Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0481100-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:18464265:18469034:1 gene:Os09g0481100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 10, Sec14-nodulin domain protein 10 description:Similar to Phosphatidylinositol transfer-like protein IV. (Os09t0481100-01)
Sequence	ATGTCAGTGAGCCATGGCGAGGAGCTCGAGATATCGCCGTGCGACCCGAACTCCGAGGAT GACCGGCGGCGGCGCGGGATGGGGTCGTCGCTGCGGCGGAAGGCCATCCGCGCGCTCCGG AAGCGCGGCGGGCGGCGGCGGCGCCGCCGCGTCGACTTCCGGTACCCGGCCGCCATGTCC ATCGAGGACGTCCGCGACGCCGAGGAGGAGCTCGCCGTCGCCGCGTTCCGCGACCGCCTC GCCGTGCACGCCCTCCTCCCCGACAAGCACGACGACTACCACATGATGCTCAGGTTTCTG AAGGCAAGAAAGTTTGATTCGGAGAAGGCGATGCAAATGTGGGCGGAGATGCTGCGATGG AGGAAGGAGTTCGGAGCCGACACGATCTTGGAGGAGTTCGAGTTCGATGAGCTCGACGAC GTGCTCCGGTACTACCCTCAGGGCTACCATGGCGTCGATCGGGAAGGCCGGCCGGTGTAC ATCGAGAGGCTCGGCAAGGTGTATCCCAACAAGCTGATGCAGATCACCTCGGTGGACAGG TACATCAAGTACCATGTGCAGGAGTTCGAGAGGGCTTTCAGGGAGAGGTTCCCTGCCTGC ACATTGGCGGCCAAGAGGCACATTGATTCCACAACCACCATACTGGATGTCCATGGCGTG GGGCTGAAGAATTTCTCAAAGACTGCAAGGGAGCTTGTTCACCGGATGCAGAAGATAGAT AGTGATTACTATCCTGAGACATTACATCAGATGTATGTAGTGAATGCTGGCAGTGGCTTC AAGCTGATATGGAACAGTGTGAAAGGGTTTCTTGACCCAAAAACTTCTTCAAAGATTCAT GTTCTTGGTACAAACTACCAGAGTAGACTTCTTGAAGTAATTGACAAAAGTGAATTGCCA GAGTTTCTTGGCGGTTCATGTACATGCAGTGAAGGTGGTTGCCTTGGTTCTAACAAAGGG CCGTGGAATGATCATGTCATTTTGAAGCTGATACACAGTATGAGGAGCAGTAGTAGTATG AGGGAAATCAAGCAAGTTTCTGATAGCGAAGACAGGAGCGGATCTTCCCTAAGGGCAGAA AAATTGAAGGGGATGATGAGTGATATATCAAATGCTGAATCAGAGTCAGATGTTGATGAG TTCAGTTTATCAGCTGTCCTGAGGAGTACTGACTACAGTTTCCTTACTCCAGTTAGCGAA GAAGTTAAGGGATCAGATTCTTCAACTTTCTGTAGTTGTGAGTCTTGTGACAGGAAGGGT CTCCCAGATGTAACTCCTGAATCTTCTCAGTCTGTACAACAATCTTCTGAAATGGTGCCA AACCAACTGGTCTCTCATGAACATTCATCCACAACCAGATGGATGAATAATTTAGGGAAC ATGGCAATTAGTTTTCATGGCACTCTGACTGGAAGGACTTTGAGCAATTTCGTTAGAGTA GTAGGCACACTCATGATCAAGATACTAGCCGTTTTCAGCCTTTTTGTCAGTAGAAGAGGA AACATGCTAGAGAATGTTCATCCTTCTAATGTAGAAGATGAACCTCAGCCTCGAAGTGCA ACGGAAGATAACATGAGTGCTTGTTTACAACGTCTTGAAAAACTTGAATCATTATGCAAT CATCTCATGAGCAAACCTCCAGATATGCCAAAGGAGAAAGAGTGTCTACTGCTACAATCG TTTGATCGGATAAAAACCATCGAATCGGATCTAGAAAGGACTAAAAGAGTATTGCATATG ACCCTGGTCAAGCAGATGGAGATGATGGAGACCTTGGAAGCTATGCAACATCACTACCAA TCTTCCAGTGTCAGGAGGAGATTGTGCTGTTCATAA

