Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0474800-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:18174589:18177971:-1 gene:Os09g0474800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os09t0474800-01);Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os09t0474800-02)
Sequence	ATGTCCAGGGACTTGGATTGTCCTGTTCAGACACAGATGGCCGTTGCAGTACTGGATCGG AGCTTCAGCAGTGAATATCCTGCAAGCAGCAGAACTGAGGGGAGATCATGTAGTTGGAAA AGAGTCTTTGTCCAAACTGAAAATGGTTATGTCCTGGGCATTGAACTGGAGAGGGGAGAA AATGCACACACTGTGAAAAAGAAGCTCCAGGTAGCCCTCAAGGTACCCACAGAGGAGAGC TCACTGACCTTTGGTGATCTGGTTCTGAATAATGATCTCAGCAGTATTCGCAATGACTCA CCACTGCTCCTCAGAAAGAATCAAATGCACCGGAGCAGCTCAACTCCTTGCCTCTCTCCT ACTGCTCATGATGTGCAGGAGCAAGATCACAGCGAACCCATTGAAATCCTTGGATGTTTG AGCCCCTCTTCTCGGATGAAGCAGCTTGCTAAGGATGTTGTGGAAGCCATAAGGAATGGT GTTGACCCGGTACCTGTTAATAGTGGCATGGGTGGCGCATACTACTTCAAGAACATTTAC GGGGAACGTGTTGCAATTGTCAAGCCAACAGATGAAGAACCATTTGCTCCAAATAATCCT AAAGGTTTTGTGGGGAAGACCCTTGGACTGCCAGGCCTCAAAAGATCAGTACCGGTCGGT GAGACTGGGCTCCGAGAGGTTGCTGCTTACCTTCTTGACCATGATAACTTTGCAAATGTC CCACCCACAATGCTGGTCAAGATCACGCACTCTGTGTTCAATGTGAATGATACTGTCAGC TGCAAAAGTAAAGTCTTCCACAACAAATTGCAGGCTGTGAGCAAGCTTGCATCATTGCAG CAATTTATTGCTCATGATTATGATGCTAGTGACCATGGGACATCAAGCTTCCCTGTATCT GCAGTGCACAGGATTGGCATACTTGACATCAGAATATTCAACACGGACAGGCACGCAGGA AATCTTCTGGTTAGGAAGCTTGGACCTGGGCCTGACAATTTTGGAGTGCAGACTGAACTC ATTCCTATTGACCATGGTCTCTGTCTTCCAGAAAGTCTAGAAGACCCTTACTTTGAATGG ATTCACTGGCCACAGGCATCCATTCCTTTCACTGAGGAGGAACTCGAATACATTGCAAAT CTGGATCCTGTAAAAGATGCTGAAATGCTTCGCTTGGAGCTGCCCTTTATCCGTGGAGCA TGTCTGAGGGTGCTGGTGCTATCAACAATATTTCTCAAAGAAGCTGCAGCATTTGGCCTC TGCTTATCAGAGATAGGAGAGATGATGAGTAGGCAATTCACTGGGAAAGAAGAGGAGCCA AGTGAGCTTGAGCTTCTTTGCATGGAGGCAAGGAAGTGGGTCAAGAAAAGAGAGCTATTT CTTCCAGAAGCCGGAGTTGAAGATGACAATGATGGCATCACCCAGTTCTCTATCGACAGC GAAGATGGTTCAGATGCATCTGAATTACCATCTTTCAGCAAGTTCGGGCTCATGAATGCT AGTCACAGAAATCCACTGTCAAAGTTAGATGAGTGTGATGAGGAAGATGGTGAAGAGGAA GAGGATGATGATGGTGATGAAGAGGATGATGATGAAGATATGTTCAAAGATGATGCTGGC AACTTGAAAAATCCGTTTTCGAAGCATATTCCTTCAGTCTCAAAGTTATCAGCATCATTT AAGGGGCTCGGTTTCATTGGGAAAGCTAGAGCCTACCACAAAGGTGTTCCCAAGAACAAG GTGACTGCTAAAACTAACTATAGTGGCAAAGGTAGTGAGCATCAGTCTGGTAGCAGGAGT GCCAATGAGCTTCTCCCTCCCAGCGCCAGTTTTGTGAAGCTGTCCGACATGGGCTCTGAT GAGTGGAGCGCATTCCTCGACAAGTTCCAGGAGCTGCTCCCGAGCGCCTTCCGAGCCCGG AAGCACGCCGCTGCTGATGGCCCTCGTCCGTTGCAGAGGCTGGGCACTTCTTGCCAGTTT TGA

Peptide Sequence

