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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0453000-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:16989810:16990373:-1 gene:Os09g0453000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0220 domain containing protein. (Os09t0453000-01);Similar to transmembrane protein 50A. (Os09t0453000-02)
Sequence

ATGGAGAATCTTGCGCTGCTTTGGGGGATCATCGGGCCGGGAGTCGCCGGTGCGGTCTTC
GGCGCCGGGTGGTGGTTCTGGGTCGACGCCGTCGTCTGCAGCTCCGTCCAGGTCTCCTTC
CTCCACTACCTACCCGGGATATTCGCGTCGCTGGCCGCGCTCATGTTCAACGCCGTGAAC
AAGGATGAGATCGGATACGACTATTACTCGCCCTACGGGGACGATTCCGAGTGGAGGTGA

Peptide Sequence

PEP ID

Os09t0453000-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:16989810:16990373:-1 gene:Os09g0453000 transcript:Os09t0453000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0220 domain containing protein. (Os09t0453000-01);Similar to transmembrane protein 50A. (Os09t0453000-02)
Sequence

MENLALLWGIIGPGVAGAVFGAGWWFWVDAVVCSSVQVSFLHYLPGIFASLAALMFNAVN
KDEIGYDYYSPYGDDSEWR

Transcript Sequence

Transcript ID

Os09t0453000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:16989810:16990373:-1 gene:Os09g0453000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0220 domain containing protein. (Os09t0453000-01);Similar to transmembrane protein 50A. (Os09t0453000-02)
Sequence

GCTTCGTCGACGAGGAGGGAGTTGGTGGTGGAGGAGAGGTCGCCGCCATGGAGAATCTTG
CGCTGCTTTGGGGGATCATCGGGCCGGGAGTCGCCGGTGCGGTCTTCGGCGCCGGGTGGT
GGTTCTGGGTCGACGCCGTCGTCTGCAGCTCCGTCCAGGTCTCCTTCCTCCACTACCTAC
CCGGGATATTCGCGTCGCTGGCCGCGCTCATGTTCAACGCCGTGAACAAGGATGAGATCG
GATACGACTATTACTCGCCCTACGGGGACGATTCCGAGTGGAGGTGAGGTTATTGTTTGA
TTAGGACCTAATTGATTGAATTGCGTATAGGCTAGTGAAGTCTGGATATTCGAATTGGAA
CCTTTAGATGTTATTTTGCGGAGTGAACAGCGTAGTGTCATGGTCACGTTATCTGCAATG
TACTATTTAAGAAAGAAATGTTATGGTGAGTTGATTGTTTCTGAG