Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0452200-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:16958659:16962049:1 gene:Os09g0452200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lysin motif-containing protein 4, lysin motif (LysM)-containing protein 4, LysM-containing protein 4 description:Lysin motif-containing protein, Pattern recognition receptor, Peptidoglycan and chitin perception in innate immunity (Os09t0452200-01);Similar to LysM-domain GPI-anchored protein 1 precursor. Splice isoform 2. (Os09t0452200-02)
Sequence	ATGCCACCACCCTTGCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCGTCGCGCCC GCGCGGTCCAAGTCGACGCTGGAGTCCTGCTCCTCTTCCACCGCCTGCCCAGCGCTGCTC TCCTACACGCTCTACGCCGACCTCAAGCTCGCCGAGCTGGCCGCGCTCTTCTCCGCCGAC CCGCTCGCCATCCTCGCCGCCAACTCCATCGACTTCGCCGTCCCGGACCCCGCCGACCGC ATCCTCCCCGCGGGGCTCCCGCTCCGCGTGCCCGTCCCCTGCGCCTGCTCCGACGGCATC CGCAGGGTCACCACCGTGCGCTACGTTGCGCGCCCGGGCGACACGCTCGCCTCCGTCGCC TCCTCCGTCTACGGCGGCCTCACCACCCCGGACTGGATCAGCGACTCCAACGGCATCCTC GGCGCCAAGCCCGACGCCGCCGTCGACGCCGGGACGACTCTGTTCGTGCCGCTGCACTGC GCCTGCTTCGGCGGCGTCGACAACGGCCTCCCCGCGGTGTACCTCACGTACGTCGCCGGG AAGGGGGACACCGTCGCCGCAGTCGCGCAGAGGTACCGGACCACGGCCACCGACCTCATG AGCGTCAACGACATGGCCACCCCCGAGCTCGCCGCCGGTGACATCATCGTCGTCCCGCTG CCAGCGTGCACATCATCATTCCCGGCGTTCACGGCGGACTACGGCCTGGCGGTGGCGAAC GGGACCTACGCAGTTACTGCCAACCGGTGTGTCCAGTGCAGCTGTGGCCCAGGCAACTTG GACCTGTTCTGCGTGCCGGCGCCGCTCGCCGACTCGACGTGCTCCAGCATGCAGTGCGCC AACAGCAGCATGATGCTCGGCAACTTCACTCTCCTCATGACCAGCTCCGGCTGCAGCGTC ACGTCCTGCAGCTACGGCGGATTCGTGAACGGCACAATTCTCACCACGTTAACCACAGCA CTCAAGCCTCAATGCCCAGGTCCGCATCAGTATCCTCCGCTGATTCCGCCGCCGACGTCG TCCTTCTTCGAGACGTACCTCGGCCCTTCGCCGACGCCGATGGCATCCGAAGGAGGCGTC ATGGCCGGCATGGCGCCGACGAGCACCCCGGCGGCGAGCTCCGGCCCTCCTCCGGCCGGC CGGCACGTCGTCGGCGACGTTCTTGGGGCGTTCGCTCTCTGCCTCGTCGGCAACCTGCTG TGGTAA

Peptide Sequence

PEP ID	Os09t0452200-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:16958659:16962049:1 gene:Os09g0452200 transcript:Os09t0452200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lysin motif-containing protein 4, lysin motif (LysM)-containing protein 4, LysM-containing protein 4 description:Lysin motif-containing protein, Pattern recognition receptor, Peptidoglycan and chitin perception in innate immunity (Os09t0452200-01);Similar to LysM-domain GPI-anchored protein 1 precursor. Splice isoform 2. (Os09t0452200-02)
Sequence	MPPPLLLLLLLAAAAAAVAPARSKSTLESCSSSTACPALLSYTLYADLKLAELAALFSAD PLAILAANSIDFAVPDPADRILPAGLPLRVPVPCACSDGIRRVTTVRYVARPGDTLASVA SSVYGGLTTPDWISDSNGILGAKPDAAVDAGTTLFVPLHCACFGGVDNGLPAVYLTYVAG KGDTVAAVAQRYRTTATDLMSVNDMATPELAAGDIIVVPLPACTSSFPAFTADYGLAVAN GTYAVTANRCVQCSCGPGNLDLFCVPAPLADSTCSSMQCANSSMMLGNFTLLMTSSGCSV TSCSYGGFVNGTILTTLTTALKPQCPGPHQYPPLIPPPTSSFFETYLGPSPTPMASEGGV MAGMAPTSTPAASSGPPPAGRHVVGDVLGAFALCLVGNLLW

