Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0475400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:18207621:18214963:1 gene:Os09g0475400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 032 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0475400-01);Similar to cDNA clone:J023084K14, full insert sequence. (Os09t0475400-02)
Sequence	ATGGGCATCCAAGGGAACAAGGCGACGACGCGCGAGCACGACTTCCTCTCGCTGTACACC ACCGCCGCTAAGGATCCGTCTCTCCAGCTCCACGACGCCAAGCCGCCGCCTCCTTCCCAA GGTTTCTTCCTGAGGACGCACGACTTCCTGCAGCCGCTGGAGAAGCCGACGCCGGCGCCG ACGCCGCCTCCGACGAGCCAGCTGCAGCAGCAGCAGCAGCAAGCGTTCCCCGGCGGCATC GGAACGTTCAGCATCAGCCACGTCGCCGGCGCACGCCCGGTCGCGGCTGCCGTCGTCAAG GCCGAGCCGACGCCGTTCGTTCTCTGGGGCCAGCCCGCCGCCGCCGCCGCCGCGCACCCG GTCGCCGCACTAGGGCACCACCACCACCACCACCAGTGGACGCTCCCCTTCGCCGGCGTC GGGCAGGTGGCCGCCACCGCGGCGAGGCAGCAGCAGGAGTGGAAGGGGCGAGTCGGGGGA GGCGGGTTCATGGACTCTGGCTCCAGATCCAGTGGCGGCGCCGGGTTCGACGACGACGAT GGCGTGGCCGCGCGGCGTGAGGTCTCGTCCTCGCTCAAAGAGTTGACAGTGAGGGTGGAT GGGAAGGGTGGGAGCTGCAGTGGAAGTGGTACTGATCAGCGGCCCAGCTCACCACGTTCA AAGCACTCTGCTACCGAGCAGCGTCGGCGCAGCAAGATCAATGACAGGTTTCAGATACTT AGGGAGCTGTTACCTCATAGCGACCAAAAGAGAGACAAAGCAACATTTCTGTTAGAGGTT ATTGAATACATACGCTTTTTGCAAGAGAAAGTGCAGAAGTTTGAAGCTTCAGTCCCTGAA TGGAACCAAGAAAATGCAAAGATACTTCCATGGTCAAACATATATTTTAGATCGTTCTGG AAAAATTCACAAAGTAAAGGTCAGAACCCTGGAGATGATTTGCCTGATCCTTCACAGTTC ATCCGGAATGGGTCCTCTTCTGGGTATAATTTCACTGGCAAACCTGATGATAACCACAAC ATGGTGACATCAGCAGCTGCCTCAGGGGCACAAGAACTGGTGGAAACTGACCATGCAGCT AGCGTGTCCTACAGATCAGCAGAAACTCCGACAAACATTACCAACAATGTTACATCCCAA GCCCAAGCCCAGTGGGCTAGTCCGGCTGGTGTGGATGACTGTGCAATGAACAGCGAAATG TTAAATAACCAACAGTTGGCAATTGATGAAGGAACAATAAGCTTGTCAAGCCAATATTCC CAACAGCTACTTGGTACGTTGACTCATGCCCTTGAAAGCTCAGGTGTTGATCTGTCCCAA TCCAGCATATCTGTGCAGATCAACCTTGGCAAGCGAGCTGTTAAGAGACCTGGTGCTGAT GGATCCTCCAGTTCTAAGGAGCTCCCCAGTACATCAGCGAACAACGAAAACATGGGTCAC CAGCTGACGATGTTAGGGGGTGGTACTGAAGAACTTCCACACCCAACGAAGCGCCATAAA TCGGGCAACAGCTGA

Peptide Sequence

PEP ID	Os09t0475400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:18207621:18214963:1 gene:Os09g0475400 transcript:Os09t0475400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 032 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0475400-01);Similar to cDNA clone:J023084K14, full insert sequence. (Os09t0475400-02)
Sequence	MGIQGNKATTREHDFLSLYTTAAKDPSLQLHDAKPPPPSQGFFLRTHDFLQPLEKPTPAP TPPPTSQLQQQQQQAFPGGIGTFSISHVAGARPVAAAVVKAEPTPFVLWGQPAAAAAAHP VAALGHHHHHHQWTLPFAGVGQVAATAARQQQEWKGRVGGGGFMDSGSRSSGGAGFDDDD GVAARREVSSSLKELTVRVDGKGGSCSGSGTDQRPSSPRSKHSATEQRRRSKINDRFQIL RELLPHSDQKRDKATFLLEVIEYIRFLQEKVQKFEASVPEWNQENAKILPWSNIYFRSFW KNSQSKGQNPGDDLPDPSQFIRNGSSSGYNFTGKPDDNHNMVTSAAASGAQELVETDHAA SVSYRSAETPTNITNNVTSQAQAQWASPAGVDDCAMNSEMLNNQQLAIDEGTISLSSQYS QQLLGTLTHALESSGVDLSQSSISVQINLGKRAVKRPGADGSSSSKELPSTSANNENMGH QLTMLGGGTEELPHPTKRHKSGNS

