Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0476100-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:18242949:18245317:-1 gene:Os09g0476100 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif, glycine rich protein domain containing protein. (Os09t0476100-01);Non-protein coding transcript. (Os09t0476100-02)
Sequence	ATGGATCCCGACGGCGACGGCTCGTTCCACCGCAACGAGGCCATCTCCGCCGTCCAGGAC GTCGACCAGTACTATGGCGACGACGACGACTACGACGACCTCTACAACGACGTCAACGTC GGGGACGGCTTCCTCCAGTCGTCTCACCCGCCGCCCCAGCCCCCGCCCCCGCCGCAGCAG CAGCAGCAGCCGCCGCCGATTTCGCAGCAGCCGCCTCCGTTGCAGGCGCCACCGCCGCCG CCGCAGCAGCAACAGCAGCAGCAGCAGCTGCAGGCGCCCCCTTCGCTCCCGCCGCCGCCT CCGCAGCGGCAGCCGGAGAAGGTGCACATCCCGGGCGTCGCGGCTGTCCCCCCCGCCCCC GTTCCCGACCGGCCCAACCCGGTCCACCTCCCGCCGCAGCCGCAGCCACCGGTGGCCGCC GCGCCTCCGCCGCCTCCGCATAACCAGATCCAGCCGGGAGGAGGCGACGGCTTCCACCGC CAGGGTGGGGGAAACTACGGTGGGGGCCCGATTGTGGTCGGCAACGGCGGGGGTGGTGAT GGCCCCGGTGGTACGACCCTCTTCGTAGGGGAGCTCCACTGGTGGACCACGGACGCCGAT CTAGAGGCAGAGCTAAGCAAGTACGGGCAGGTCAAGGAGGTGAGATTCTTCGACGAGAAG GCGAGCGGCAAGTCCAAGGGATACTGCCAGGTTGATTTCTATGACCCTGGCGCTGCTGCC TCTTGCAAAGAGGGCATGAACGGCCACTTGTTCAATGGACGCCCCTGTGTCGTGGCCTTC GCCTCGCCTCACACCGTGCGCCGCATGGGTGAAGCTCAGGTGAAGAACCAACAATCGATG GCTCAGCAAAACTCGGGTGTGCAGAAGGGTGGTAGAGGTGGTGGTGCAGCTGGAGGTCCG GGTGGAGCTCAGGTGGGTGGGAATTATGGTGGTGGTCGTGGAGGCGGAGGAGGTGGACCG GGTGGTGGCGGAGGTGGAGGCGGCGGTGGAAATTGGGGAAGGGGTGGCGGGGGTATGGGG GGTAGAGGCCAAGCTGGGAATATGAGGAATCGGATGGGTCCGGTTGGTGGACGTGGATTA ATGGGGAACGGAGGGATGGTAGCTCCACCACCACCTATGCTTCATCCTGGAGGCATGTTA GGGCAGGGTTTTGATCCAACTGGCTATGGTGCAGCAATGGGGAGGATGGGTGGTGGGTTT GGTGGCTTCCCTGGAGGACCTGGGGCTGCTCCATTCCCAGGCTTAATGCAGCCATTCCCA CCTGTTGTTGCACCTCATGTAAACCCAGCGTTCTTTGGAAGAGGAGGTGGTATGGGTGCT GGTGGGGTCGGGATGTGGCCAGACCCGAGCATGGGTGGTTGGGGTGGGGAAGAGCAATCA AGCTATGGCGACGATGCAGCATCAGATCAACAATATGGTGAAGGTGGGAGCCATGGTAAG GAGAGGCCACCAGAGAGGGAATGGTCAGGGGCATCTGATAGGAGGCGGGAGAGGGAGAAA GATTTGCCTCCTCCACCAGACTGGCCAGAGAGGAGGCACCGTGATGAACGGGACGCAGGT CGGGAGAGGGAGAGGGAGAGAGACAGGGACAGGGAAAGGGAAAGAGACCGAGACAGGGAA CGGGAAAGGGAAAGAGATCGAGACAGGGAGAGGGAACGGTACCGGGATGATAGAGATCGC CATGGCGATTATCATAGGCACGGGAAGCGTGAGTCGGATCGTAATGAAGACTGGGATAGG GGAAGATCATCTGGGAGGCGTAGCAGATCAAGGGAGGTTGACCACTCAAAGCGGCGGCGG ATGTCGCCTGAGTAA

