Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0458400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:17324461:17327359:1 gene:Os09g0458400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYO1 description:Ortholog of Arabidopsis thaliana cotyledon chloroplast biogenesis factor AtCYO1, Accumulation and/or assembly of photosystem I (PSI), Regulation and/or maintenance of photosynthetic electron transport (Os09t0458400-01);Hypothetical conserved gene. (Os09t0458400-02)
Sequence	ATGACTCCCGCGAACCCCACCCCGCTCCTCTCCTCCCCACGCCCCAACCCTTCCCTCCCC CTCCCCCGCCGCGCCCGGCGCCCCCACCCGCCGCCGGCGGCCAACACCACCGGCGCGGCC TCCACGCCGGACTGGTTCCGGCCTAGGGCGCCGCCCGACGCGGACCCGTCGACATCCGGC GGCCGCGTCGCCGCCCGGGATCCCGGGGTGCGCGTCAGGGCCAGGGAGGGCGCGGAGGAG GAGAAGAAGGGGAGGGGAAGGGGGAGGAGGAGATGGTGGGACTGGTGGTCCGGGGACAGG GAGAGCTACCTCGTCGACGACGTGGAGCCGCTGCCGCTGCCGTTGACCGTTCCGGACACC GAGCCGATGTCCCGCGAGGAGCTCGACCGCCGCCTCAGCTGCGACGTGGAGATCGAGGAT TGCAAGACTGTCTCCTACGAGTGGACGGGCAAGTGCCGGAGTTGCCAGGGGACAGGGCTG GTGAGCTATTTCAGGAAGAAGGGGAGGGAGACCATCTGCAAATGCGTGCCATGCGCTGGC ATTGGTTATGTTCGGAAAATCACATTTCGCCAGGACATTGAAAACATGGATGAGTTAGAC AATGGGAAACCACCATAG

Peptide Sequence

PEP ID	Os09t0458400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:17324461:17327359:1 gene:Os09g0458400 transcript:Os09t0458400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYO1 description:Ortholog of Arabidopsis thaliana cotyledon chloroplast biogenesis factor AtCYO1, Accumulation and/or assembly of photosystem I (PSI), Regulation and/or maintenance of photosynthetic electron transport (Os09t0458400-01);Hypothetical conserved gene. (Os09t0458400-02)
Sequence	MTPANPTPLLSSPRPNPSLPLPRRARRPHPPPAANTTGAASTPDWFRPRAPPDADPSTSG GRVAARDPGVRVRAREGAEEEKKGRGRGRRRWWDWWSGDRESYLVDDVEPLPLPLTVPDT EPMSREELDRRLSCDVEIEDCKTVSYEWTGKCRSCQGTGLVSYFRKKGRETICKCVPCAG IGYVRKITFRQDIENMDELDNGKPP

Transcript Sequence

Transcript ID	Os09t0458400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:17324461:17327359:1 gene:Os09g0458400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYO1 description:Ortholog of Arabidopsis thaliana cotyledon chloroplast biogenesis factor AtCYO1, Accumulation and/or assembly of photosystem I (PSI), Regulation and/or maintenance of photosynthetic electron transport (Os09t0458400-01);Hypothetical conserved gene. (Os09t0458400-02)
Sequence	GCGCTCGTCGCCACATCGCTTGCTTCCCCGTCACTCCCACTATTTCCCACTCGTCGCCGG CGGCGAGCGAGCGAGCGATGATCTCCGCGTCCCGGACGCAAACCCCGCTCCCATCTCCAT GACTCCCGCGAACCCCACCCCGCTCCTCTCCTCCCCACGCCCCAACCCTTCCCTCCCCCT CCCCCGCCGCGCCCGGCGCCCCCACCCGCCGCCGGCGGCCAACACCACCGGCGCGGCCTC CACGCCGGACTGGTTCCGGCCTAGGGCGCCGCCCGACGCGGACCCGTCGACATCCGGCGG CCGCGTCGCCGCCCGGGATCCCGGGGTGCGCGTCAGGGCCAGGGAGGGCGCGGAGGAGGA GAAGAAGGGGAGGGGAAGGGGGAGGAGGAGATGGTGGGACTGGTGGTCCGGGGACAGGGA GAGCTACCTCGTCGACGACGTGGAGCCGCTGCCGCTGCCGTTGACCGTTCCGGACACCGA GCCGATGTCCCGCGAGGAGCTCGACCGCCGCCTCAGCTGCGACGTGGAGATCGAGGATTG CAAGACTGTCTCCTACGAGTGGACGGGCAAGTGCCGGAGTTGCCAGGGGACAGGGCTGGT GAGCTATTTCAGGAAGAAGGGGAGGGAGACCATCTGCAAATGCGTGCCATGCGCTGGCAT TGGTTATGTTCGGAAAATCACATTTCGCCAGGACATTGAAAACATGGATGAGTTAGACAA TGGGAAACCACCATAGTTTGATGGCCCTGTTCGCTTGGCAGCTGTCATTTATTAACTGCT GCTGGATAGATTGTGTTCACAACTTGGACGATTTAACCAGTGATTCTTTCTGTTACAGTC AGGCACGGTACATGATGAGGTGCCATTTTTAAGTGTTGTAAACCATTATCTGCTAATAAT TGTACTCCTTTGTTCTTATCATTATAGTTGATAAAGAAAAGGAAAGAAATTATTTCAAGT C