Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0465500-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:17645487:17648515:1 gene:Os09g0465500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0465500-01)
Sequence

ATGGGGCCCCCCTCCGCCTCCTCCTCGCCGGCGGCGGCGCCGCGGCGGTCGGCGCCGACG
ATGAGGCTGCGGAGGGAGGCGCTGGAGTCGGTGCTGGAGGAACTCCGGCGGGCGCTGGAC
GAGCTTCGCGAGTGCGGGGAGCTCGGCGTGCCTCTCCCTGACCCCGAGGGAGCCGTTAAC
GACGGCGGCGGCGGCGAGGAGCAGCCGGATAACGAGGAAGAAGGCGGCGGCGGCGGCGGC
AGCGGCGGTGGTAACGATGATGATTCGGCGGCGTCGCTGGCGGGTGGCTCCGACGGTGAG
ACGGACAAGCTATGTGATCTTCTTAAATCTACATTCGAATCACCCAATTTTTTTCAAAAG
GTTGATGAAATTCAGAAGTCACTGTATCAAAATGATGCAGTTGAACAAGATCCATCATGG
GATATAGTAAAGGCAGTAGATTTGTGGGAAGACGATGACTTAGGTGATGGATATGTTCTT
GTTAAGAACGATGATGCAACTGAGGGGATGGCTTTCTTTATTGCCACATACATATCGTCG
CTTAAAACAGCCAATGAATGTTCTCCTGATCAAATTAGAAAAGCCCTCAAGAAGACATTT
TCATCTCGAAAGAGAAAAGGTAAACTTCGGAAGGCATGGAATGGGACAAAAGTTATTTAT
AATGTAGATTCATGGAGTGCCACAGCTATTGGAATCTACCATAATCAAGCAATTCTTAAG
GTAGCAACTACAGCCTTCCGGACGTCCTGCAGTGTGATATCCAAATTTCTGTGA

Peptide Sequence

PEP ID

Os09t0465500-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:17645487:17648515:1 gene:Os09g0465500 transcript:Os09t0465500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0465500-01)
Sequence

MGPPSASSSPAAAPRRSAPTMRLRREALESVLEELRRALDELRECGELGVPLPDPEGAVN
DGGGGEEQPDNEEEGGGGGGSGGGNDDDSAASLAGGSDGETDKLCDLLKSTFESPNFFQK
VDEIQKSLYQNDAVEQDPSWDIVKAVDLWEDDDLGDGYVLVKNDDATEGMAFFIATYISS
LKTANECSPDQIRKALKKTFSSRKRKGKLRKAWNGTKVIYNVDSWSATAIGIYHNQAILK
VATTAFRTSCSVISKFL

Transcript Sequence

Transcript ID

Os09t0465500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:17645487:17648515:1 gene:Os09g0465500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0465500-01)
Sequence

CTCTTTTTTCTCCCCCCACAAAACCCGGAGAAGCGAAATCAACCACCAGATACGACGAGC
GCCTCGACAGCGATCCGCCGCCGCCGCCGCCGCCGCGTCGGGTGTGTGGTAGGGTTTGGG
GCGATGGGGCCCCCCTCCGCCTCCTCCTCGCCGGCGGCGGCGCCGCGGCGGTCGGCGCCG
ACGATGAGGCTGCGGAGGGAGGCGCTGGAGTCGGTGCTGGAGGAACTCCGGCGGGCGCTG
GACGAGCTTCGCGAGTGCGGGGAGCTCGGCGTGCCTCTCCCTGACCCCGAGGGAGCCGTT
AACGACGGCGGCGGCGGCGAGGAGCAGCCGGATAACGAGGAAGAAGGCGGCGGCGGCGGC
GGCAGCGGCGGTGGTAACGATGATGATTCGGCGGCGTCGCTGGCGGGTGGCTCCGACGGT
GAGACGGACAAGCTATGTGATCTTCTTAAATCTACATTCGAATCACCCAATTTTTTTCAA
AAGGTTGATGAAATTCAGAAGTCACTGTATCAAAATGATGCAGTTGAACAAGATCCATCA
TGGGATATAGTAAAGGCAGTAGATTTGTGGGAAGACGATGACTTAGGTGATGGATATGTT
CTTGTTAAGAACGATGATGCAACTGAGGGGATGGCTTTCTTTATTGCCACATACATATCG
TCGCTTAAAACAGCCAATGAATGTTCTCCTGATCAAATTAGAAAAGCCCTCAAGAAGACA
TTTTCATCTCGAAAGAGAAAAGGTAAACTTCGGAAGGCATGGAATGGGACAAAAGTTATT
TATAATGTAGATTCATGGAGTGCCACAGCTATTGGAATCTACCATAATCAAGCAATTCTT
AAGGTAGCAACTACAGCCTTCCGGACGTCCTGCAGTGTGATATCCAAATTTCTGTGAGCT
GCTGCTGTTACTGGCATGCTTCCCATCATCATTAGGTAAATTGGCTAACACGGCCAGAAA
GACCTGCAATACTCATGTAAAATAGTGTCTATTCGTTGGTTTGCCATTGTAAGCTTTGAC
TTTCTACAACCTAACTGTAAATATGACATTCGTTTGAAACTTTGAATAAACATTTCAATA
AATTTAGTGCTGG