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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0452700-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:16973695:16975737:1 gene:Os09g0452700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin. (Os09t0452700-00)
Sequence

ATGCAGATCTTCGTGAAGACGCTCACCGGGAAGACGATCACGCTGGAGGTGGAGAGCAGC
GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCGGACCAG
CAGCGTCTCATCTTCGCGGGGAAGCAGCTCGAGGATGGCCGCACCCTGGCCGACTACAAC
ATTCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGCCTCCGCGGTGGCAGCAGGGGCGGC
TACCCCAAGGGGATCGAGCCCAACCTCCGCGAGCTCGCGCAGAAGTACAACGAGAACAAG
CTGGTTTGCCGCAGGTGCTATGCACGCCTTCCCCTCAGGTCCACCAACTGCCGCAAGAAG
AAGTGTGGCCACAGCAATGAGATAAGGGCAAAGAAGAGGTTTATGTCCAAGCTTTCGAAG
TGA

Peptide Sequence

PEP ID

Os09t0452700-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:16973695:16975737:1 gene:Os09g0452700 transcript:Os09t0452700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin. (Os09t0452700-00)
Sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGSRGGYPKGIEPNLRELAQKYNENKLVCRRCYARLPLRSTNCRKK
KCGHSNEIRAKKRFMSKLSK

Transcript Sequence

Transcript ID

Os09t0452700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:16973695:16975737:1 gene:Os09g0452700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin. (Os09t0452700-00)
Sequence

CACATTACCGCCTCCATTTTTGCACCGGCCGCCACTAATCTGCGGGAGAGAGCGTTCGTT
CGTTCGCCGGCGAGAGGGAGAGTGGCAAGATGCAGATCTTCGTGAAGACGCTCACCGGGA
AGACGATCACGCTGGAGGTGGAGAGCAGCGACACCATCGACAACGTCAAGGCCAAGATCC
AGGACAAGGAAGGTATCCCGCCGGACCAGCAGCGTCTCATCTTCGCGGGGAAGCAGCTCG
AGGATGGCCGCACCCTGGCCGACTACAACATTCAGAAGGAGTCGACGCTTCACCTGGTGC
TCCGCCTCCGCGGTGGCAGCAGGGGCGGCTACCCCAAGGGGATCGAGCCCAACCTCCGCG
AGCTCGCGCAGAAGTACAACGAGAACAAGCTGGTTTGCCGCAGGTGCTATGCACGCCTTC
CCCTCAGGTCCACCAACTGCCGCAAGAAGAAGTGTGGCCACAGCAATGAGATAAGGGCAA
AGAAGAGGTTTATGTCCAAGCTTTCGAAGTGAACCACTGGAAAGCTCCGTCGTGGATCAG
TTCAATCGACCGCCTTGCAGCTTTTATACCTTCTTATTAGTTACTTTGTCTCTTCATGGA
GAGATGCTTATGAGATTTTGCTTTCAAGTTTCTGTTACTGGATTTTGGACAAATCTCTAT
GAATAAAGTTTTGGTATAAAATTTTATTTACTGCCCAGCTAAATTCTTTTGGGCTTATGT
GAACGAGCATCCATACTTATCATGTTGAAAGTATGTATTCTTAAATTAACAATGGAATAA
CAATTAGTAT