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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0458800-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:17332814:17333131:1 gene:Os09g0458800 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0458800-00)
Sequence

ATGGCCTGCTTTGGGTTCGACTTATCCGCGAGGGCGCGCGGCATCGGCGACGTGTACCAT
CCGTTCAACGAGACGGCGGTGCGCGAGAAGTTCAAGGAGTGGATCCGGCAGTTCGACACC
GACGGCGACGGCCGCATCAGCCGCGACGAGCTGCGCCGCGCCATGCGCGCCGTGGGCGTG
CGGTTCACGGGGATCAAGTGCAGGCGCGGCATGAGCCACGCCGACGCGGACGGCGACGGC
TACATCGACGACAGCGAGATCGACGGCCTCATCGAGTACTGGGGGAGGCGCCTCGGCCTC
GGCGTCGCCGCCTACTAG

Peptide Sequence

PEP ID

Os09t0458800-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:17332814:17333131:1 gene:Os09g0458800 transcript:Os09t0458800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0458800-00)
Sequence

MACFGFDLSARARGIGDVYHPFNETAVREKFKEWIRQFDTDGDGRISRDELRRAMRAVGV
RFTGIKCRRGMSHADADGDGYIDDSEIDGLIEYWGRRLGLGVAAY

Transcript Sequence

Transcript ID

Os09t0458800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:17332814:17333131:1 gene:Os09g0458800 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF hand domain containing protein. (Os09t0458800-00)
Sequence

ATGGCCTGCTTTGGGTTCGACTTATCCGCGAGGGCGCGCGGCATCGGCGACGTGTACCAT
CCGTTCAACGAGACGGCGGTGCGCGAGAAGTTCAAGGAGTGGATCCGGCAGTTCGACACC
GACGGCGACGGCCGCATCAGCCGCGACGAGCTGCGCCGCGCCATGCGCGCCGTGGGCGTG
CGGTTCACGGGGATCAAGTGCAGGCGCGGCATGAGCCACGCCGACGCGGACGGCGACGGC
TACATCGACGACAGCGAGATCGACGGCCTCATCGAGTACTGGGGGAGGCGCCTCGGCCTC
GGCGTCGCCGCCTACTAG