Peptide Sequence

PEP ID	Os09t0476100-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:18242949:18245317:-1 gene:Os09g0476100 transcript:Os09t0476100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif, glycine rich protein domain containing protein. (Os09t0476100-01);Non-protein coding transcript. (Os09t0476100-02)
Sequence	MDPDGDGSFHRNEAISAVQDVDQYYGDDDDYDDLYNDVNVGDGFLQSSHPPPQPPPPPQQ QQQPPPISQQPPPLQAPPPPPQQQQQQQQLQAPPSLPPPPPQRQPEKVHIPGVAAVPPAP VPDRPNPVHLPPQPQPPVAAAPPPPPHNQIQPGGGDGFHRQGGGNYGGGPIVVGNGGGGD GPGGTTLFVGELHWWTTDADLEAELSKYGQVKEVRFFDEKASGKSKGYCQVDFYDPGAAA SCKEGMNGHLFNGRPCVVAFASPHTVRRMGEAQVKNQQSMAQQNSGVQKGGRGGGAAGGP GGAQVGGNYGGGRGGGGGGPGGGGGGGGGGNWGRGGGGMGGRGQAGNMRNRMGPVGGRGL MGNGGMVAPPPPMLHPGGMLGQGFDPTGYGAAMGRMGGGFGGFPGGPGAAPFPGLMQPFP PVVAPHVNPAFFGRGGGMGAGGVGMWPDPSMGGWGGEEQSSYGDDAASDQQYGEGGSHGK ERPPEREWSGASDRRREREKDLPPPPDWPERRHRDERDAGRERERERDRDRERERDRDRE RERERDRDRERERYRDDRDRHGDYHRHGKRESDRNEDWDRGRSSGRRSRSREVDHSKRRR MSPE

Transcript Sequence

Transcript ID	Os09t0476100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18242949:18245317:-1 gene:Os09g0476100 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA recognition motif, glycine rich protein domain containing protein. (Os09t0476100-01);Non-protein coding transcript. (Os09t0476100-02)
Sequence	GCGCTCTCTCCCCTCTCTTCTAGATCCAGCCCTCCCCTCCTAGGGTTTGGCTCCGCCGCC CGCCGCCATGGATCCCGACGGCGACGGCTCGTTCCACCGCAACGAGGCCATCTCCGCCGT CCAGGACGTCGACCAGTACTATGGCGACGACGACGACTACGACGACCTCTACAACGACGT CAACGTCGGGGACGGCTTCCTCCAGTCGTCTCACCCGCCGCCCCAGCCCCCGCCCCCGCC GCAGCAGCAGCAGCAGCCGCCGCCGATTTCGCAGCAGCCGCCTCCGTTGCAGGCGCCACC GCCGCCGCCGCAGCAGCAACAGCAGCAGCAGCAGCTGCAGGCGCCCCCTTCGCTCCCGCC GCCGCCTCCGCAGCGGCAGCCGGAGAAGGTGCACATCCCGGGCGTCGCGGCTGTCCCCCC