Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0463300-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:17535030:17537818:1 gene:Os09g0463300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF547 domain containing protein. (Os09t0463300-01);Hypothetical conserved gene. (Os09t0463300-02)
Sequence

GTCGTCAGGCTCGAGGAGCAGGTGGTCAATTTCCGGCAAGGACTCTACCAGGAGGCCATA
ATCTTCTCCTCGGCCAAGAACACGAGCCTCCCCGGCGGCGAGGGATGCGTGCCGGCGCAG
CTCATGCCGTCGAGCCCGGTGCCGAACTCAGAGGTCTCTCCGGCAAATTGTCATTCTCCT
CCTACTCGACCTTCAATGAACGGGGTCGCCGGTGCAAAGCAAACGCCGAGAAAGCCTTCT
CCTTCGGCGGCGGTGGCGCAAGACGACCGCTCCGGCGCCGGGAAAGAGAACCAGTCGTGC
AGTAACACACCGGCTAGAAATTGTCGCCATTCGCCGCTGCTGCAGAAGGCATCAAAATCC
AGACTGCCGACAGCAGCAGCGCCTGAGAAACGCAGGGCTACTGCTCAGACGATTAGCACA
GTGCCGGACCGTAAAAGGCTCGCAGACACTGTCAGCAATAATTCAGAAAAAGCTTCCCAA
GATGACTCGAGCGTGCCGAACAGATTGTCGGAGGAACTGTTGAGATGCCTGCTCGCCATC
TTCTCGCAGATGGGCGGTTCATCAGCAAGCGGCCAAGACGAGGAGCAGGCGGCATTGTCT
CCTTCGGTTTCAGGTTCTTGCGAGAGCTCAGAGGACGCATACCCTCAAGATCCTTATGGC
ATACTGGAATTCGGCACAAGAGACGTTGGGTCATACAAGCGATTCCATGTAATCGACGCC
ACCTCGTTCGATCAGACGGCCATGGAGAACGACACCATGCTTACCCGGAAACTCAAGGCT
TTGATCCGGAGGCTTTCATCGGTTGACCTGACGGGGCTCTCCCATCAGCAGAAGCTGGCA
TTCTGGATCAACATCTACAATTCGTGCATGATGAATGCATTTCTCGAGCAAGGGATACCT
ACCACCCCTCATATGCTCGTGGCAATGATGCCGAAGGCGACAATAAATGTGGGTGGGCGC
ACGCACAGCGCCATGTCGATCGAGCATTTCATCCTGCGGCTGCCCTACAGCGTGAAGCAT
GTGAATCCTGGTGGAGTGACCAAGGGCGCCGCCGACGACGTGACGATGCGAGGCGTGTTC
GGGCTGGAGTGGCCTGAGCCCCTGGTCACCTTCGCGCTCTCCTGCGGCAGCTGGTCCTCC
CCTGCTGTGAGGGTGTACACGGCGCGGGGAGTGGAGGAGGAGCTGGAGGCGGCGAAGAGG
GACTACCTGCAGTCGGCGGTGGTGGTGTCGGCGCCGGCGAAGGTGGCGATCCCGAAGCTG
CTGCACTGGTACCTCCTCGACTTCGCCAAGGACGTGGACTCCCTCATGGACTGGGTGTGC
CTCCAGCTGCCGAGCGAGCTGCGGCAGAAGGCGATGAGGATCGTGGAGGACGGCAGAAGG
GGTGTCGCCGCCGAGTCGCGCCGCGTGCAGGTCCTGCCGTACGAATTCAGATTCAGGTAC
CTGCTGGCCTCATGA

Peptide Sequence

PEP ID

Os09t0463300-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:17535030:17537818:1 gene:Os09g0463300 transcript:Os09t0463300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF547 domain containing protein. (Os09t0463300-01);Hypothetical conserved gene. (Os09t0463300-02)
Sequence

VVRLEEQVVNFRQGLYQEAIIFSSAKNTSLPGGEGCVPAQLMPSSPVPNSEVSPANCHSP
PTRPSMNGVAGAKQTPRKPSPSAAVAQDDRSGAGKENQSCSNTPARNCRHSPLLQKASKS
RLPTAAAPEKRRATAQTISTVPDRKRLADTVSNNSEKASQDDSSVPNRLSEELLRCLLAI
FSQMGGSSASGQDEEQAALSPSVSGSCESSEDAYPQDPYGILEFGTRDVGSYKRFHVIDA
TSFDQTAMENDTMLTRKLKALIRRLSSVDLTGLSHQQKLAFWINIYNSCMMNAFLEQGIP
TTPHMLVAMMPKATINVGGRTHSAMSIEHFILRLPYSVKHVNPGGVTKGAADDVTMRGVF
GLEWPEPLVTFALSCGSWSSPAVRVYTARGVEEELEAAKRDYLQSAVVVSAPAKVAIPKL
LHWYLLDFAKDVDSLMDWVCLQLPSELRQKAMRIVEDGRRGVAAESRRVQVLPYEFRFRY
LLAS

