Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0460500-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:17421207:17422414:1 gene:Os09g0460500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, GDXG, active site domain containing protein. (Os09t0460500-00)
Sequence

GCCATGGAACCGCACGCCGATGAGGTAGTGTTCGACGGCCCGTACTTCCGCATCTACAAG
AACGGGAAGGTAGACCGCCTCCACCGGCCACTTCTCGTTGCCGCGGGCGTCGACGATGCC
ACCGGCGTCGTCTCCAAGGACGTCGTCCTCGACGCCGGGACAGGACTGTTCGTTCGCGTC
TTCCTGCCCAAGGTGCAAGACCAAGAAACCGGCAAAAAGCTTCCTGTCCTCGTGTACTTC
CACGGCGGCGGATTCATCATCGAGTCCGCTGACTCCGCCACGTACCACAACTACCTCAAC
TCCGTCGCCGCCGCGGCCGGCGTGCTTGTGGTGTCCGTCAACTACCGGTTAGCCCCTGAA
AACCCGCTGCCTGCAGGATACGACGATTCTTGGGCGGCGCTCCAGTGGGCGGTGTCCGCG
CAGGACGACTGGATCGCCGAGCACGGCGACACGGAGCGCGTCTTCGTCGCCGGCGACAGC
GCCGGAGGCAACATCGTGCACGAGATGCTCCTGAGGGCCTCCTCGAACAAAGGGCCGAGG
ATAGAGGGCGCGATCGTGCTCCACCCGTTCTTCGGCGGGAGCACGGCCATCGACGGCGAG
TCCGACGACGCGGTCCCCAAGGGCTCCAAGCTGTGGGCGGTCGCGTGCCCGGGCGCAGCG
AACGGCGTGGACGACCCGAGGATGAACCCGACGGCGCCTGCAGGCGCGCCGGCACTGGAG
AAGCTCGGGTGCGAGCGGCTGCTCGTGTGCACGGCGCAGGAGGACTGGCTGGTGGCGAGG
GGCCGCGCGTACTACGGCGCCGTGGCCGCGAGCGCGTGGCGCGGGAGCGCGGCGTGGCAC
GAGACAGAGGGAGAGGGGCACGTCTTCTTCCTTCGCGATCCGGGGTGCGACAAGGCCAAG
CAGCTCTTGGACCGCGTCGTGGCGTTCATATCCGGCGCATGA

Peptide Sequence

PEP ID

Os09t0460500-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:17421207:17422414:1 gene:Os09g0460500 transcript:Os09t0460500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, GDXG, active site domain containing protein. (Os09t0460500-00)
Sequence

AMEPHADEVVFDGPYFRIYKNGKVDRLHRPLLVAAGVDDATGVVSKDVVLDAGTGLFVRV
FLPKVQDQETGKKLPVLVYFHGGGFIIESADSATYHNYLNSVAAAAGVLVVSVNYRLAPE
NPLPAGYDDSWAALQWAVSAQDDWIAEHGDTERVFVAGDSAGGNIVHEMLLRASSNKGPR
IEGAIVLHPFFGGSTAIDGESDDAVPKGSKLWAVACPGAANGVDDPRMNPTAPAGAPALE
KLGCERLLVCTAQEDWLVARGRAYYGAVAASAWRGSAAWHETEGEGHVFFLRDPGCDKAK
QLLDRVVAFISGA

Transcript Sequence

Transcript ID

Os09t0460500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:17421207:17422414:1 gene:Os09g0460500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipase, GDXG, active site domain containing protein. (Os09t0460500-00)
Sequence

GCCATGGAACCGCACGCCGATGAGGTAGTGTTCGACGGCCCGTACTTCCGCATCTACAAG
AACGGGAAGGTAGACCGCCTCCACCGGCCACTTCTCGTTGCCGCGGGCGTCGACGATGCC
ACCGGCGTCGTCTCCAAGGACGTCGTCCTCGACGCCGGGACAGGACTGTTCGTTCGCGTC
TTCCTGCCCAAGGTGCAAGACCAAGAAACCGGCAAAAAGCTTCCTGTCCTCGTGTACTTC
CACGGCGGCGGATTCATCATCGAGTCCGCTGACTCCGCCACGTACCACAACTACCTCAAC
TCCGTCGCCGCCGCGGCCGGCGTGCTTGTGGTGTCCGTCAACTACCGGTTAGCCCCTGAA
AACCCGCTGCCTGCAGGATACGACGATTCTTGGGCGGCGCTCCAGTGGGCGGTGTCCGCG
CAGGACGACTGGATCGCCGAGCACGGCGACACGGAGCGCGTCTTCGTCGCCGGCGACAGC
GCCGGAGGCAACATCGTGCACGAGATGCTCCTGAGGGCCTCCTCGAACAAAGGGCCGAGG
ATAGAGGGCGCGATCGTGCTCCACCCGTTCTTCGGCGGGAGCACGGCCATCGACGGCGAG
TCCGACGACGCGGTCCCCAAGGGCTCCAAGCTGTGGGCGGTCGCGTGCCCGGGCGCAGCG
AACGGCGTGGACGACCCGAGGATGAACCCGACGGCGCCTGCAGGCGCGCCGGCACTGGAG
AAGCTCGGGTGCGAGCGGCTGCTCGTGTGCACGGCGCAGGAGGACTGGCTGGTGGCGAGG
GGCCGCGCGTACTACGGCGCCGTGGCCGCGAGCGCGTGGCGCGGGAGCGCGGCGTGGCAC
GAGACAGAGGGAGAGGGGCACGTCTTCTTCCTTCGCGATCCGGGGTGCGACAAGGCCAAG
CAGCTCTTGGACCGCGTCGTGGCGTTCATATCCGGCGCATGAGCTGCATGCTCTTCATCT
GCATATGCTTTCCGGTTGCAGCTGTGCCTTCATTGAAACAAAATAAATGGTTCTATTATT
TTTTTTTTGGGGGACGGGAATATGAATTTCGCATTTGCATTCGCTGCTACGTTCTTGGAA
GAAATATTTTATCGCGTGTATGTTCTTCCATTGGACTGGTGGTTTCCGTTGCTCTGAGCC
TCGGTCCAAGCCGACCGCGATGTAATGTTGTCATGTTGCATTCGGTGGTAGCAACGTTCC
GTTTGGTT