Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0478300-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:18316004:18322383:-1 gene:Os09g0478300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE E6 description:Similar to Cellulose synthase-like protein E6. (Os09t0478300-01)
Sequence	ATGGAGACGACGACGACGGAGAGGCGGCGGCTGTTCGCGACGGAGAAGGTGGGCGGCAGG GCGGTGTACAGGCTGCAGGCGGCGACGGTGGCCGCCGGGATACTGCTGGTGCTCTACTAC AGGGCGACGCGCGTGCCGGCCGCCGGCGAAGGGCGGGCGGCGTGGCTGGGGATGGCGGCG GCGGAGCTCTGGTTCGCCGTCTACTGGGTCATCACGCAGTCCGTCCGGTGGTGCCCCGTC CGCCGCCGCACCTTCAAGAACAGGCTCGCCGAGAGATACAAAGAAAATCTACCTGGTGTG GATGTTTTTGTATGCACTGCAGACCCACACGCAGAGCCACCAAGCCTTGTCATCTCTACC ATCCTATCAGTCATGGCATACAATTACCCATCAGAAAAAATAAGTGTGTATCTTTCTGAT GATGGTGGTTCAATTCTTACTTTCTACGCTCTATGGGAGGCATCCATGTTTGCAAAGAAA TGGCTACCATTCTGCAGAAGATATAACATTGAGCCAAGGTCCCCAGCTGCTTACTTCTCG GAATCAGAAGGGCATCACAATCTGTGCTCCCCAAAAGAATGGTCATTTATCAAGAACCTG TATGAAGAAATGAGAGAGAGAATTGATTCGGCTGTCATGTCAGGAAAAATTCCTGAAGAA ATTAAACTAAAGCATAAAGGATTTGATGAATGGAACTCGGAAATGACCTCAAAAAATCAC CAGCCAATTGTTCAGGTTCTGATAGATGGGAAAAGCCAAAATGCAGTTGATGACGACGGA AATGTGCTACCAACACTGGTATACATGGCGCGCGAGAAGAGCCCTCAGTATCACCATAAC TTCAAAGCCGGGGCATTGAACGCTTTGATAAGGGTATCAGCACTGATAAGTGACAGCCCT GTTATCTTGAATGTGGACTGTGACATGTATTCCAACAATAGTGATTCAATCAGAGATGCG TTGTGCTTCTTCCTTGATGAAGAAATGAGCCACAAAATTGGATTTGTCCAGTATCCTCAG AACTACAACAATATGACCAAAAATAATATATATGGGAACTCTCTCAATGTTATCAATCAT GTGGAGATGCGTGGTTTGGACAGTGCTGGTGGATGTCTCTATATTGGCACAGGATGCTTC CATAGAAGAGAGATCCTTTGTGGTAAGAAATTCAGCAAAGATTACAAGGAAGACTGGGGC AGAGGAATAAAGGAAAGAGGACATGAGAACATAGATGAGATTGAAGAGAAGGCAAAATCT TTAGCAACCTGCACTTATGAACTTAGGACACAATGGGGCAATGAGATTGGAGTGAAATAT GGTTGCCCAGTAGAGGATGTCATCACTGGATTGGCAATACATTGCCGAGGATGGGAGTCA GTCTACATGGAACCTCAAAGGGCAGCATTTGTGGGTGTAGCTCCAGCAACACTTGCCCAG ACAATACTGCAACACAAGAGATGGAGTGAGGGCAATTTCACAATTTTTCTTTCAAAGCAC AACACCTTCCTGTTTGGACATGGAAAAATCAGCTTGCAGTTACAGATGGGCTACTGCATA TATGGATTATGGGCAGCCAATTCACTGCCTACAATCTACTATGTTATGATTCCAGCACTA GGTCTTGTCAAAGGCACTCCCCTATTTCCAGAGATTATGAGTCCATGGGCTACACCCTTC ATATATGTATTTTGTGTGAAGACCCTCTACAGTCTTTATGAGGCATTATTATCTGGGGAT ACATTGAAAGGATGGTGGAATGGACAAAGGATGTGGATGGTGAAAAGAATTACCTCATAT CTATATGGCTTCATTGACACCATCCGAAAATTGTTAGGATTGTCAAAGATGTCATTTGAA ATTACAGCAAAGTTGCAGGGCTAA

Peptide Sequence