CGCCCCCGTTCCCGACCGGCCCAACCCGGTCCACCTCCCGCCGCAGCCGCAGCCACCGGT GGCCGCCGCGCCTCCGCCGCCTCCGCATAACCAGATCCAGCCGGGAGGAGGCGACGGCTT CCACCGCCAGGGTGGGGGAAACTACGGTGGGGGCCCGATTGTGGTCGGCAACGGCGGGGG TGGTGATGGCCCCGGTGGTACGACCCTCTTCGTAGGGGAGCTCCACTGGTGGACCACGGA CGCCGATCTAGAGGCAGAGCTAAGCAAGTACGGGCAGGTCAAGGAGGTGAGATTCTTCGA CGAGAAGGCGAGCGGCAAGTCCAAGGGATACTGCCAGGTTGATTTCTATGACCCTGGCGC TGCTGCCTCTTGCAAAGAGGGCATGAACGGCCACTTGTTCAATGGACGCCCCTGTGTCGT GGCCTTCGCCTCGCCTCACACCGTGCGCCGCATGGGTGAAGCTCAGGTGAAGAACCAACA ATCGATGGCTCAGCAAAACTCGGGTGTGCAGAAGGGTGGTAGAGGTGGTGGTGCAGCTGG AGGTCCGGGTGGAGCTCAGGTGGGTGGGAATTATGGTGGTGGTCGTGGAGGCGGAGGAGG TGGACCGGGTGGTGGCGGAGGTGGAGGCGGCGGTGGAAATTGGGGAAGGGGTGGCGGGGG TATGGGGGGTAGAGGCCAAGCTGGGAATATGAGGAATCGGATGGGTCCGGTTGGTGGACG TGGATTAATGGGGAACGGAGGGATGGTAGCTCCACCACCACCTATGCTTCATCCTGGAGG CATGTTAGGGCAGGGTTTTGATCCAACTGGCTATGGTGCAGCAATGGGGAGGATGGGTGG TGGGTTTGGTGGCTTCCCTGGAGGACCTGGGGCTGCTCCATTCCCAGGCTTAATGCAGCC ATTCCCACCTGTTGTTGCACCTCATGTAAACCCAGCGTTCTTTGGAAGAGGAGGTGGTAT GGGTGCTGGTGGGGTCGGGATGTGGCCAGACCCGAGCATGGGTGGTTGGGGTGGGGAAGA GCAATCAAGCTATGGCGACGATGCAGCATCAGATCAACAATATGGTGAAGGTGGGAGCCA TGGTAAGGAGAGGCCACCAGAGAGGGAATGGTCAGGGGCATCTGATAGGAGGCGGGAGAG GGAGAAAGATTTGCCTCCTCCACCAGACTGGCCAGAGAGGAGGCACCGTGATGAACGGGA CGCAGGTCGGGAGAGGGAGAGGGAGAGAGACAGGGACAGGGAAAGGGAAAGAGACCGAGA CAGGGAACGGGAAAGGGAAAGAGATCGAGACAGGGAGAGGGAACGGTACCGGGATGATAG AGATCGCCATGGCGATTATCATAGGCACGGGAAGCGTGAGTCGGATCGTAATGAAGACTG GGATAGGGGAAGATCATCTGGGAGGCGTAGCAGATCAAGGGAGGTTGACCACTCAAAGCG GCGGCGGATGTCGCCTGAGTAATGTATCTGGATGGGCTATGTTTAGTGTAGGGGTATCGG CAATTCGCGGCGGCATCTTTTTTGCACATGCCTTTTGGTTAGCGAATCAGCTTGCAACTG TCAACTGTTTACTGCTTATAACATCGGTGGATTTTACCTGCTTGTCTCCAAGGATCTGTT GTAGCATTAATTGAGATGTAAGTTCTTAATCTGTTCTCCTTTTTTATGTAAATATTCTTT TTTTTTGTCGTTGTATACCTGTATATAATTTCTTGTTGGATACTAGTGTATAGCATCATA TTCATGTAACCTCATCATGTATACCAGTTTTTGTTGTGTATAGTTATTCTTTTTTCCATT TATTCTTTTGTAGCATAAAGGAATTGCTCAAGCCGAGAATGTAATTAGTTTTGTATGCTT AACATGTAACTATAGCGCTGTAGGAAGCAAACCTTTTTGTAATCCATTTGCTGATTATAT GTATTCTCAAACAAAAATGTAAAGGTTCC