PEP ID	Os09t0474800-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:18174589:18177971:-1 gene:Os09g0474800 transcript:Os09t0474800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os09t0474800-01);Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os09t0474800-02)
Sequence	MSRDLDCPVQTQMAVAVLDRSFSSEYPASSRTEGRSCSWKRVFVQTENGYVLGIELERGE NAHTVKKKLQVALKVPTEESSLTFGDLVLNNDLSSIRNDSPLLLRKNQMHRSSSTPCLSP TAHDVQEQDHSEPIEILGCLSPSSRMKQLAKDVVEAIRNGVDPVPVNSGMGGAYYFKNIY GERVAIVKPTDEEPFAPNNPKGFVGKTLGLPGLKRSVPVGETGLREVAAYLLDHDNFANV PPTMLVKITHSVFNVNDTVSCKSKVFHNKLQAVSKLASLQQFIAHDYDASDHGTSSFPVS AVHRIGILDIRIFNTDRHAGNLLVRKLGPGPDNFGVQTELIPIDHGLCLPESLEDPYFEW IHWPQASIPFTEEELEYIANLDPVKDAEMLRLELPFIRGACLRVLVLSTIFLKEAAAFGL CLSEIGEMMSRQFTGKEEEPSELELLCMEARKWVKKRELFLPEAGVEDDNDGITQFSIDS EDGSDASELPSFSKFGLMNASHRNPLSKLDECDEEDGEEEEDDDGDEEDDDEDMFKDDAG NLKNPFSKHIPSVSKLSASFKGLGFIGKARAYHKGVPKNKVTAKTNYSGKGSEHQSGSRS ANELLPPSASFVKLSDMGSDEWSAFLDKFQELLPSAFRARKHAAADGPRPLQRLGTSCQF

Transcript Sequence

Transcript ID	Os09t0474800-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:18174589:18177971:-1 gene:Os09g0474800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os09t0474800-01);Phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein. (Os09t0474800-02)
Sequence	TTTCCTTTAATCTATATTCTGGTTCACTCATGGTTGTATTGTATGGGATTTAAATCTATC TGCTGCACTTGTAGTGATCGAGATTATTTTAGATGACTACACTATGCTTTATAGACTTAC CATTCGAAAATCACCATGTTTCCACCGTGTGGTTGACTGATTCTTATGACCGGCTTTCAT CAGACCCCCCCCCCCCCCCCCCCCAAAAAAAACTAGTCTCGATCTAACTTACGGAGTAAT TAGAACTGCTAAGAGTTTCGTTTGTTCTATGTTGGCCTTCTGTATGTTATTGGCGGGGTG TTTTCCACATGATTTCTGCCGTATATTTTAAAATTTTACCATCAACTGATGATATTGTCT GTCCGGGGTTCAGACCGGAGCTTGCTGTCATACATGATGGACAAAACTATGGTAGTACAA GCTATTTCTCTTACCGGCTTTGATGACTCCCATAGCTGTCGACAAAAGGCTTGTGTAGTT GTGTACCTCTGACTCTGAGAAGTATGAAAACCAGAAGTAAACCAACTTGGCAAGATGTGC TCGGTGTTACGGAACTATAGTTACAAAATTTCGGAAACTAGATTGACGCTTGCAGCGGTA CAGATGATCTAAAGACATTTGTTTGTTGAAACAAGTTGAGGCTCGATTAAGGCAGCACTG TAGACAATTTATTGTGTCAAATATCCATATATTTTCCCTTGAATTGCTTTTGTACCATGG ATGGTTGTCTTAGATACTTCCTAGCTTTGCCCTAAACTTACTTAAACCTGTGAATGTTGA AAAGCTACCCTTTTTTTTATAAATATTTTAGGTTTCATGGTTCAATTCTTCGTTCTCAGG ATATTTGCTGCTCAATTATGCGATAAAGTGCTTCCAGTTGACGCGGAGTTGGTGGAGACG CCTTGCTCTATAATCTATTCTCCATTGCTCAGCAGTGATCAGTTGGAAGATTCTGCCTTT CTTCCTCTTGCTGCCTGTTTGTTTGCTTCCTTGGTGGAGTAGACGAGAGGAGGAGGGCAA GAAGATAAAGGTAGCTTCTTTCAGCCACTCTATGTCCAGGGACTTGGATTGTCCTGTTCA