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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0465800-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:17659921:17662227:-1 gene:Os09g0465800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Legume lectin, beta domain domain containing protein. (Os09t0465800-01)
Sequence

ATGGCCCCCGCCGCCGCCGCCGCCGCCGCGCTCGTGCGCCTCCCTCTCCGCCCGGCGCGG
GCCACCCTGCCGAACCAAGGTTTTGGCCGCCGCCGCGCCGGGGCGTCTTCGCTGGCCGTG
CGGGCGAAGGACTCCGACGATCTGAGAGTGCTGATCTCGGAGAAGCCCGCGGAGCCGGCG
CCTGCGAAGCGGGAGGGGTGGGAGGGGTTTGGCCGGGAGGTGGGTGATGGGGATGGAGAG
GTCCAGGTGCAGGGGGAATCGACTTCCTGGAATGTTCTCAACCAGATTGGCGTCGAGTTG
GACTCTGAAAATTCATATACTGCTCTTGTTTATGGGACATCTGCGCTTGTTACGATCTGG
ATTTCATCAATTGTTGTTTCTGCACTTGATTCAGTCCCTTTGGTTCCCCAGGTGATGGAA
GTTGTCGGCCTTGGATTCACAGTTTGGTTCACCTCGCGATATTTGATTTTTAAGGAAAAT
CGGGATGAATTGATCACCAGAATTGGCTCCATCAAGAAGCAGATACTTGGATCTCGTGGT
GACTGA

Peptide Sequence

PEP ID

Os09t0465800-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:17659921:17662227:-1 gene:Os09g0465800 transcript:Os09t0465800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Legume lectin, beta domain domain containing protein. (Os09t0465800-01)
Sequence

MAPAAAAAAALVRLPLRPARATLPNQGFGRRRAGASSLAVRAKDSDDLRVLISEKPAEPA
PAKREGWEGFGREVGDGDGEVQVQGESTSWNVLNQIGVELDSENSYTALVYGTSALVTIW
ISSIVVSALDSVPLVPQVMEVVGLGFTVWFTSRYLIFKENRDELITRIGSIKKQILGSRG
D

Transcript Sequence

Transcript ID

Os09t0465800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:17659921:17662227:-1 gene:Os09g0465800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Legume lectin, beta domain domain containing protein. (Os09t0465800-01)
Sequence

GTGCGAGTCAGCTGCTCCTCCCAGAAACCTCGCCACCCTCTCTCTCCGCCGCGAATCGAG
ACTCCGATGGCCCCCGCCGCCGCCGCCGCCGCCGCGCTCGTGCGCCTCCCTCTCCGCCCG
GCGCGGGCCACCCTGCCGAACCAAGGTTTTGGCCGCCGCCGCGCCGGGGCGTCTTCGCTG
GCCGTGCGGGCGAAGGACTCCGACGATCTGAGAGTGCTGATCTCGGAGAAGCCCGCGGAG
CCGGCGCCTGCGAAGCGGGAGGGGTGGGAGGGGTTTGGCCGGGAGGTGGGTGATGGGGAT
GGAGAGGTCCAGGTGCAGGGGGAATCGACTTCCTGGAATGTTCTCAACCAGATTGGCGTC
GAGTTGGACTCTGAAAATTCATATACTGCTCTTGTTTATGGGACATCTGCGCTTGTTACG
ATCTGGATTTCATCAATTGTTGTTTCTGCACTTGATTCAGTCCCTTTGGTTCCCCAGGTG
ATGGAAGTTGTCGGCCTTGGATTCACAGTTTGGTTCACCTCGCGATATTTGATTTTTAAG
GAAAATCGGGATGAATTGATCACCAGAATTGGCTCCATCAAGAAGCAGATACTTGGATCT
CGTGGTGACTGAGTAGTTCTCCTACACGGTTAGTGATGAATCTCGAAAGGTGCTTCGAAT
GTTTAATGGGTACCCATGTTGTGTTCTTGAAAAAGTTGTTATGAACATTTAATATGTTAT
CTTAGTGCTTTAGTGCTGGTTCTGAAT