Transcript Sequence

Transcript ID	Os09t0475400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18207621:18214963:1 gene:Os09g0475400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 032 description:Helix-loop-helix DNA-binding domain containing protein. (Os09t0475400-01);Similar to cDNA clone:J023084K14, full insert sequence. (Os09t0475400-02)
Sequence	GCCCGCTGCTGGTAGAGGAGAAGGCGAAGCCAAGCCAAGCGAAGCCAAGCAAAGGGAAGC GAAGCGGAGAAAAGCTTGTCTTGTAGAGAGGAGGGGTCTCTCGTCGTCTCGCGTCGGAAT TCTCGCGTTGTGGCCGCGGCATGATTGGTCCGGCGAGCGATCGCGGCGAGTCGGCAGCGG CGGCGGCCGGGAGGCGGTGGGATTGATCAGCGAGCTACAATTATGGGCATCCAAGGGAAC AAGGCGACGACGCGCGAGCACGACTTCCTCTCGCTGTACACCACCGCCGCTAAGGATCCG TCTCTCCAGCTCCACGACGCCAAGCCGCCGCCTCCTTCCCAAGGTTTCTTCCTGAGGACG CACGACTTCCTGCAGCCGCTGGAGAAGCCGACGCCGGCGCCGACGCCGCCTCCGACGAGC CAGCTGCAGCAGCAGCAGCAGCAAGCGTTCCCCGGCGGCATCGGAACGTTCAGCATCAGC CACGTCGCCGGCGCACGCCCGGTCGCGGCTGCCGTCGTCAAGGCCGAGCCGACGCCGTTC GTTCTCTGGGGCCAGCCCGCCGCCGCCGCCGCCGCGCACCCGGTCGCCGCACTAGGGCAC CACCACCACCACCACCAGTGGACGCTCCCCTTCGCCGGCGTCGGGCAGGTGGCCGCCACC GCGGCGAGGCAGCAGCAGGAGTGGAAGGGGCGAGTCGGGGGAGGCGGGTTCATGGACTCT GGCTCCAGATCCAGTGGCGGCGCCGGGTTCGACGACGACGATGGCGTGGCCGCGCGGCGT GAGGTCTCGTCCTCGCTCAAAGAGTTGACAGTGAGGGTGGATGGGAAGGGTGGGAGCTGC AGTGGAAGTGGTACTGATCAGCGGCCCAGCTCACCACGTTCAAAGCACTCTGCTACCGAG CAGCGTCGGCGCAGCAAGATCAATGACAGGTTTCAGATACTTAGGGAGCTGTTACCTCAT AGCGACCAAAAGAGAGACAAAGCAACATTTCTGTTAGAGGTTATTGAATACATACGCTTT TTGCAAGAGAAAGTGCAGAAGTTTGAAGCTTCAGTCCCTGAATGGAACCAAGAAAATGCA AAGATACTTCCATGGTCAAACATATATTTTAGATCGTTCTGGAAAAATTCACAAAGTAAA GGTCAGAACCCTGGAGATGATTTGCCTGATCCTTCACAGTTCATCCGGAATGGGTCCTCT TCTGGGTATAATTTCACTGGCAAACCTGATGATAACCACAACATGGTGACATCAGCAGCT GCCTCAGGGGCACAAGAACTGGTGGAAACTGACCATGCAGCTAGCGTGTCCTACAGATCA GCAGAAACTCCGACAAACATTACCAACAATGTTACATCCCAAGCCCAAGCCCAGTGGGCT AGTCCGGCTGGTGTGGATGACTGTGCAATGAACAGCGAAATGTTAAATAACCAACAGTTG GCAATTGATGAAGGAACAATAAGCTTGTCAAGCCAATATTCCCAACAGCTACTTGGTACG TTGACTCATGCCCTTGAAAGCTCAGGTGTTGATCTGTCCCAATCCAGCATATCTGTGCAG ATCAACCTTGGCAAGCGAGCTGTTAAGAGACCTGGTGCTGATGGATCCTCCAGTTCTAAG GAGCTCCCCAGTACATCAGCGAACAACGAAAACATGGGTCACCAGCTGACGATGTTAGGG GGTGGTACTGAAGAACTTCCACACCCAACGAAGCGCCATAAATCGGGCAACAGCTGATGG CGGTTCTCACTCTGTTGCATCATCCAGACCGATTGATCATTCTTTCCTCCCTACCAACCA GCCAGGACATTCCAGAATTGGATGTACATTATGTTAGCAGTGACGGCATCGCGTTGAACA AGGCAGACCTTGGTGTAATTCTTTCATTCAATCACTTGGCCAACCTGTTTTAAGAAAAAA AAAAGACCAAAGAAAGGCGCTTCTCATTGTGGATTGTGAAGCTGCTCTTGTACACAGGCT TCCATTCCTATGAGAAGCTCCCCCCTGACAAGACAGTCAGTCCTACGTTGTAACCTGTAT GATAACTCAGCTGCACCTGTTAGCTATGTGAAGTAGTAATTCGTTGAAGTATTCTAGATC TCTAGTGCTTCATTGCACATCACTTCTCTATCTCTGACCTATTGTGCTGATGAGTGAAGT ATTAATCCTTT