GACACAGATGGCCGTTGCAGTACTGGATCGGAGCTTCAGCAGTGAATATCCTGCAAGCAG CAGAACTGAGGGGAGATCATGTAGTTGGAAAAGAGTCTTTGTCCAAACTGAAAATGGTTA TGTCCTGGGCATTGAACTGGAGAGGGGAGAAAATGCACACACTGTGAAAAAGAAGCTCCA GGTAGCCCTCAAGGTACCCACAGAGGAGAGCTCACTGACCTTTGGTGATCTGGTTCTGAA TAATGATCTCAGCAGTATTCGCAATGACTCACCACTGCTCCTCAGAAAGAATCAAATGCA CCGGAGCAGCTCAACTCCTTGCCTCTCTCCTACTGCTCATGATGTGCAGGAGCAAGATCA CAGCGAACCCATTGAAATCCTTGGATGTTTGAGCCCCTCTTCTCGGATGAAGCAGCTTGC TAAGGATGTTGTGGAAGCCATAAGGAATGGTGTTGACCCGGTACCTGTTAATAGTGGCAT GGGTGGCGCATACTACTTCAAGAACATTTACGGGGAACGTGTTGCAATTGTCAAGCCAAC AGATGAAGAACCATTTGCTCCAAATAATCCTAAAGGTTTTGTGGGGAAGACCCTTGGACT GCCAGGCCTCAAAAGATCAGTACCGGTCGGTGAGACTGGGCTCCGAGAGGTTGCTGCTTA CCTTCTTGACCATGATAACTTTGCAAATGTCCCACCCACAATGCTGGTCAAGATCACGCA CTCTGTGTTCAATGTGAATGATACTGTCAGCTGCAAAAGTAAAGTCTTCCACAACAAATT GCAGGCTGTGAGCAAGCTTGCATCATTGCAGCAATTTATTGCTCATGATTATGATGCTAG TGACCATGGGACATCAAGCTTCCCTGTATCTGCAGTGCACAGGATTGGCATACTTGACAT CAGAATATTCAACACGGACAGGCACGCAGGAAATCTTCTGGTTAGGAAGCTTGGACCTGG GCCTGACAATTTTGGAGTGCAGACTGAACTCATTCCTATTGACCATGGTCTCTGTCTTCC AGAAAGTCTAGAAGACCCTTACTTTGAATGGATTCACTGGCCACAGGCATCCATTCCTTT CACTGAGGAGGAACTCGAATACATTGCAAATCTGGATCCTGTAAAAGATGCTGAAATGCT TCGCTTGGAGCTGCCCTTTATCCGTGGAGCATGTCTGAGGGTGCTGGTGCTATCAACAAT ATTTCTCAAAGAAGCTGCAGCATTTGGCCTCTGCTTATCAGAGATAGGAGAGATGATGAG TAGGCAATTCACTGGGAAAGAAGAGGAGCCAAGTGAGCTTGAGCTTCTTTGCATGGAGGC AAGGAAGTGGGTCAAGAAAAGAGAGCTATTTCTTCCAGAAGCCGGAGTTGAAGATGACAA TGATGGCATCACCCAGTTCTCTATCGACAGCGAAGATGGTTCAGATGCATCTGAATTACC ATCTTTCAGCAAGTTCGGGCTCATGAATGCTAGTCACAGAAATCCACTGTCAAAGTTAGA TGAGTGTGATGAGGAAGATGGTGAAGAGGAAGAGGATGATGATGGTGATGAAGAGGATGA TGATGAAGATATGTTCAAAGATGATGCTGGCAACTTGAAAAATCCGTTTTCGAAGCATAT TCCTTCAGTCTCAAAGTTATCAGCATCATTTAAGGGGCTCGGTTTCATTGGGAAAGCTAG AGCCTACCACAAAGGTGTTCCCAAGAACAAGGTGACTGCTAAAACTAACTATAGTGGCAA AGGTAGTGAGCATCAGTCTGGTAGCAGGAGTGCCAATGAGCTTCTCCCTCCCAGCGCCAG TTTTGTGAAGCTGTCCGACATGGGCTCTGATGAGTGGAGCGCATTCCTCGACAAGTTCCA GGAGCTGCTCCCGAGCGCCTTCCGAGCCCGGAAGCACGCCGCTGCTGATGGCCCTCGTCC GTTGCAGAGGCTGGGCACTTCTTGCCAGTTTTGAAACTAGAAGAAGAAGAAGCAGCAGCT TTATACCAAGGTAATGTAGATGGAACCCATCAGGTGTTCAGCAGCAGCAGCTTTGTCCGT CGAAGGCAGCTAGCAGAAGCTCTGTACGCTTGTAGGTGTCTGTTCTCGGAGAAGATATAG AGGTGGTTCGGGAATAAGACCGTCCGTCCTTGACAAATATGAGCTTGCAGGAGGGTTTGT GTCGTGTTTGTGAATAGCTTTGACATATGTGTTGGGTTGTTCTTTCATCTGTACATATAT GAAATGAATGAGTACCTCTCGATACCGGGCTTGACCTGGTAGTGGTGAGTGTGCTGGCCT TGCCGGTGTACCGGCGCTGTACC