PEP ID	Os09t0478300-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:18316004:18322383:-1 gene:Os09g0478300 transcript:Os09t0478300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE E6 description:Similar to Cellulose synthase-like protein E6. (Os09t0478300-01)
Sequence	METTTTERRRLFATEKVGGRAVYRLQAATVAAGILLVLYYRATRVPAAGEGRAAWLGMAA AELWFAVYWVITQSVRWCPVRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVIST ILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYFS ESEGHHNLCSPKEWSFIKNLYEEMRERIDSAVMSGKIPEEIKLKHKGFDEWNSEMTSKNH QPIVQVLIDGKSQNAVDDDGNVLPTLVYMAREKSPQYHHNFKAGALNALIRVSALISDSP VILNVDCDMYSNNSDSIRDALCFFLDEEMSHKIGFVQYPQNYNNMTKNNIYGNSLNVINH VEMRGLDSAGGCLYIGTGCFHRREILCGKKFSKDYKEDWGRGIKERGHENIDEIEEKAKS LATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPATLAQ TILQHKRWSEGNFTIFLSKHNTFLFGHGKISLQLQMGYCIYGLWAANSLPTIYYVMIPAL GLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVKRITSY LYGFIDTIRKLLGLSKMSFEITAKLQG

Transcript Sequence

Transcript ID	Os09t0478300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18316004:18322383:-1 gene:Os09g0478300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CELLULOSE SYNTHASE LIKE E6 description:Similar to Cellulose synthase-like protein E6. (Os09t0478300-01)
Sequence	AATTGGATTTTGTTGGGATCCAATCCACGCCACCGAGTCCTTCGTTGTCCGGAGAAGACG GGAGAGGCAACTGCCACGGTCACCGACTCATCGTCCCATGCCATGTTGAATCCAATGGCA GCCGTGTCATCGTCGTCCTCCTCCGTCTTCAAGCAGTGGATCGAGAGCTGTCGTCGCTCG ATATAGGGCCAGCGCCACCTGATCGAGGGCTAGTGTCGCCGGGAGGTACATGCTAGCTGA ATCTGGCGGCGGGGTGCCCGTCAACCTCAATCCCTCGCCCTTCTTCTCCCTCCAAGGTGC CCTCTCCCCTTCCTCATCAGCGTCCTCTGCTCTTCATGAGAGGGGAATGCCCATTGTGGA GAGGCTCGGCATCCTCGGCGCCGCCTGAGGGAACCGCTGTCCACTACTGTTGTCGCCAAA ACACCACCGAGCAACGGGGGTCGCCTTGGCTTCTTCCTTGCCATTCCCTAGGTTCTTCGC TGCCGCGTCGATCGGTTTCTTCCTCACCTCGACCCGAGCTCGCTGCGTGCCGGCTAGGGA AGGAGGAGAGGAGGGGCAGCACGGTGGCAGCTGGTAGAGGGGCTGGCCTGCCGAAGAAAC CGAGGGGAAGGGAAAGTGGAGAGGAGGGTCTTTTTTTTTCCTTTTCTACTATTTTTTTAT CAGCTGTCCTCCGCATTCCTTTCCTTCCTTAAATTCCCATGTGCAGGAGTACTACGCAAT AAGGAAAGACAACATACAATTCACCTAATTCTTCACTTAGACTAAATATGTACTTAATTA ACTTAATAAGCTAGAAATACAATTTATTTTCCGTTGCAACGCACAAACTCTTGGCTAGTA TCCAAAAATTATATAGAAACAAAGTGTAAAGGACCATCAATCCAAAGACACTCAATAATC GTCTCCCATACATTTGGTCCTGGATAAAACACTCCCTGACCACGTGCTCCAGTGGCTGAC ACAGCACCACAACCAAATCTCATCAACCTGGCTTCTAAAGATATATGCTATATAAAATAT ATTCTAGTAAAAAACAATTTATATAGTATGACGTTATATATGCACATATCTGTGCATCAG