Peptide Sequence

PEP ID	Os09t0481100-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:18464265:18469034:1 gene:Os09g0481100 transcript:Os09t0481100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 10, Sec14-nodulin domain protein 10 description:Similar to Phosphatidylinositol transfer-like protein IV. (Os09t0481100-01)
Sequence	MSVSHGEELEISPCDPNSEDDRRRRGMGSSLRRKAIRALRKRGGRRRRRRVDFRYPAAMS IEDVRDAEEELAVAAFRDRLAVHALLPDKHDDYHMMLRFLKARKFDSEKAMQMWAEMLRW RKEFGADTILEEFEFDELDDVLRYYPQGYHGVDREGRPVYIERLGKVYPNKLMQITSVDR YIKYHVQEFERAFRERFPACTLAAKRHIDSTTTILDVHGVGLKNFSKTARELVHRMQKID SDYYPETLHQMYVVNAGSGFKLIWNSVKGFLDPKTSSKIHVLGTNYQSRLLEVIDKSELP EFLGGSCTCSEGGCLGSNKGPWNDHVILKLIHSMRSSSSMREIKQVSDSEDRSGSSLRAE KLKGMMSDISNAESESDVDEFSLSAVLRSTDYSFLTPVSEEVKGSDSSTFCSCESCDRKG LPDVTPESSQSVQQSSEMVPNQLVSHEHSSTTRWMNNLGNMAISFHGTLTGRTLSNFVRV VGTLMIKILAVFSLFVSRRGNMLENVHPSNVEDEPQPRSATEDNMSACLQRLEKLESLCN HLMSKPPDMPKEKECLLLQSFDRIKTIESDLERTKRVLHMTLVKQMEMMETLEAMQHHYQ SSSVRRRLCCS

Transcript Sequence

Transcript ID	Os09t0481100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18464265:18469034:1 gene:Os09g0481100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Sec14-nodulin domain-containing protein 10, Sec14-nodulin domain protein 10 description:Similar to Phosphatidylinositol transfer-like protein IV. (Os09t0481100-01)
Sequence	ATATATGATCAGTTATTTAGTTGATCACCGGCCACTCTTCTTCCTGATCTGCAGAGCTGC AGTCTCAGTCTGTCCTGCCGTCCATACAGCAACAGCAACGCAGGACTACAGGAGAGGTCG TAGCACTCTCGGTTTGTGCCGATTGGATCCAGAAAATTCAAGATCCAAATTTAATCCGGA AGCGAGACAATGTCAGTGAGCCATGGCGAGGAGCTCGAGATATCGCCGTGCGACCCGAAC TCCGAGGATGACCGGCGGCGGCGCGGGATGGGGTCGTCGCTGCGGCGGAAGGCCATCCGC GCGCTCCGGAAGCGCGGCGGGCGGCGGCGGCGCCGCCGCGTCGACTTCCGGTACCCGGCC GCCATGTCCATCGAGGACGTCCGCGACGCCGAGGAGGAGCTCGCCGTCGCCGCGTTCCGC