Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0479500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:18391869:18397839:-1 gene:Os09g0479500 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os09t0479500-01)
Sequence	ATGGCAGAAATTATCGTTCTTTTTGTCATAAAAAAGATAGGAATAGCTGTGGCAGGTGAA ACACTGAAGCTAGCTAAACCCTTGCTTGCAAACAAAACCGAGTTAAAGAAAGCTGAGCTA GTAACAGCACTTCCAGTTAACATGAAACTGATAAAAGATGAACTTGAGGTTATCAATGCA TTTCTGAAGGAACTTGGCATGAATGGATGCAAAGGTGAAGTTGTAGAAACTTGGGTAAGG CAAGTACGGAGGTTGGCGCATGATATGGAAGATGTTGTGGATGAGTTTATGTATGTTATT GGCAAAAACAAAGAGAGAGAGTCACGAGCTTATGTGAAGAAAATTATCAAGAAACCTAAA CCTTTATTTTCACTTGATGAAATTGCTACTAAAGCAGATAGGATAAACAGACAGCTTATG GAGCTTTCTAAAAGACTAGGACGTTGGACCCAACCGATATTGAGTGGGGGTAGTATTCCT GCAACAAAATATGACACTGAACAACAACAGTTGTATCTACCTGGACATGATTATTCAATT ACTGATGCTGAGCTTGTAGGAATTGATAAAAATAGACAAACCTTGATTGAATCATTGTGT TTGGAAGATTGTTCTCTTCGGATCATTGCTGTCTGGGGCATGGGTGGCCTTGGGAAAAGC ACTCTTGTCAACAATGTCTACAAAAAAGAAGCAACAGTATCCAATTTCAATTACCGTGCA TGGCTTTCTATCTCTCAGTCATGTAGAGTACTTGATATTTGGCGAAACATGCTGAAAGAG CTCTGTGGAAAAGAAAGCAGAGAGTTTGATGCTGAAAATATGAGCAGTACAGAACTAAAA GTGGAATTAACTAAAATTCTGGATCAAAAGCGGTACTTGATCATATTGGATGATGTCTGG TTGGCTACAGATTTTTTAAAGATTAGAGAGGTTCTTGTTGATAATGGCCTAGGAAGCAGA GTAATAATCACAACAAGAATTGAGGAAGTTGCTTCCATAGCTGAGAATGGTTGTAAGATC AGTTTAGAGCCTCTAGATAACCATGATGCATGGCTTCTCTTCTGTAGGAAAGCATTTCCA AAAATTGAAGATCATATATGCCCTCCAGAATTAGAGCAGTGTGGTATGGACATTATCGAT AAATGTGACGGTTTGCCTTTAGCTCTTGTGGCAATAGGGAGTTTATTGTCCTTCAAATCA AAGAATAATAAAGATTGGAGGCTTTTCTACAATCAACTTATTTCAGAGGTACACAATAAT GAGAACTTAAACCGGGTGGAGAAAATTCTAAATCTAAGCTACAAGCACCTGCCAAACCAT CTGAAGTATTGTTTCTTATATTGTGCTATGTTCCCAGAAGATTATCTGATTCACAGAAAG AGATTAATTAGACTGTGGATCAGTGAAGGATTTATAGAACAAAAAGGAGCATGCAGCTTA GAAGATGTCGCTGAAGGTTACCTAGCAGAGCTTGTCCAACGAAGCATGCTTCAAGTTGTA GCATGTAACAGTTTTGATAGGGTTCAGTGTCTTCGAATGCATGACATTGTGCGTGAATTA GCCATTTTCCAATTGAAGAAAGAAAGTTTCTGTACAATTTATGATGACACTCATGGAGTG GCACAAGTGGGATTAGACTCTCGTCGTGTCTCGGTGCTTCGATGCAACAATGATATTAGA TCAAGCATAGATCCATCCAGGCTTCACACCTTCATAGCATTTGACACCACCATGGCATTA TCTTCATGGTCTTCTTTCATTTTCTCAGAATCTAAGTACCTTAATGTATTAGACTTGTCA GGCTTGCCTATTGAGACTATTCCATATTCAGTTGGGGAGCTGTTTAACCTTCGGTTTTTG TGTCTCAACGACACCAATGTGAAGGAATTCCCAAAATCTGTTACGAAGCTTAGCAATTTA