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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0474000-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:18122627:18123463:-1 gene:Os09g0474000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BZIP TRANSCRIPTION FACTOR TFX1 description:bZIP transcription factor, bZIP-1 domain containing protein. (Os09t0474000-01)
Sequence

ATGCTGCACCACCATTACCATGGCGAGGTGGCCAGCCTGCACTGCCTCTCACCTCCAAGC
CTACCATTCAGTTCCCACTACCACAGCAACATGATCACCATGGCACCCTCGCCCTTCCAC
TTCCCAGCAGCTACCTGTGAACCTATCCAGGAATTGCTCCCTGTGGTAGCGGGCAATCGC
CCAGCCGGCTCTGGCAGCACAGATGACGCCTACCAGATGGCAGCGGAGGAGGAGCGGAGG
CGGCGGAGGATGATCTCCAACCGGGAGTCGGCACGGCGGTCGCGCATGCGCAAGCAGCGG
CAGCTCAGCGAGCTGAGGGGGCAGGTTGTCCACCTCCGTGACGCCAACCGCCGCCTCCTT
GATGAGCTCAACCAAGCAATGAGGGGCTGCAGTGATGTCCACTGCGAGAACGCCCGGCTC
AGGAAGGAGAGGGCCGAGCTCCAGACCAAGCTCGAGCACCTCATGCAAGCACAGAAGAAT
AACACCTCGCCGAGCTCCTCACAGCCATGCGAGAATATTTGA

Peptide Sequence

PEP ID

Os09t0474000-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:18122627:18123463:-1 gene:Os09g0474000 transcript:Os09t0474000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BZIP TRANSCRIPTION FACTOR TFX1 description:bZIP transcription factor, bZIP-1 domain containing protein. (Os09t0474000-01)
Sequence

MLHHHYHGEVASLHCLSPPSLPFSSHYHSNMITMAPSPFHFPAATCEPIQELLPVVAGNR
PAGSGSTDDAYQMAAEEERRRRRMISNRESARRSRMRKQRQLSELRGQVVHLRDANRRLL
DELNQAMRGCSDVHCENARLRKERAELQTKLEHLMQAQKNNTSPSSSQPCENI

Transcript Sequence

Transcript ID

Os09t0474000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:18122627:18123463:-1 gene:Os09g0474000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BZIP TRANSCRIPTION FACTOR TFX1 description:bZIP transcription factor, bZIP-1 domain containing protein. (Os09t0474000-01)
Sequence

CGCTCAGAGAGAGCAAATTCTTCAGTAAGCAGAATCAAAGCAGATTAACCCTCATCTACT
TCTGGCCCTCTAAGAGTTCTCCACTAAGCAAGCGAAAACAGCCATGCTGCACCACCATTA
CCATGGCGAGGTGGCCAGCCTGCACTGCCTCTCACCTCCAAGCCTACCATTCAGTTCCCA
CTACCACAGCAACATGATCACCATGGCACCCTCGCCCTTCCACTTCCCAGCAGCTACCTG
TGAACCTATCCAGGAATTGCTCCCTGTGGTAGCGGGCAATCGCCCAGCCGGCTCTGGCAG
CACAGATGACGCCTACCAGATGGCAGCGGAGGAGGAGCGGAGGCGGCGGAGGATGATCTC
CAACCGGGAGTCGGCACGGCGGTCGCGCATGCGCAAGCAGCGGCAGCTCAGCGAGCTGAG
GGGGCAGGTTGTCCACCTCCGTGACGCCAACCGCCGCCTCCTTGATGAGCTCAACCAAGC
AATGAGGGGCTGCAGTGATGTCCACTGCGAGAACGCCCGGCTCAGGAAGGAGAGGGCCGA
GCTCCAGACCAAGCTCGAGCACCTCATGCAAGCACAGAAGAATAACACCTCGCCGAGCTC
CTCACAGCCATGCGAGAATATTTGATTACTGAATAATAAATCATTCTTAATTATCTCCTC
ATTTTAACTACGAGGATTATTATTAGTATATCAAAATAAGACATGTTTTGAGATGCTTCC
TTCGGCTTCTGTTTTTTTGTTTTATCTTTTATGTACGGGAATATTCTAACTGCCCATTAT
TGACATCTTTTTGTCAAGGTGGCTAAGATAAATATGGATTGAGCCTATTGGCGAGTT