Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0455200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:17109289:17111059:-1 gene:Os09g0455200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR B4C description:Heat shock factor (HSF)-type, DNA-binding domain containing protein. (Os09t0455200-01)
Sequence	ATGGAGCGGTGCGGGAGCTGGTCGGACTGCGAGGCGGCGGCGGCGGCGGCGCAGAAGGCG GTGCCGGCGCCGTTCTTGACCAAGACGTATCAGCTGGTGGATGACCCGGCCACTGACCAC ATCGTCTCGTGGGGGGACGACCGGGTGTCCACCTTCGTCGTGTGGCGGCCGCCGGAGTTC GCGCGCGACATCCTCCCCAACTACTTCAAGCACAACAACTTCTCGTCGTTCGTCCGCCAG CTCAACACCTACGGGTTCAGGAAGGTCGTGCCGGAGAGGTGGGAGTTCGCGAACGAGTTC TTCAGGAAGGGGGAGAAGCAGCTGCTCACCGAGATCCACCGCAGGAAGACGTCGTCCGCA TCGACGGCGTCGCCGTCTCCGCCGCCGTTCTTCGCGCCGCCGCACTTCCCTCTGTTCCAC CACCCCGGCGTCGCGGCGGCTCAGCACCACCACGCGTTCGTCGGCGACGACGGGGTTGTG GCGGCGCATGGCATCGGCATGCCGTTCCCGCAGCCGCATTGGCGGGAGCCGAACTTGCCG GTCGCGACGCGCCTGCTCGCGCTAGGCGGGCCCGCGCCGTCGCCGTCGTCGGCGGAGGCC GGCGGCGCCGGGCGCGCCGCCACCGCCGCGGTGCTGATGGAGGAGAACGAGCGCCTGCGG CGGAGCAACACGGCGCTGCTGCAGGAGCTTGCGCACATGCGCAAGCTGTACAACGACATC ATCTACTTCGTGCAGAACCACGTTCGTCCCGTGGCGCCGAGCCCGGCGGCGGCCGCGTTC CTGCAGGGCCTCGGCATGCAGGCGCGCAAGAAGCCCGCCGCCGCCAACGTGCTCAACAAC TCAGGCGGGAGCACAACGTCGAGCAGCTCGCTCACCATCGCCGAGGAGCCTTCCCCTCCG CCGCAGCAGCAGCATCTAGCCGGCGAGAAGAGCGGCGGGGAGGCAGGCAACAGCAGCGCC GCTCGGTCATCGGCGCCGACCAAGCTCTTCGGCGTGCACCTAAGCGCCGCCCCGTGCGGC GCCGGCAGCAAGAGAGCGTCTTCGCCGGAGGAGCACCCGCCCACGTCGCCGGCCACGAAG CCTCGCCTCGTGCTGGAGTGCGACGACCTAAGCCTGACCGTCGCGCCGTCGTCGTCGTCG CAGCAGCAGCTGTCAGCCGCCTCTTCTCCAACAAGCACCAGCTAG

Peptide Sequence

PEP ID	Os09t0455200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:17109289:17111059:-1 gene:Os09g0455200 transcript:Os09t0455200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR B4C description:Heat shock factor (HSF)-type, DNA-binding domain containing protein. (Os09t0455200-01)
Sequence	MERCGSWSDCEAAAAAAQKAVPAPFLTKTYQLVDDPATDHIVSWGDDRVSTFVVWRPPEF ARDILPNYFKHNNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLTEIHRRKTSSA STASPSPPPFFAPPHFPLFHHPGVAAAQHHHAFVGDDGVVAAHGIGMPFPQPHWREPNLP VATRLLALGGPAPSPSSAEAGGAGRAATAAVLMEENERLRRSNTALLQELAHMRKLYNDI IYFVQNHVRPVAPSPAAAAFLQGLGMQARKKPAAANVLNNSGGSTTSSSSLTIAEEPSPP PQQQHLAGEKSGGEAGNSSAARSSAPTKLFGVHLSAAPCGAGSKRASSPEEHPPTSPATK PRLVLECDDLSLTVAPSSSSQQQLSAASSPTSTS

