Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0466800-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:17731574:17733252:-1 gene:Os09g0466800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0466800-01)
Sequence

ATGAAGAAGAGCAGAGAAGGTAACCTGAAGCATGTCAAGGGTTCGCTCTGCCTCGTCCCG
CCTCTACTTCTCGCGGTGTTCTTCTACCTGCAGTTCCAGACGCTGGGCCTCTTCTCCCCG
ATCTTCCGGTGCGGTGGCCAGTCCGCCGGCGGCGGCGGCGGCGACGACTACGTCGACCGA
CTGCGAGCCTCGGCCACGTTCCTCCCGCTGAAGGACACGCGGGAGTGGGCCGAGACGTGG
TTCATCAGCACGCTCGACGACACGTCGGAGCCGGAGGGCGAGGCCAAGAACATCGTCTTC
CCGTCCGCGGCCTCCGCCGGCCGCCTCCTCTGCATGTCGGCGCCGTCACGCCGTGACGGC
ACCAGGAACGCCTACGCGCTCGCGTGGCGCGACGCGCTCCCGGGCGGCGCGGAGCTCAGG
CCGGGCCTCGCGTACGTGTCCGAGACGGCGTACGACCACAGCAACCTGTGGCACGGCATC
TCGGCGCTCATCCCGTTCGCGTCGTGGCACGCGAGGAGCGGGTGCAGGGCGAGGCCCGCG
AGGTGGGCGCTGTTCCACCACGGCGAGGTGAGGCTCGGGATGAGCCCGTGGCTGACGTCG
CTGGCCGAGGCGACCACCGGCGTGGGAATGGTTGTCGAGACGTTCAACGCGTCCGACGTC
CCCGTGTGCTTCGAGGAGGCGGTGGTGTTCAGGCGGAACATGGCCGGGATGACCCGGGAG
CGGCTTCTCGCGGCGTTCGACTTCATGCGGTGCAAGGCCAGGGCGCAGTGCGGCGTGGTG
GCGGACGTCTCCGACCCCGACTCCGCCGCCGTGCGCGTCACCATCCTGTTCCGCACGGGC
GCGCGGGCGTTCAAGGACGAGGCCGCAGTCACGCGCGTCTTCAAGAGCGAGTGCGCGCGC
GTCGCCGGCTGCGCGCTCACCACGGCGCGCTCCGACAACCTGACCTTCTGCGACCAGGTG
AAGTTGATGAGCGGGACGGACGTGCTGATCTCGTCGCACGGGGCGCAGATGACGAATCTG
GTGTTCATGGACAGGAACAGCAGCATCATGGAGTTCTACCCCAAGGGGTGGCGAGAGAGG
GCGGGAGGCGGGCAGTTCGTGTACCGGTGGGGCGCGGACAGGTCGGGGATGCGGCACGAG
GGCTCGTGGTGGGATCCCCACGGCGAGCCGTGCCCCGGCTCGCCGGACATCCTCAGCTGC
TACAAGAACCGCCAGATCGGCCACGACGAGGCCTACTTCGCGCAGTGGGCGGCCAGGGTG
TTCGCGGCGGCCAAGGAGCGCAAGGCCGGCGGCTCGCCGGCGTCCACGCGGCGACGAGAA
GCGCCGACGTGCCAGTGCAGCTAA

Peptide Sequence

PEP ID

Os09t0466800-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:17731574:17733252:-1 gene:Os09g0466800 transcript:Os09t0466800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0466800-01)
Sequence

MKKSREGNLKHVKGSLCLVPPLLLAVFFYLQFQTLGLFSPIFRCGGQSAGGGGGDDYVDR
LRASATFLPLKDTREWAETWFISTLDDTSEPEGEAKNIVFPSAASAGRLLCMSAPSRRDG
TRNAYALAWRDALPGGAELRPGLAYVSETAYDHSNLWHGISALIPFASWHARSGCRARPA
RWALFHHGEVRLGMSPWLTSLAEATTGVGMVVETFNASDVPVCFEEAVVFRRNMAGMTRE
RLLAAFDFMRCKARAQCGVVADVSDPDSAAVRVTILFRTGARAFKDEAAVTRVFKSECAR
VAGCALTTARSDNLTFCDQVKLMSGTDVLISSHGAQMTNLVFMDRNSSIMEFYPKGWRER
AGGGQFVYRWGADRSGMRHEGSWWDPHGEPCPGSPDILSCYKNRQIGHDEAYFAQWAARV
FAAAKERKAGGSPASTRRREAPTCQCS

