Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0457600-00
CDS Infomation	cds chromosome:IRGSP-1.0:9:17296197:17297688:1 gene:Os09g0457600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3B description:Alpha-amylase isozyme 3B precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os09t0457600-00)
Sequence	ATGGCAAAGCGCATAGCCTCAATGAGCAGCCTCCTCCTTATCGCCTTGCTCTGTCTGAGC TCTCACTTGGCCCAAGCCCAGGTCCTCTTCCAGGGGTTCAACTGGGAGTCGTGGAAGAAG CAGGGCGGGTGGTACAACTTCCTCCATGGCCACGTCGACGACATCGCCGCGACCGGTGTC ACGCACGTCTGGCTCCCACCGCCGTCGCACTCCGTCGCCCCGCAGGGATACATGCCGGGC CGGCTCTACGACCTGGACGCTTCCAAGTACGGCACGGGGGCAGAGCTCAGGTCGCTGATC GCCGCCTTCCACAGCAAAGGCATCAAGTGCGTCGCCGACATCGTCATCAACCACCGGTGC GCGGATTACAAGGATAGCCGTGGCATCTACTGCATTTTCGAGGGTGGCACGCCGGACAGC CGCCTCGACTGGGGCCCCGACATGATCTGCAGCGACGACACGCAGTACTCCAACGGCCGC GGTCACCGCGACACCGGCGCAGACTTCGGCGCGGCGCCCGACATCGACCACCTCAACACG CGTGTGCAGACAGAGCTGTCCGACTGGCTCAATTGGCTCAAGTCCGACGTCGGCTTCGAC GGCTGGCGCCTCGACTTCGCCAAGGGATACTCGGCGGCCGTCGCCAAGACGTACGTCGAC AACACCGACCCGTCCTTCGTCGTCGCCGAGATATGGAGCAACATGCGTTACGACGGCAAC GGTGAGCCGTCGTGGAACCAGGACGGTGACCGGCAGGAGCTGGTGAACTGGGCGCAGGCC GTCGGTGGCCCTGCGTCAGCGTTCGACTTCACGACCAAGGGCGAGCTGCAGGCGGCGGTG CAAGGTGAGCTGTGGCGGATGAAGGACGGCAACGGCAAGGCGCCGGGGATGATTGGCTGG CTGCCAGAGAAGGCCGTCACCTTCATCGACAACCATGACACTGGCTCCACACAGAACTCA TGGCCGTTCCCCTCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACACACCCTGGA GTACCCTGCATTTTCTACGACCATGTATTTGACTGGAACCTGAAGCAGGAGATCAGCACA TTAGCTGCAGTGAGATCAAGAAATGAGATTCATCCCGGGAGCAAGCTGAAAATCCTTGCT GCTGAGGGAGACGTCTATGTCGCCATGATCGATGATAAGGTCATAACAAAGATTGGGACA CGGTATGACGTGGGCAACTTAATCCCGTCAGACTTCCATGTCGTTGCTCACGGCAACAAT TACTGCATTTGGGAAAAGAGCGGTCTCAGAGTTCCTGCAGGGCGGCACCACTATTAG

Peptide Sequence

PEP ID	Os09t0457600-00
PEP Infomation	pep chromosome:IRGSP-1.0:9:17296197:17297688:1 gene:Os09g0457600 transcript:Os09t0457600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3B description:Alpha-amylase isozyme 3B precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os09t0457600-00)
Sequence	MAKRIASMSSLLLIALLCLSSHLAQAQVLFQGFNWESWKKQGGWYNFLHGHVDDIAATGV THVWLPPPSHSVAPQGYMPGRLYDLDASKYGTGAELRSLIAAFHSKGIKCVADIVINHRC ADYKDSRGIYCIFEGGTPDSRLDWGPDMICSDDTQYSNGRGHRDTGADFGAAPDIDHLNT RVQTELSDWLNWLKSDVGFDGWRLDFAKGYSAAVAKTYVDNTDPSFVVAEIWSNMRYDGN GEPSWNQDGDRQELVNWAQAVGGPASAFDFTTKGELQAAVQGELWRMKDGNGKAPGMIGW LPEKAVTFIDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEIST LAAVRSRNEIHPGSKLKILAAEGDVYVAMIDDKVITKIGTRYDVGNLIPSDFHVVAHGNN YCIWEKSGLRVPAGRHHY

Transcript Sequence

Transcript ID	Os09t0457600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:17296197:17297688:1 gene:Os09g0457600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-AMYLASE 3B description:Alpha-amylase isozyme 3B precursor (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase). (Os09t0457600-00)
Sequence	ATGGCAAAGCGCATAGCCTCAATGAGCAGCCTCCTCCTTATCGCCTTGCTCTGTCTGAGC TCTCACTTGGCCCAAGCCCAGGTCCTCTTCCAGGGGTTCAACTGGGAGTCGTGGAAGAAG CAGGGCGGGTGGTACAACTTCCTCCATGGCCACGTCGACGACATCGCCGCGACCGGTGTC ACGCACGTCTGGCTCCCACCGCCGTCGCACTCCGTCGCCCCGCAGGGATACATGCCGGGC CGGCTCTACGACCTGGACGCTTCCAAGTACGGCACGGGGGCAGAGCTCAGGTCGCTGATC GCCGCCTTCCACAGCAAAGGCATCAAGTGCGTCGCCGACATCGTCATCAACCACCGGTGC GCGGATTACAAGGATAGCCGTGGCATCTACTGCATTTTCGAGGGTGGCACGCCGGACAGC CGCCTCGACTGGGGCCCCGACATGATCTGCAGCGACGACACGCAGTACTCCAACGGCCGC GGTCACCGCGACACCGGCGCAGACTTCGGCGCGGCGCCCGACATCGACCACCTCAACACG CGTGTGCAGACAGAGCTGTCCGACTGGCTCAATTGGCTCAAGTCCGACGTCGGCTTCGAC GGCTGGCGCCTCGACTTCGCCAAGGGATACTCGGCGGCCGTCGCCAAGACGTACGTCGAC AACACCGACCCGTCCTTCGTCGTCGCCGAGATATGGAGCAACATGCGTTACGACGGCAAC GGTGAGCCGTCGTGGAACCAGGACGGTGACCGGCAGGAGCTGGTGAACTGGGCGCAGGCC GTCGGTGGCCCTGCGTCAGCGTTCGACTTCACGACCAAGGGCGAGCTGCAGGCGGCGGTG CAAGGTGAGCTGTGGCGGATGAAGGACGGCAACGGCAAGGCGCCGGGGATGATTGGCTGG CTGCCAGAGAAGGCCGTCACCTTCATCGACAACCATGACACTGGCTCCACACAGAACTCA TGGCCGTTCCCCTCCGACAAGGTCATGCAGGGCTACGCCTACATCCTCACACACCCTGGA GTACCCTGCATTTTCTACGACCATGTATTTGACTGGAACCTGAAGCAGGAGATCAGCACA TTAGCTGCAGTGAGATCAAGAAATGAGATTCATCCCGGGAGCAAGCTGAAAATCCTTGCT GCTGAGGGAGACGTCTATGTCGCCATGATCGATGATAAGGTCATAACAAAGATTGGGACA CGGTATGACGTGGGCAACTTAATCCCGTCAGACTTCCATGTCGTTGCTCACGGCAACAAT TACTGCATTTGGGAAAAGAGCGGTCTCAGAGTTCCTGCAGGGCGGCACCACTATTAG