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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0450600-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:16875034:16876024:1 gene:Os09g0450600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein HVA22. (Os09t0450600-00)
Sequence

ATGGGTAAAACATGGGCACTCATTAGCCACCTCCATGCTTTTGCCGGGTATTATAAAAGA
GTGTTGAATTGGATCAGGTACGCGTCGATCTGCGCGATGGAGAGCACGTCCAAGGTGGAC
GACGAGCAATGGCTGGTGTACTGGATACTGTACTCCCTCATCACCCTCATGGAAATGGCA
CTCCATAAAGTCTTGTACTGGATACCGTTATGGTACGAGGCGAAGGTCCTGTTCGTGGCG
TGGCTGGTGCTGCCTCAGTTCAGGGGGGCGTCGTTCATCTACGACAAGTTCGTCAGGGAG
CAGCTCAAGAAGAACAGGGTGAAGCTGCACGAACACCACGGCCATGGCCATGGCCACGCC
GACGAGCACCAGTCGCACGTCGTCAGAGGTAAGCTACTACTCTACCAAAGTACTTTTGTG
CTGATCATGTCAACACGGAGCGGCGCCATCTTTGGAGAATTTGGGTTTAGTTTTGTGTGT
GAAGGCATCTAA

Peptide Sequence

PEP ID

Os09t0450600-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:16875034:16876024:1 gene:Os09g0450600 transcript:Os09t0450600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein HVA22. (Os09t0450600-00)
Sequence

MGKTWALISHLHAFAGYYKRVLNWIRYASICAMESTSKVDDEQWLVYWILYSLITLMEMA
LHKVLYWIPLWYEAKVLFVAWLVLPQFRGASFIYDKFVREQLKKNRVKLHEHHGHGHGHA
DEHQSHVVRGKLLLYQSTFVLIMSTRSGAIFGEFGFSFVCEGI

Transcript Sequence

Transcript ID

Os09t0450600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:16875034:16876024:1 gene:Os09g0450600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein HVA22. (Os09t0450600-00)
Sequence

GGACGCCACGTCCAAGCTAGGCACCCGATGCCATCCCCCCGCATCGCCGTCAACTTGTAG
CGCGCGGCTGCGACCGTATAAAACCACCCCGTTCCCTCAAGCAAGCTAAGGCCTATGCTA
CTGGATCTCTTCGCGTCCCATCTCCTAGCCCATCAAACTCCAAAATCAACCTTCGTTGAG
TGATTTGGTTGGATATCGGAAGGAAAGAGATGGGTAAAACATGGGCACTCATTAGCCACC
TCCATGCTTTTGCCGGGTATTATAAAAGAGTGTTGAATTGGATCAGGTACGCGTCGATCT
GCGCGATGGAGAGCACGTCCAAGGTGGACGACGAGCAATGGCTGGTGTACTGGATACTGT
ACTCCCTCATCACCCTCATGGAAATGGCACTCCATAAAGTCTTGTACTGGATACCGTTAT
GGTACGAGGCGAAGGTCCTGTTCGTGGCGTGGCTGGTGCTGCCTCAGTTCAGGGGGGCGT
CGTTCATCTACGACAAGTTCGTCAGGGAGCAGCTCAAGAAGAACAGGGTGAAGCTGCACG
AACACCACGGCCATGGCCATGGCCACGCCGACGAGCACCAGTCGCACGTCGTCAGAGGTA
AGCTACTACTCTACCAAAGTACTTTTGTGCTGATCATGTCAACACGGAGCGGCGCCATCT
TTGGAGAATTTGGGTTTAGTTTTGTGTGTGAAGGCATCTAA