Transcript Sequence

Transcript ID	Os09t0455200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:17109289:17111059:-1 gene:Os09g0455200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HEAT STRESS TRANSCRIPTION FACTOR B4C description:Heat shock factor (HSF)-type, DNA-binding domain containing protein. (Os09t0455200-01)
Sequence	GGCCACTCGTAAACCCCGAGAAACCTTGGCGGCTTGGCCGACTCCTCGTCTCTCCGGTTG ATACTGTTGTGGAGTAGTGTAGTGGTAGCGAGCTCGTAGATCTTCTTGGTAGATGGAGCG GTGCGGGAGCTGGTCGGACTGCGAGGCGGCGGCGGCGGCGGCGCAGAAGGCGGTGCCGGC GCCGTTCTTGACCAAGACGTATCAGCTGGTGGATGACCCGGCCACTGACCACATCGTCTC GTGGGGGGACGACCGGGTGTCCACCTTCGTCGTGTGGCGGCCGCCGGAGTTCGCGCGCGA CATCCTCCCCAACTACTTCAAGCACAACAACTTCTCGTCGTTCGTCCGCCAGCTCAACAC CTACGGGTTCAGGAAGGTCGTGCCGGAGAGGTGGGAGTTCGCGAACGAGTTCTTCAGGAA GGGGGAGAAGCAGCTGCTCACCGAGATCCACCGCAGGAAGACGTCGTCCGCATCGACGGC GTCGCCGTCTCCGCCGCCGTTCTTCGCGCCGCCGCACTTCCCTCTGTTCCACCACCCCGG CGTCGCGGCGGCTCAGCACCACCACGCGTTCGTCGGCGACGACGGGGTTGTGGCGGCGCA TGGCATCGGCATGCCGTTCCCGCAGCCGCATTGGCGGGAGCCGAACTTGCCGGTCGCGAC GCGCCTGCTCGCGCTAGGCGGGCCCGCGCCGTCGCCGTCGTCGGCGGAGGCCGGCGGCGC CGGGCGCGCCGCCACCGCCGCGGTGCTGATGGAGGAGAACGAGCGCCTGCGGCGGAGCAA CACGGCGCTGCTGCAGGAGCTTGCGCACATGCGCAAGCTGTACAACGACATCATCTACTT CGTGCAGAACCACGTTCGTCCCGTGGCGCCGAGCCCGGCGGCGGCCGCGTTCCTGCAGGG CCTCGGCATGCAGGCGCGCAAGAAGCCCGCCGCCGCCAACGTGCTCAACAACTCAGGCGG GAGCACAACGTCGAGCAGCTCGCTCACCATCGCCGAGGAGCCTTCCCCTCCGCCGCAGCA GCAGCATCTAGCCGGCGAGAAGAGCGGCGGGGAGGCAGGCAACAGCAGCGCCGCTCGGTC ATCGGCGCCGACCAAGCTCTTCGGCGTGCACCTAAGCGCCGCCCCGTGCGGCGCCGGCAG CAAGAGAGCGTCTTCGCCGGAGGAGCACCCGCCCACGTCGCCGGCCACGAAGCCTCGCCT CGTGCTGGAGTGCGACGACCTAAGCCTGACCGTCGCGCCGTCGTCGTCGTCGCAGCAGCA GCTGTCAGCCGCCTCTTCTCCAACAAGCACCAGCTAGTCAAGTCAGCACGCATGCAAACG CCAACGCGACTCCATGCAACGACGACGACCATTTTGCTGTTCTAATCCGACGCGTTTAGC TTCCTAGTTAGCTCACCTCTTCTGTTCTCGCGGTCAAGGTTAGGGTTCTAATTCCGCAGC GGTGCAAAAGCCCAAGTGGGTTAAACCTTGGTGCAAGCCACCGTGTGCCCAACTAATCGA ACAAGCAAATCAGGTTTTCTGTACAGATGTAACGCAGCGTCGCCACTACCACCACATAAC GTACATACTCGGTACTGGAGTATAGTACGGTGCGTAGCAGCAGCCGAGAGGCTGACCCCT GGACCGTGATAATGCTTCAAGAATCCAACGATCTTTTGGACGACAAGTCCGGAAAGGGAA GCC