CAAACATTGAGCCTTGAACGTACCCAGTTGTTGAATTTCCCACGAGGGTTTTCAAATCTA AAGAAATTGCGCCATCTGCTTGTTTGGAAGTTAGTAGATGCTACATACAAAAGTCTGAAT AACTGGGAATCTATGGAGCCATTTGAGGGCTTGTGGGACTTGAAGGAATTGCATTATTTG AATGAGGTTCGTGCAACTAAAGCCTTTGTTTCAAATCTAGGAAATTTATCCCAGCTGAGG AGCCTCTGCATTACTTATGTAAGGAGTAGTCACTGTGTGCAATTGTGCAACTCTTTATCA AAGATGCAACATCTCACAAGATTAAACATAAGAGCACGCAATGAAGATGAGCTGCTCTTG CTGGATGATTTCACATTGTCAAACCCTCTCGAAAAGCTTGAACTGGTAGGCCAGTTGTCA GAAGGAACCTTGGAATCTCCCTTTTTCTCTATTCATGGATATAAACTCCTGCAAATTGAA CTTTCATGGTGTAAGCTCACAGTGAATCCAGTGGCCCGCCTTGCAGAGTTCTCGGATTTA ACCGAGTTACGTCTTACAAGGGTGTACACTGGGCCTTGGCTGTACTTTCCTGCAAACTGG TTCCCGAAATTAAAGAAAGCCGTCTTGTGGGATTTGCAGCAAGTGAAGCAAATATTTATA CAGGAGGGAGCTCTGGCCAACCTGCATTATCTTCACATCGATAGCCTCATGGAACTACGT GACATCCCTGTCGGTATTGAGTTTCTCAGTTCAGTGAAAGAGGCATATTTTACCAGGATG CATTCTGATTTTGTAAGGAATTTACGAACAGGAAAGATAAGCCATATCCCGAAGGTCCAC TGGTCAACACAAGGGGTGTCCACGGATCTCACTGGACTTGCTAATCTGCCTGGAGCATCC AACATGACCAACACAAACCCAGAATGGCGCATCTTAGGTGGATCAGGCTGGGTTTTCATC TAA

Peptide Sequence

PEP ID	Os09t0479500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:18391869:18397839:-1 gene:Os09g0479500 transcript:Os09t0479500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os09t0479500-01)
Sequence	MAEIIVLFVIKKIGIAVAGETLKLAKPLLANKTELKKAELVTALPVNMKLIKDELEVINA FLKELGMNGCKGEVVETWVRQVRRLAHDMEDVVDEFMYVIGKNKERESRAYVKKIIKKPK PLFSLDEIATKADRINRQLMELSKRLGRWTQPILSGGSIPATKYDTEQQQLYLPGHDYSI TDAELVGIDKNRQTLIESLCLEDCSLRIIAVWGMGGLGKSTLVNNVYKKEATVSNFNYRA WLSISQSCRVLDIWRNMLKELCGKESREFDAENMSSTELKVELTKILDQKRYLIILDDVW LATDFLKIREVLVDNGLGSRVIITTRIEEVASIAENGCKISLEPLDNHDAWLLFCRKAFP KIEDHICPPELEQCGMDIIDKCDGLPLALVAIGSLLSFKSKNNKDWRLFYNQLISEVHNN ENLNRVEKILNLSYKHLPNHLKYCFLYCAMFPEDYLIHRKRLIRLWISEGFIEQKGACSL EDVAEGYLAELVQRSMLQVVACNSFDRVQCLRMHDIVRELAIFQLKKESFCTIYDDTHGV AQVGLDSRRVSVLRCNNDIRSSIDPSRLHTFIAFDTTMALSSWSSFIFSESKYLNVLDLS GLPIETIPYSVGELFNLRFLCLNDTNVKEFPKSVTKLSNLQTLSLERTQLLNFPRGFSNL KKLRHLLVWKLVDATYKSLNNWESMEPFEGLWDLKELHYLNEVRATKAFVSNLGNLSQLR SLCITYVRSSHCVQLCNSLSKMQHLTRLNIRARNEDELLLLDDFTLSNPLEKLELVGQLS EGTLESPFFSIHGYKLLQIELSWCKLTVNPVARLAEFSDLTELRLTRVYTGPWLYFPANW FPKLKKAVLWDLQQVKQIFIQEGALANLHYLHIDSLMELRDIPVGIEFLSSVKEAYFTRM HSDFVRNLRTGKISHIPKVHWSTQGVSTDLTGLANLPGASNMTNTNPEWRILGGSGWVFI

Transcript Sequence