AATTGGTTAGTCCATTTTGTCAGCTAGTGATCGATCGAGCTATATATGCATATATTACTA CGGATCCTATGCTAGCGAAGATCGAGCTCACTACACAGAGAGAGTAGCTAGTTAGCCGCC GGCGATGGAGACGACGACGACGGAGAGGCGGCGGCTGTTCGCGACGGAGAAGGTGGGCGG CAGGGCGGTGTACAGGCTGCAGGCGGCGACGGTGGCCGCCGGGATACTGCTGGTGCTCTA CTACAGGGCGACGCGCGTGCCGGCCGCCGGCGAAGGGCGGGCGGCGTGGCTGGGGATGGC GGCGGCGGAGCTCTGGTTCGCCGTCTACTGGGTCATCACGCAGTCCGTCCGGTGGTGCCC CGTCCGCCGCCGCACCTTCAAGAACAGGCTCGCCGAGAGATACAAAGAAAATCTACCTGG TGTGGATGTTTTTGTATGCACTGCAGACCCACACGCAGAGCCACCAAGCCTTGTCATCTC TACCATCCTATCAGTCATGGCATACAATTACCCATCAGAAAAAATAAGTGTGTATCTTTC TGATGATGGTGGTTCAATTCTTACTTTCTACGCTCTATGGGAGGCATCCATGTTTGCAAA GAAATGGCTACCATTCTGCAGAAGATATAACATTGAGCCAAGGTCCCCAGCTGCTTACTT CTCGGAATCAGAAGGGCATCACAATCTGTGCTCCCCAAAAGAATGGTCATTTATCAAGAA CCTGTATGAAGAAATGAGAGAGAGAATTGATTCGGCTGTCATGTCAGGAAAAATTCCTGA AGAAATTAAACTAAAGCATAAAGGATTTGATGAATGGAACTCGGAAATGACCTCAAAAAA TCACCAGCCAATTGTTCAGGTTCTGATAGATGGGAAAAGCCAAAATGCAGTTGATGACGA CGGAAATGTGCTACCAACACTGGTATACATGGCGCGCGAGAAGAGCCCTCAGTATCACCA TAACTTCAAAGCCGGGGCATTGAACGCTTTGATAAGGGTATCAGCACTGATAAGTGACAG CCCTGTTATCTTGAATGTGGACTGTGACATGTATTCCAACAATAGTGATTCAATCAGAGA TGCGTTGTGCTTCTTCCTTGATGAAGAAATGAGCCACAAAATTGGATTTGTCCAGTATCC TCAGAACTACAACAATATGACCAAAAATAATATATATGGGAACTCTCTCAATGTTATCAA TCATGTGGAGATGCGTGGTTTGGACAGTGCTGGTGGATGTCTCTATATTGGCACAGGATG CTTCCATAGAAGAGAGATCCTTTGTGGTAAGAAATTCAGCAAAGATTACAAGGAAGACTG GGGCAGAGGAATAAAGGAAAGAGGACATGAGAACATAGATGAGATTGAAGAGAAGGCAAA ATCTTTAGCAACCTGCACTTATGAACTTAGGACACAATGGGGCAATGAGATTGGAGTGAA ATATGGTTGCCCAGTAGAGGATGTCATCACTGGATTGGCAATACATTGCCGAGGATGGGA GTCAGTCTACATGGAACCTCAAAGGGCAGCATTTGTGGGTGTAGCTCCAGCAACACTTGC CCAGACAATACTGCAACACAAGAGATGGAGTGAGGGCAATTTCACAATTTTTCTTTCAAA GCACAACACCTTCCTGTTTGGACATGGAAAAATCAGCTTGCAGTTACAGATGGGCTACTG CATATATGGATTATGGGCAGCCAATTCACTGCCTACAATCTACTATGTTATGATTCCAGC ACTAGGTCTTGTCAAAGGCACTCCCCTATTTCCAGAGATTATGAGTCCATGGGCTACACC CTTCATATATGTATTTTGTGTGAAGACCCTCTACAGTCTTTATGAGGCATTATTATCTGG GGATACATTGAAAGGATGGTGGAATGGACAAAGGATGTGGATGGTGAAAAGAATTACCTC ATATCTATATGGCTTCATTGACACCATCCGAAAATTGTTAGGATTGTCAAAGATGTCATT TGAAATTACAGCAAAGTTGCAGGGCTAAGCAAAATAATGGCAGGTGTGTGGAATGTGTTT TTACCCCAGGTCATTCTATGTGGACTGATAGTGATCACTAATATCCCAATTTATGAGGCA ATGTTTGTGAGAAAGGATAAGGGGAGAATACCATTACCAGTCACACTAGCTTCAATTGGC TTTGTAATGTTGGCATTCCTGTTACCAATAGTTTGAGGTCCTAAAATGGGAAGCGATGCC TTGTAAAATGATTATGGAAATAAATTGCACTGCCTTTTCTTTC