACAG GGAGAATGGAAGTGTAGTAGGGAGATTGGTAAAGGGCAGCAGTGATTCCGATGCCGATGA TCATGGATACGATGAGAGGAGTATAGGCAAGGGTGAGAATGGGGAAATTCATTCGGGTCT CGATCCGTATGTGCAGTCGATCGCGATGCTCCGGTCAGCCGAAGAAGCAATTGAGAATGA GATCCAGAAGTTTATTGAAATGAGAAATGAAACGTGTGAAAATTCTGCAAACAACCACAG TGAAACTGAATGGAGTAGTTCATGCCATTTTGACGAATCCACAGAAGAACTGAGTGAGAA GTTGAAGCTTCTCGAGTCTAGGCTAAACGAAGCTTCTACCCTCATCAATGATAAGGATTC AGAAATACTTGAACTCGATGTGCTCAACCACAAACAACCAAAGCAGCATGTTCTATGCAA TACCGAGCTGCTGTCTCTGCAATCTGATATGGATCAACTGTTCCTGGAGAAGATGGAAGC AGAGACTCAATGCTTCATCCTGACAAGAGCATCGCAAGCTTGGAATCCCCTGACTGAGGA TCAAGCTGCTATTTTTGACATTCAGAAATCTCTACCTGAGGATCACAAACAGCTTGAAGC TAAGCTACGGCACACCGAGAACAGGGCACTGATGCTAGAGGAGATGGTGGAGAAGCTAGA GGCACAGTGCAAAGATCTTGCTAGGACTTCAGAAATCCTGAAGCTGCAGGCAAGAGCAAG CAGAGCTTCGCTGTTTTGCTCCGTCCAGTTTGTTCTGCTGTTCATCGCCGTCGGAACCTT CCTCGTCCGGCTATGGCCCTCTTCCTCTGAATTTGTACCTACCTGAGGTTAGAAAATCCG GCGCCAATGAGCCTTTGTGTAGGCATTCTTGAAAAGTTCCTTATTGTAATTTACTAAGCA TTGGTCACCCTATAATTTTTCAAGTCTGTAACATCAACTCAATTTTGCTAGTAATCTCTT CTTATCTTTACTGTACTTCAATCACCAATGTACTTCTCGATTATCTGGATTCTGTAAATG TCAAAAGTTCCTATATAAATGTATTTCTTTGCAGACCGTATAAATTGAAATTGG