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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0458900-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:17338533:17339171:1 gene:Os09g0458900 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0458900-01)
Sequence

ATGGCGATCAGGAGCATGACGGTGGCGACGACGACGCGGTCTCTGGACGGCGACATGACG
GTGGACGAGTTCAAGGAGTGGCTGAGGCGGTTCGATGTCGACCGCGACGGGCGCATCAGC
CGCGACGAGCTGCGGCGCGCGATGCGCGCCATCCGGGCGCGGTTCACGGGGTGGAGGAGC
AGGCAGGGCATCAGCTACGCCGACGCGGACGGCGACGGCTACATCGACGACGGCGAGGTG
GACGGCCTCATCGAGTACGCGCAGAAGAGCCTCGGCCTCAGGATCGTCGCCTACTAG

Peptide Sequence

PEP ID

Os09t0458900-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:17338533:17339171:1 gene:Os09g0458900 transcript:Os09t0458900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0458900-01)
Sequence

MAIRSMTVATTTRSLDGDMTVDEFKEWLRRFDVDRDGRISRDELRRAMRAIRARFTGWRS
RQGISYADADGDGYIDDGEVDGLIEYAQKSLGLRIVAY

Transcript Sequence

Transcript ID

Os09t0458900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:17338533:17339171:1 gene:Os09g0458900 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0458900-01)
Sequence

ACCTGCACATTCAGATCTCAGGTGAGAATATCTCCAGAGTTGGTTGATCGGAGCAAGAGC
GAGCTAACCGGCGACCGGAGGTAGGGATGGCGATCAGGAGCATGACGGTGGCGACGACGA
CGCGGTCTCTGGACGGCGACATGACGGTGGACGAGTTCAAGGAGTGGCTGAGGCGGTTCG
ATGTCGACCGCGACGGGCGCATCAGCCGCGACGAGCTGCGGCGCGCGATGCGCGCCATCC
GGGCGCGGTTCACGGGGTGGAGGAGCAGGCAGGGCATCAGCTACGCCGACGCGGACGGCG
ACGGCTACATCGACGACGGCGAGGTGGACGGCCTCATCGAGTACGCGCAGAAGAGCCTCG
GCCTCAGGATCGTCGCCTACTAGCTAGCTAATCCAAGCCATGGCTGCTAGCTCCTTTGCA
GCTCGATCGGCTGGCCGTTTGCGACCTAAATAATCTCCATCTTGATCGCTTGTCACTTCG
TCTTGCTTTCTTGTACTTAAATTAATCAACTCATGTACTGTGTGTGCTTGTGATCTGCGC
TGTATTATTAATTGATGTATCACTGATTGCTCTTTGAGAAATCAATTGACCCATGTATGT
TCTTGATCGACGGAATATAACTGGCGTTTATGAACTTAC