Transcript Sequence

Transcript ID	Os09t0452200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:16958659:16962049:1 gene:Os09g0452200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:lysin motif-containing protein 4, lysin motif (LysM)-containing protein 4, LysM-containing protein 4 description:Lysin motif-containing protein, Pattern recognition receptor, Peptidoglycan and chitin perception in innate immunity (Os09t0452200-01);Similar to LysM-domain GPI-anchored protein 1 precursor. Splice isoform 2. (Os09t0452200-02)
Sequence	ACTCTCACTGGCTCGCAGTCGCACACACTCCCACGCCTCCGCGCTCCCGACCACCGTCGC CATCATCATGCCACCACCCTTGCTCCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCGT CGCGCCCGCGCGGTCCAAGTCGACGCTGGAGTCCTGCTCCTCTTCCACCGCCTGCCCAGC GCTGCTCTCCTACACGCTCTACGCCGACCTCAAGCTCGCCGAGCTGGCCGCGCTCTTCTC CGCCGACCCGCTCGCCATCCTCGCCGCCAACTCCATCGACTTCGCCGTCCCGGACCCCGC CGACCGCATCCTCCCCGCGGGGCTCCCGCTCCGCGTGCCCGTCCCCTGCGCCTGCTCCGA CGGCATCCGCAGGGTCACCACCGTGCGCTACGTTGCGCGCCCGGGCGACACGCTCGCCTC CGTCGCCTCCTCCGTCTACGGCGGCCTCACCACCCCGGACTGGATCAGCGACTCCAACGG CATCCTCGGCGCCAAGCCCGACGCCGCCGTCGACGCCGGGACGACTCTGTTCGTGCCGCT GCACTGCGCCTGCTTCGGCGGCGTCGACAACGGCCTCCCCGCGGTGTACCTCACGTACGT CGCCGGGAAGGGGGACACCGTCGCCGCAGTCGCGCAGAGGTACCGGACCACGGCCACCGA CCTCATGAGCGTCAACGACATGGCCACCCCCGAGCTCGCCGCCGGTGACATCATCGTCGT CCCGCTGCCAGCGTGCACATCATCATTCCCGGCGTTCACGGCGGACTACGGCCTGGCGGT GGCGAACGGGACCTACGCAGTTACTGCCAACCGGTGTGTCCAGTGCAGCTGTGGCCCAGG CAACTTGGACCTGTTCTGCGTGCCGGCGCCGCTCGCCGACTCGACGTGCTCCAGCATGCA GTGCGCCAACAGCAGCATGATGCTCGGCAACTTCACTCTCCTCATGACCAGCTCCGGCTG CAGCGTCACGTCCTGCAGCTACGGCGGATTCGTGAACGGCACAATTCTCACCACGTTAAC CACAGCACTCAAGCCTCAATGCCCAGGTCCGCATCAGTATCCTCCGCTGATTCCGCCGCC GACGTCGTCCTTCTTCGAGACGTACCTCGGCCCTTCGCCGACGCCGATGGCATCCGAAGG AGGCGTCATGGCCGGCATGGCGCCGACGAGCACCCCGGCGGCGAGCTCCGGCCCTCCTCC GGCCGGCCGGCACGTCGTCGGCGACGTTCTTGGGGCGTTCGCTCTCTGCCTCGTCGGCAA CCTGCTGTGGTAACAGAGCGGCTCTCGCCGTTGATGCTACATAATTTTGTACAGAAGCTG TGGCCGGCTGTGTTTTTGTCGGGCAGCGTCGGGTTGTGCCCAATTTTTGTTGCGTTCATT CGATTTGTCTGCCACTCACTCCTGTGGAATGGCAAACACAATTACAGAAGCGCAGATCTC TCCAGCGCGGCTGTAATGGTCCTGAATTCCTGATGCTATTGAGAATGTGAGTACCGAGTA GTGTGCTTTTTATCG