Transcript ID	Os09t0479500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18391869:18397839:-1 gene:Os09g0479500 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os09t0479500-01)
Sequence	GTCCGCAAATATGTCTTCTCGTCTTTCCCCCTTCTCCTGTAGCGGCGATCACCGCCTCAC CGGCGAACGGGAAGATGACGCGGGGGGTACCCTGGCCTTCGCCGTGGCAGAAGCTAGCGG CGGCGGCGGCGGCGGTGGCCGCCGCAACCGTCGAGATGTGGGCGCCGCCGTCACCGGGCT TTCCGCTCTCGTGCGCTCAATCTCCGGTGCTGCACGTGAGCTGTTCGATGTAATGGCCGT GTGATGCGCCGACAAGCACCGTCGCCGGAGGTCACCTCCTCCTCCTCTTTCTGATGGAAT ATTCGCCATCGCGCCTGTCTAGAAGAAGGATGATGAAGAGAGTCTGATGAAATGTGTAAA GTTGCAAGCTCTCTTCACCTTTAGCTCCTTCACTTGTCTCGGAGAAATACGTTAACCAAT TTACAATATAAAGGAGCAACATGGCTATGGATACCATCCACTTCGGTCTTTATTAATGAT CCATCTTTATCTCCAGCAAGTTCCTTTGATCCAAGCATAAGGTGCATTTAAAAAAAAATC AGCAACACTGCAGATTTGATATACAAGAATTGGATTGGTACAGAAGATCGATCTTTGATT ATTACAACTATACTTCACTGAAATACTGAAGTCAAACCGCACAAAGAGAAATGGCAGAAA TTATCGTTCTTTTTGTCATAAAAAAGATAGGAATAGCTGTGGCAGGTGAAACACTGAAGC TAGCTAAACCCTTGCTTGCAAACAAAACCGAGTTAAAGAAAGCTGAGCTAGTAACAGCAC TTCCAGTTAACATGAAACTGATAAAAGATGAACTTGAGGTTATCAATGCATTTCTGAAGG AACTTGGCATGAATGGATGCAAAGGTGAAGTTGTAGAAACTTGGGTAAGGCAAGTACGGA GGTTGGCGCATGATATGGAAGATGTTGTGGATGAGTTTATGTATGTTATTGGCAAAAACA AAGAGAGAGAGTCACGAGCTTATGTGAAGAAAATTATCAAGAAACCTAAACCTTTATTTT CACTTGATGAAATTGCTACTAAAGCAGATAGGATAAACAGACAGCTTATGGAGCTTTCTA AAAGACTAGGACGTTGGACCCAACCGATATTGAGTGGGGGTAGTATTCCTGCAACAAAAT ATGACACTGAACAACAACAGTTGTATCTACCTGGACATGATTATTCAATTACTGATGCTG AGCTTGTAGGAATTGATAAAAATAGACAAACCTTGATTGAATCATTGTGTTTGGAAGATT GTTCTCTTCGGATCATTGCTGTCTGGGGCATGGGTGGCCTTGGGAAAAGCACTCTTGTCA ACAATGTCTACAAAAAAGAAGCAACAGTATCCAATTTCAATTACCGTGCATGGCTTTCTA TCTCTCAGTCATGTAGAGTACTTGATATTTGGCGAAACATGCTGAAAGAGCTCTGTGGAA AAGAAAGCAGAGAGTTTGATGCTGAAAATATGAGCAGTACAGAACTAAAAGTGGAATTAA CTAAAATTCTGGATCAAAAGCGGTACTTGATCATATTGGATGATGTCTGGTTGGCTACAG ATTTTTTAAAGATTAGAGAGGTTCTTGTTGATAATGGCCTAGGAAGCAGAGTAATAATCA CAACAAGAATTGAGGAAGTTGCTTCCATAGCTGAGAATGGTTGTAAGATCAGTTTAGAGC CTCTAGATAACCATGATGCATGGCTTCTCTTCTGTAGGAAAGCATTTCCAAAAATTGAAG ATCATATATGCCCTCCAGAATTAGAGCAGTGTGGTATGGACATTATCGATAAATGTGACG GTTTGCCTTTAGCTCTTGTGGCAATAGGGAGTTTATTGTCCTTCAAATCAAAGAATAATA AAGATTGGAGGCTTTTCTACAATCAACTTATTTCAGAGGTACACAATAATGAGAACTTAA ACCGGGTGGAGAAAATTCTAAATCTAAGCTACAAGCACCTGCCAAACCATCTGAAGTATT