Transcript Sequence

Transcript ID

Os09t0466800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:17731574:17733252:-1 gene:Os09g0466800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0466800-01)
Sequence

AATGAGCGTCGTCGTGTGAAATTATAGCTCGACAGCCATGAAGAAGAGCAGAGAAGGTAA
CCTGAAGCATGTCAAGGGTTCGCTCTGCCTCGTCCCGCCTCTACTTCTCGCGGTGTTCTT
CTACCTGCAGTTCCAGACGCTGGGCCTCTTCTCCCCGATCTTCCGGTGCGGTGGCCAGTC
CGCCGGCGGCGGCGGCGGCGACGACTACGTCGACCGACTGCGAGCCTCGGCCACGTTCCT
CCCGCTGAAGGACACGCGGGAGTGGGCCGAGACGTGGTTCATCAGCACGCTCGACGACAC
GTCGGAGCCGGAGGGCGAGGCCAAGAACATCGTCTTCCCGTCCGCGGCCTCCGCCGGCCG
CCTCCTCTGCATGTCGGCGCCGTCACGCCGTGACGGCACCAGGAACGCCTACGCGCTCGC
GTGGCGCGACGCGCTCCCGGGCGGCGCGGAGCTCAGGCCGGGCCTCGCGTACGTGTCCGA
GACGGCGTACGACCACAGCAACCTGTGGCACGGCATCTCGGCGCTCATCCCGTTCGCGTC
GTGGCACGCGAGGAGCGGGTGCAGGGCGAGGCCCGCGAGGTGGGCGCTGTTCCACCACGG
CGAGGTGAGGCTCGGGATGAGCCCGTGGCTGACGTCGCTGGCCGAGGCGACCACCGGCGT
GGGAATGGTTGTCGAGACGTTCAACGCGTCCGACGTCCCCGTGTGCTTCGAGGAGGCGGT
GGTGTTCAGGCGGAACATGGCCGGGATGACCCGGGAGCGGCTTCTCGCGGCGTTCGACTT
CATGCGGTGCAAGGCCAGGGCGCAGTGCGGCGTGGTGGCGGACGTCTCCGACCCCGACTC
CGCCGCCGTGCGCGTCACCATCCTGTTCCGCACGGGCGCGCGGGCGTTCAAGGACGAGGC
CGCAGTCACGCGCGTCTTCAAGAGCGAGTGCGCGCGCGTCGCCGGCTGCGCGCTCACCAC
GGCGCGCTCCGACAACCTGACCTTCTGCGACCAGGTGAAGTTGATGAGCGGGACGGACGT
GCTGATCTCGTCGCACGGGGCGCAGATGACGAATCTGGTGTTCATGGACAGGAACAGCAG
CATCATGGAGTTCTACCCCAAGGGGTGGCGAGAGAGGGCGGGAGGCGGGCAGTTCGTGTA
CCGGTGGGGCGCGGACAGGTCGGGGATGCGGCACGAGGGCTCGTGGTGGGATCCCCACGG
CGAGCCGTGCCCCGGCTCGCCGGACATCCTCAGCTGCTACAAGAACCGCCAGATCGGCCA
CGACGAGGCCTACTTCGCGCAGTGGGCGGCCAGGGTGTTCGCGGCGGCCAAGGAGCGCAA
GGCCGGCGGCTCGCCGGCGTCCACGCGGCGACGAGAAGCGCCGACGTGCCAGTGCAGCTA
ACTGAAGTATGATCAGTTAATGATCAAGTTGCATTGGGTCGTGATTCGTGAAGCTTTACG
TGCACGCTGGTGGCATGCAGGGAGCCAGGGATGATAATTCAATGGTCTGATTAATATTGT
GTTATACCTTATATATACTTGTATCTGAATAAGCAACCTGAAAAATGCAACTGTAACTCT
TGATCCGAGCATTTTTTTAGGTGG