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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0453200-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:16996543:16999431:1 gene:Os09g0453200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transmembrane emp24 domain-containing protein 10. (Os09t0453200-00)
Sequence

ATGGCGCGACGTGGCGGCGCGTGGGCGTGGGCGGCGACGGCGGCCGCATTGCTGTGGTGG
ATGGCGGCGGGAGCCGGGGCGGTGTGGCTGGAGATCCCGCCGTCGGCGACCAAGTGTGTG
TCGGAGGAGATCCAGTCCAACGTCGTCGTCATCGGCGACTACTCCGTCCTCTACGAGCAC
CACCTCAACCCCACCGTCACCGTCAAGGTTACATCCCCTTTTGGAGACATTGTACATCAT
AAACAAAAGGTTTCCACAGGCCAGTTTTCATTCACAACTGCAGAAGCAGGAAACTACTTG
GCTTGCTTCTCGGCTGATGGTCGGAACAAGAGGTTAGTGGTGAAACTAAATCTTGACTGG
AGAGTTGGTATTGCAACAAAAGATTGGGATTCTGTTGCTAAAAAGGAAAAGCTCGAGGGA
GTTGAACTAGAATTAGTCAAGCTTGAAACCTCTGTCCAAGCAATACATGAAAACCTGCTC
TTGCTGAGATCCAAAGAAGCAAATATGAGAGATACCAGTGAGAAGACGAATGCTAGGGCT
ACATGGTTGAGCATCATATCACTCATTGTTTGCATTATAGTCTCAGTTTTGCAACTTTGG
CATCTACAACAGTACTTCCGAAAGAAGAAGCTCATCTGA

Peptide Sequence

PEP ID

Os09t0453200-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:16996543:16999431:1 gene:Os09g0453200 transcript:Os09t0453200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transmembrane emp24 domain-containing protein 10. (Os09t0453200-00)
Sequence

MARRGGAWAWAATAAALLWWMAAGAGAVWLEIPPSATKCVSEEIQSNVVVIGDYSVLYEH
HLNPTVTVKVTSPFGDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRNKRLVVKLNLDW
RVGIATKDWDSVAKKEKLEGVELELVKLETSVQAIHENLLLLRSKEANMRDTSEKTNARA
TWLSIISLIVCIIVSVLQLWHLQQYFRKKKLI

Transcript Sequence

Transcript ID

Os09t0453200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:16996543:16999431:1 gene:Os09g0453200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transmembrane emp24 domain-containing protein 10. (Os09t0453200-00)
Sequence

CAGGGGAAGGCGATGGCGCGACGTGGCGGCGCGTGGGCGTGGGCGGCGACGGCGGCCGCA
TTGCTGTGGTGGATGGCGGCGGGAGCCGGGGCGGTGTGGCTGGAGATCCCGCCGTCGGCG
ACCAAGTGTGTGTCGGAGGAGATCCAGTCCAACGTCGTCGTCATCGGCGACTACTCCGTC
CTCTACGAGCACCACCTCAACCCCACCGTCACCGTCAAGGTTACATCCCCTTTTGGAGAC
ATTGTACATCATAAACAAAAGGTTTCCACAGGCCAGTTTTCATTCACAACTGCAGAAGCA
GGAAACTACTTGGCTTGCTTCTCGGCTGATGGTCGGAACAAGAGGTTAGTGGTGAAACTA
AATCTTGACTGGAGAGTTGGTATTGCAACAAAAGATTGGGATTCTGTTGCTAAAAAGGAA
AAGCTCGAGGGAGTTGAACTAGAATTAGTCAAGCTTGAAACCTCTGTCCAAGCAATACAT
GAAAACCTGCTCTTGCTGAGATCCAAAGAAGCAAATATGAGAGATACCAGTGAGAAGACG
AATGCTAGGGCTACATGGTTGAGCATCATATCACTCATTGTTTGCATTATAGTCTCAGTT
TTGCAACTTTGGCATCTACAACAGTACTTCCGAAAGAAGAAGCTCATCTGAAATTATATC
TGTAACGTAGTCCACCAAAACATGCGTACCCTACTTCTATGTTTTATCTATTGAAGATAA
GGCTTGGCTATTT