GTTTCTTATATTGTGCTATGTTCCCAGAAGATTATCTGATTCACAGAAAGAGATTAATTA GACTGTGGATCAGTGAAGGATTTATAGAACAAAAAGGAGCATGCAGCTTAGAAGATGTCG CTGAAGGTTACCTAGCAGAGCTTGTCCAACGAAGCATGCTTCAAGTTGTAGCATGTAACA GTTTTGATAGGGTTCAGTGTCTTCGAATGCATGACATTGTGCGTGAATTAGCCATTTTCC AATTGAAGAAAGAAAGTTTCTGTACAATTTATGATGACACTCATGGAGTGGCACAAGTGG GATTAGACTCTCGTCGTGTCTCGGTGCTTCGATGCAACAATGATATTAGATCAAGCATAG ATCCATCCAGGCTTCACACCTTCATAGCATTTGACACCACCATGGCATTATCTTCATGGT CTTCTTTCATTTTCTCAGAATCTAAGTACCTTAATGTATTAGACTTGTCAGGCTTGCCTA TTGAGACTATTCCATATTCAGTTGGGGAGCTGTTTAACCTTCGGTTTTTGTGTCTCAACG ACACCAATGTGAAGGAATTCCCAAAATCTGTTACGAAGCTTAGCAATTTACAAACATTGA GCCTTGAACGTACCCAGTTGTTGAATTTCCCACGAGGGTTTTCAAATCTAAAGAAATTGC GCCATCTGCTTGTTTGGAAGTTAGTAGATGCTACATACAAAAGTCTGAATAACTGGGAAT CTATGGAGCCATTTGAGGGCTTGTGGGACTTGAAGGAATTGCATTATTTGAATGAGGTTC GTGCAACTAAAGCCTTTGTTTCAAATCTAGGAAATTTATCCCAGCTGAGGAGCCTCTGCA TTACTTATGTAAGGAGTAGTCACTGTGTGCAATTGTGCAACTCTTTATCAAAGATGCAAC ATCTCACAAGATTAAACATAAGAGCACGCAATGAAGATGAGCTGCTCTTGCTGGATGATT TCACATTGTCAAACCCTCTCGAAAAGCTTGAACTGGTAGGCCAGTTGTCAGAAGGAACCT TGGAATCTCCCTTTTTCTCTATTCATGGATATAAACTCCTGCAAATTGAACTTTCATGGT GTAAGCTCACAGTGAATCCAGTGGCCCGCCTTGCAGAGTTCTCGGATTTAACCGAGTTAC GTCTTACAAGGGTGTACACTGGGCCTTGGCTGTACTTTCCTGCAAACTGGTTCCCGAAAT TAAAGAAAGCCGTCTTGTGGGATTTGCAGCAAGTGAAGCAAATATTTATACAGGAGGGAG CTCTGGCCAACCTGCATTATCTTCACATCGATAGCCTCATGGAACTACGTGACATCCCTG TCGGTATTGAGTTTCTCAGTTCAGTGAAAGAGGCATATTTTACCAGGATGCATTCTGATT TTGTAAGGAATTTACGAACAGGAAAGATAAGCCATATCCCGAAGGTCCACTGGTCAACAC AAGGGGTGTCCACGGATCTCACTGGACTTGCTAATCTGCCTGGAGCATCCAACATGACCA ACACAAACCCAGAATGGCGCATCTTAGGTGGATCAGGCTGGGTTTTCATCTAATCCAATT TGCGGAGCTAGGTTGCTGGTTCGACACTTCGACCTGACAACAGTGCATAACCATTTCCCT CTGCTGCAATGTTTGTGTACACCTGGTTCACTGAAGTAAACACTGGAGCTGAATCGGTGC TGCACTTCCACTCTGATTTAGTATTTGGAAGCAAAGCTTTCTGAGCAACTCAGAAACTTC TTTCTGCGACCACGCCTTGTTTCCTCCACTGGATGGTAGCATCAAGAATTCCAGATGATT GTTGCAAGAAGAGATCACGCTACCTGCTGCATGCCGATTTACAGGAAGATAACTACTAAA TAGAAGATTGATACATTCAGAAAATTATCGTGTTATTATCCCATATTTAGCATTGCAAAT AACGTTCTCGCTCTTTTTTTTTTCGCTCCGACCATTTTCTGGTCAAGATGATTATGCGAG ACGAAGTGTAGCGTCCGAAATGGACTACCCATATTTGTAGATGCATCAGTCTATCACCAT TCACTCACCAAAATGAACTGAACCATTTGGTGTTTATCTGAAATAATTTACGTAGCTGGT CATGTTTGGACTGTACGTCAAATCAAAATATTACAATGGCTGATATTTGCTTTC