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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0451800-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:16945131:16947984:-1 gene:Os09g0451800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1644 family protein. (Os09t0451800-01)
Sequence

ATGACTAAAAGTATAAGGGGCAAGAAATGTTCATCTCGTCAGCTCAGATCACATAATCGG
AGGCTCTTCAGCCAATGCAATTTCAAGAGAGTTGCTAACAAGGAATTGGCAGCAACAGAG
AAATGTGCGTGGAAAGATTCAATCTGTCCAGTTTGCTTGGAATGCCCACATAATGCTGTC
CTTCTACTTTGTTCGTCTCATGATAAAGGTTGTCGTCCATATATATGTGCAACCAATTAC
CACCATTCAAACTGTCTTGATCAACTCATAGATTCGCGGAGAAGCTCAAAAGATTGTGAG
GACCTAGACTCCATAGAGCTTACATGCCCCCTTTGCCGTGGTGAGGTTAAGGGATATACA
TTGGTTGAACCTGCTCGGGAACAGTTGAACCAAAACAAGAGGAGCTGTATGCAAGATGGT
TGCTCATACATGGGTAGTTATGGAGAGCTCTGCAAGCATGTAAGAAAGAAGCATCCTTCA
GTGAAGCCTCATTCTGTGGACCCTGTACATACTTACAGATGGAGGCGACTTTTATTCCGG
AGTTCACTGCAAGATATGATCTGTGCAACGAGTTCACCAATGGTGCGGAGGGTTTTGTAT
GTTATGTTGCAGTTTGAGGAGTTGATGGCATCTGTTTGGCACGAAGGTCCTCATGGAGCT
ATGCAAATCAATGAAATGAACTTGGCTGATCCATGA

Peptide Sequence

PEP ID

Os09t0451800-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:16945131:16947984:-1 gene:Os09g0451800 transcript:Os09t0451800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1644 family protein. (Os09t0451800-01)
Sequence

MTKSIRGKKCSSRQLRSHNRRLFSQCNFKRVANKELAATEKCAWKDSICPVCLECPHNAV
LLLCSSHDKGCRPYICATNYHHSNCLDQLIDSRRSSKDCEDLDSIELTCPLCRGEVKGYT
LVEPAREQLNQNKRSCMQDGCSYMGSYGELCKHVRKKHPSVKPHSVDPVHTYRWRRLLFR
SSLQDMICATSSPMVRRVLYVMLQFEELMASVWHEGPHGAMQINEMNLADP

Transcript Sequence

Transcript ID

Os09t0451800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:16945131:16947984:-1 gene:Os09g0451800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1644 family protein. (Os09t0451800-01)
Sequence

CCCAGCAACCAACCTCTCGTCTCCGCCGCTTCGCCCTCCTCCGGCCGCCCGTGCAGGCGG
TGCAGCCTCCCCTCCCCCGTCTCCTCCCTACCTCGGGGGGAAACGGGGCCCCGCGGTGCT
ATTACCAAGATGACTAAAAGTATAAGGGGCAAGAAATGTTCATCTCGTCAGCTCAGATCA
CATAATCGGAGGCTCTTCAGCCAATGCAATTTCAAGAGAGTTGCTAACAAGGAATTGGCA
GCAACAGAGAAATGTGCGTGGAAAGATTCAATCTGTCCAGTTTGCTTGGAATGCCCACAT
AATGCTGTCCTTCTACTTTGTTCGTCTCATGATAAAGGTTGTCGTCCATATATATGTGCA
ACCAATTACCACCATTCAAACTGTCTTGATCAACTCATAGATTCGCGGAGAAGCTCAAAA
GATTGTGAGGACCTAGACTCCATAGAGCTTACATGCCCCCTTTGCCGTGGTGAGGTTAAG
GGATATACATTGGTTGAACCTGCTCGGGAACAGTTGAACCAAAACAAGAGGAGCTGTATG
CAAGATGGTTGCTCATACATGGGTAGTTATGGAGAGCTCTGCAAGCATGTAAGAAAGAAG
CATCCTTCAGTGAAGCCTCATTCTGTGGACCCTGTACATACTTACAGATGGAGGCGACTT
TTATTCCGGAGTTCACTGCAAGATATGATCTGTGCAACGAGTTCACCAATGGTGCGGAGG
GTTTTGTATGTTATGTTGCAGTTTGAGGAGTTGATGGCATCTGTTTGGCACGAAGGTCCT
CATGGAGCTATGCAAATCAATGAAATGAACTTGGCTGATCCATGATCTCAACCTCACTGA
AATGTGAGAATATCTTATGCTGTTCTCGCAATGGGGTCAGTGATTTGAGCCATGCTGATC
CATCATGTGTGACCTGACACAGAAAGATATAGCTTTTTTAGTTTTCTGTTCTTGAGGGAA
TATTTGTCACCATCTTCAGAAGAAACAGATCCTATCCTATGCTGCCATGAATTCAAGAAA
CCTGGTCAAATTGTGGGTGGAATGTGGAATGGCGTTGAAGGCTTTTGTTGATACTATCTC
ATTGTAGTCCCCCCTTTGTGTCGTGTGATGAATTGATCCTGTGCATCCCTTTTGCACTGT
ATTGACATTACATTCTATTCGGAAATGCAGAGTTCACTTGCTCCTGT