GACCGCCTCGCCGTGCACGCCCTCCTCCCCGACAAGCACGACGACTACCACATGATGCTC AGGTTTCTGAAGGCAAGAAAGTTTGATTCGGAGAAGGCGATGCAAATGTGGGCGGAGATG CTGCGATGGAGGAAGGAGTTCGGAGCCGACACGATCTTGGAGGAGTTCGAGTTCGATGAG CTCGACGACGTGCTCCGGTACTACCCTCAGGGCTACCATGGCGTCGATCGGGAAGGCCGG CCGGTGTACATCGAGAGGCTCGGCAAGGTGTATCCCAACAAGCTGATGCAGATCACCTCG GTGGACAGGTACATCAAGTACCATGTGCAGGAGTTCGAGAGGGCTTTCAGGGAGAGGTTC CCTGCCTGCACATTGGCGGCCAAGAGGCACATTGATTCCACAACCACCATACTGGATGTC CATGGCGTGGGGCTGAAGAATTTCTCAAAGACTGCAAGGGAGCTTGTTCACCGGATGCAG AAGATAGATAGTGATTACTATCCTGAGACATTACATCAGATGTATGTAGTGAATGCTGGC AGTGGCTTCAAGCTGATATGGAACAGTGTGAAAGGGTTTCTTGACCCAAAAACTTCTTCA AAGATTCATGTTCTTGGTACAAACTACCAGAGTAGACTTCTTGAAGTAATTGACAAAAGT GAATTGCCAGAGTTTCTTGGCGGTTCATGTACATGCAGTGAAGGTGGTTGCCTTGGTTCT AACAAAGGGCCGTGGAATGATCATGTCATTTTGAAGCTGATACACAGTATGAGGAGCAGT AGTAGTATGAGGGAAATCAAGCAAGTTTCTGATAGCGAAGACAGGAGCGGATCTTCCCTA AGGGCAGAAAAATTGAAGGGGATGATGAGTGATATATCAAATGCTGAATCAGAGTCAGAT GTTGATGAGTTCAGTTTATCAGCTGTCCTGAGGAGTACTGACTACAGTTTCCTTACTCCA GTTAGCGAAGAAGTTAAGGGATCAGATTCTTCAACTTTCTGTAGTTGTGAGTCTTGTGAC AGGAAGGGTCTCCCAGATGTAACTCCTGAATCTTCTCAGTCTGTACAACAATCTTCTGAA ATGGTGCCAAACCAACTGGTCTCTCATGAACATTCATCCACAACCAGATGGATGAATAAT TTAGGGAACATGGCAATTAGTTTTCATGGCACTCTGACTGGAAGGACTTTGAGCAATTTC GTTAGAGTAGTAGGCACACTCATGATCAAGATACTAGCCGTTTTCAGCCTTTTTGTCAGT AGAAGAGGAAACATGCTAGAGAATGTTCATCCTTCTAATGTAGAAGATGAACCTCAGCCT CGAAGTGCAACGGAAGATAACATGAGTGCTTGTTTACAACGTCTTGAAAAACTTGAATCA TTATGCAATCATCTCATGAGCAAACCTCCAGATATGCCAAAGGAGAAAGAGTGTCTACTG CTACAATCGTTTGATCGGATAAAAACCATCGAATCGGATCTAGAAAGGACTAAAAGAGTA TTGCATATGACCCTGGTCAAGCAGATGGAGATGATGGAGACCTTGGAAGCTATGCAACAT CACTACCAATCTTCCAGTGTCAGGAGGAGATTGTGCTGTTCATAAGTAAAAGACTGCTCT TGTCTGGCTGGCCTTGAGCGACCATGAAGACTGAAGCTGTAGCCTGAAAACCTTCTGCAA GTGCCATTTTTGACTCGGAGATCTTCAGCCCTGTGCAGAGGAAAGATCATCGCTCGCTCA GCTCTGTCGCTGGCTTGCTGCATCGCAGCTTGTGAATCCGTTTTGGTAGCTGTTAATCTC AACAATAATCCCTTTTTTGCCTCCCTGAACATTACCAATAGCAAGATCAGTGATGCATCT GTCAGCTGCTGTAGCTCTCTGCTCTGAATTGGAGGATTGAAGGGAGAATCTGTTGTTACA TTGTCTGAATTTTTGTGATCCATATGCTGAAAGGACGTTTCATGGCGGCTGTGCTTCTTC CTTTGCT