Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0457800-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:17303319:17304962:1 gene:Os09g0457800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3C description:Alpha-amylase isozyme 3C precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os09t0457800-01)
Sequence	ATGGCAAAGCATTCCACCACAATGAGCTGCCTCCTATTCTTCGTCTTGCTCTGTTTGGGC TCTCACTTAGCCCAGGCTCAGGTTCTCTTTCAGGGATTCAACTGGGAGTCATGGAAGAAG CAGGGTGGGTGGTACAACTTCCTCCATAGCCACGTCGACGACATCGCCGCGACCGGAGTC ACACACGTCTGGCTCCCGCCGCCGTCGCACTCCGTCGCGCCACAGGGATACATGCCGGGA CGGCTCTACGACCTGGACGCGTCCAAGTACGGGACGGGGGCAGAGCTCAGGTCGCTGATC GCCGCCTTCCACAGCAAGAGCATCAAGTGCGTCGCCGACATCGTCATCAACCACCGGTGC GCGGATTACAAGGATAGCCGTGGCATCTACTGCATCTTCGAGGGTGGCACGCCGGACAGC CGCCTCGACTGGGGTCCCGACATGATCTGCAGCGACGACACGCAGTACTCCAACGGCCGC GGTCACCGCGATACTGGCGCAGACTTCGGCGCGGCGCCCGACATCGACCACCTCAACACG CGTGTGCAGACAGAGCTCTCCGACTGGCTCAACTGGCTCAAGTCCGACGTCGGCTTCGAC GGCTGGCGCCTCGACTTCGCCAAGGGATACTCGGCGACCGTCGCCAAGACGTACGTGGAC AACACCGACCCGTCCTTCGTCGTCGCCGAGATATGGAGCAACATGCGTTACGACGGCAAC GGTGAGCCGTCGTGGAACCAGGACGGTGACCGGCAGGAGTTGGTGAACTGGGCGCAGGCC GTCGGTGGCCCTGCATCGGCGTTCGACTTCACGACCAAGGGCGAGCTGCAGGCAGCGGTG CAAGGTGAGCTGTGGCGGATGAAGGATGGCAACGGCAAGGCGCCGGGGATGATTGGCTGG CTGCCGGAGAAGGCTGTCACCTTCATCGACAATCATGACACTGGCTCCACACAGAACTCA TGGCCGTTCCCCTCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACACACCCTGGA GTACCCTGCATTTTCTACGACCATGTGTTTGACTGGAACTTGAAGCAGGAGATCAGCACA TTGGCCGCGGTGAGGTCAAGAAATGGAATTCATCCTGGGAGCAAGCTGAACATCCTTGCT GCTGACGGAGATGTCTACGTCGCCATGATCGATGACAAGGTGATCACAAAGATTGGGACT CGGTATGATGTGGGCAACTTGATCCCGTCAGACTTCCATGTCGTTGCTCACGGCAACAAT TACTGCGTCTGGGAAAAGAGTGGTCTTAGAGTTCCAGCAGGGCGGCGCCACTAG

Peptide Sequence

PEP ID	Os09t0457800-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:17303319:17304962:1 gene:Os09g0457800 transcript:Os09t0457800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3C description:Alpha-amylase isozyme 3C precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os09t0457800-01)
Sequence	MAKHSTTMSCLLFFVLLCLGSHLAQAQVLFQGFNWESWKKQGGWYNFLHSHVDDIAATGV THVWLPPPSHSVAPQGYMPGRLYDLDASKYGTGAELRSLIAAFHSKSIKCVADIVINHRC ADYKDSRGIYCIFEGGTPDSRLDWGPDMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNT RVQTELSDWLNWLKSDVGFDGWRLDFAKGYSATVAKTYVDNTDPSFVVAEIWSNMRYDGN GEPSWNQDGDRQELVNWAQAVGGPASAFDFTTKGELQAAVQGELWRMKDGNGKAPGMIGW LPEKAVTFIDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEIST LAAVRSRNGIHPGSKLNILAADGDVYVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNN YCVWEKSGLRVPAGRRH

Transcript Sequence

Transcript ID	Os09t0457800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:17303319:17304962:1 gene:Os09g0457800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3C description:Alpha-amylase isozyme 3C precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os09t0457800-01)
Sequence	ACACAACTCAGCTTGTATCTGAGACACGCAATGGCAAAGCATTCCACCACAATGAGCTGC CTCCTATTCTTCGTCTTGCTCTGTTTGGGCTCTCACTTAGCCCAGGCTCAGGTTCTCTTT CAGGGATTCAACTGGGAGTCATGGAAGAAGCAGGGTGGGTGGTACAACTTCCTCCATAGC CACGTCGACGACATCGCCGCGACCGGAGTCACACACGTCTGGCTCCCGCCGCCGTCGCAC TCCGTCGCGCCACAGGGATACATGCCGGGACGGCTCTACGACCTGGACGCGTCCAAGTAC GGGACGGGGGCAGAGCTCAGGTCGCTGATCGCCGCCTTCCACAGCAAGAGCATCAAGTGC GTCGCCGACATCGTCATCAACCACCGGTGCGCGGATTACAAGGATAGCCGTGGCATCTAC TGCATCTTCGAGGGTGGCACGCCGGACAGCCGCCTCGACTGGGGTCCCGACATGATCTGC AGCGACGACACGCAGTACTCCAACGGCCGCGGTCACCGCGATACTGGCGCAGACTTCGGC GCGGCGCCCGACATCGACCACCTCAACACGCGTGTGCAGACAGAGCTCTCCGACTGGCTC AACTGGCTCAAGTCCGACGTCGGCTTCGACGGCTGGCGCCTCGACTTCGCCAAGGGATAC TCGGCGACCGTCGCCAAGACGTACGTGGACAACACCGACCCGTCCTTCGTCGTCGCCGAG ATATGGAGCAACATGCGTTACGACGGCAACGGTGAGCCGTCGTGGAACCAGGACGGTGAC CGGCAGGAGTTGGTGAACTGGGCGCAGGCCGTCGGTGGCCCTGCATCGGCGTTCGACTTC ACGACCAAGGGCGAGCTGCAGGCAGCGGTGCAAGGTGAGCTGTGGCGGATGAAGGATGGC AACGGCAAGGCGCCGGGGATGATTGGCTGGCTGCCGGAGAAGGCTGTCACCTTCATCGAC AATCATGACACTGGCTCCACACAGAACTCATGGCCGTTCCCCTCCGACAAGGTCATGCAG GGCTACGCCTACATCCTCACACACCCTGGAGTACCCTGCATTTTCTACGACCATGTGTTT GACTGGAACTTGAAGCAGGAGATCAGCACATTGGCCGCGGTGAGGTCAAGAAATGGAATT CATCCTGGGAGCAAGCTGAACATCCTTGCTGCTGACGGAGATGTCTACGTCGCCATGATC GATGACAAGGTGATCACAAAGATTGGGACTCGGTATGATGTGGGCAACTTGATCCCGTCA GACTTCCATGTCGTTGCTCACGGCAACAATTACTGCGTCTGGGAAAAGAGTGGTCTTAGA GTTCCAGCAGGGCGGCGCCACTAGGCCAAATATTTCTTTCAGGACTATTTTGTGCCTGAA ATAAGAAGTTTAAATGATGTCTTAAATAACAAGAAAGTGATTGATTGATTGT