Transcript Sequence

Transcript ID

Os09t0463300-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:17535030:17537818:1 gene:Os09g0463300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF547 domain containing protein. (Os09t0463300-01);Hypothetical conserved gene. (Os09t0463300-02)
Sequence

GGTCGTCAGGCTCGAGGAGCAGGTGGTCAATTTCCGGCAAGGACTCTACCAGGAGGCCAT
AATCTTCTCCTCGGCCAAGAACACGAGCCTCCCCGGCGGCGAGGGATGCGTGCCGGCGCA
GCTCATGCCGTCGAGCCCGGTGCCGAACTCAGAGGTCTCTCCGGCAAATTGTCATTCTCC
TCCTACTCGACCTTCAATGAACGGGGTCGCCGGTGCAAAGCAAACGCCGAGAAAGCCTTC
TCCTTCGGCGGCGGTGGCGCAAGACGACCGCTCCGGCGCCGGGAAAGAGAACCAGTCGTG
CAGTAACACACCGGCTAGAAATTGTCGCCATTCGCCGCTGCTGCAGAAGGCATCAAAATC
CAGACTGCCGACAGCAGCAGCGCCTGAGAAACGCAGGGCTACTGCTCAGACGATTAGCAC
AGTGCCGGACCGTAAAAGGCTCGCAGACACTGTCAGCAATAATTCAGAAAAAGCTTCCCA
AGATGACTCGAGCGTGCCGAACAGATTGTCGGAGGAACTGTTGAGATGCCTGCTCGCCAT
CTTCTCGCAGATGGGCGGTTCATCAGCAAGCGGCCAAGACGAGGAGCAGGCGGCATTGTC
TCCTTCGGTTTCAGGTTCTTGCGAGAGCTCAGAGGACGCATACCCTCAAGATCCTTATGG
CATACTGGAATTCGGCACAAGAGACGTTGGGTCATACAAGCGATTCCATGTAATCGACGC
CACCTCGTTCGATCAGACGGCCATGGAGAACGACACCATGCTTACCCGGAAACTCAAGGC
TTTGATCCGGAGGCTTTCATCGGTTGACCTGACGGGGCTCTCCCATCAGCAGAAGCTGGC
ATTCTGGATCAACATCTACAATTCGTGCATGATGAATGCATTTCTCGAGCAAGGGATACC
TACCACCCCTCATATGCTCGTGGCAATGATGCCGAAGGCGACAATAAATGTGGGTGGGCG
CACGCACAGCGCCATGTCGATCGAGCATTTCATCCTGCGGCTGCCCTACAGCGTGAAGCA
TGTGAATCCTGGTGGAGTGACCAAGGGCGCCGCCGACGACGTGACGATGCGAGGCGTGTT
CGGGCTGGAGTGGCCTGAGCCCCTGGTCACCTTCGCGCTCTCCTGCGGCAGCTGGTCCTC
CCCTGCTGTGAGGGTGTACACGGCGCGGGGAGTGGAGGAGGAGCTGGAGGCGGCGAAGAG
GGACTACCTGCAGTCGGCGGTGGTGGTGTCGGCGCCGGCGAAGGTGGCGATCCCGAAGCT
GCTGCACTGGTACCTCCTCGACTTCGCCAAGGACGTGGACTCCCTCATGGACTGGGTGTG
CCTCCAGCTGCCGAGCGAGCTGCGGCAGAAGGCGATGAGGATCGTGGAGGACGGCAGAAG
GGGTGTCGCCGCCGAGTCGCGCCGCGTGCAGGTCCTGCCGTACGAATTCAGATTCAGGTA
CCTGCTGGCCTCATGAAGAGAGGCCAGTGAGTAGCAGCAATCAGCGAGTGAATTCGAGGG
TGTTTTACTGCACCTTGTACACAGGCTTCCAATAATTGTGAGTTTTGTTCTTCGGTGATG
TGAATGAATGAAAGGAAGTATAAAAGGTGTTTCCACC