Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0442900-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:16477066:16481692:1 gene:Os09g0442900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Axi 1 (Auxin-independent growth promoter)-like protein. (Os09t0442900-01)
Sequence	ATGGGCTACCACCAGCCCGTACACGGCGGCGCCGCGGCCGGTGCCGGCGGGAGTGGCGGC GGTGGCGGCGGCGACCACCTGCATCAGCATCACCACCCGCGGTTGCACAGCCCGCGGATA TCCGGGGGCGGGTCGATGACCCGGCGTGCCAACTCGTTCAAGCGCGGGGAGATCGAGCTC CAGATCGGCTCGCCGCGCTCGCCCCGCGGCGACGGCGTCGGGAGCCCCCTCGCCGAGTCG TCGTCGGCGTCCGAGGCGTCCGCGGGCGGCGGCGGCGCGGTCCACCACCACCACCACCAG AGCCAGCAGCAGCAGCTCCGGTTCCGCCTCTTCAAGCGGCCGGGGTCCGGCGCCGGGGAG GTCGTGCTCGGGCTGGGGATCCGGGAGAGGAGGCGGATTGGGAACCTGCTGTTCCTCGCG TTCTGCGGCGTGTGCCTGCTCCTCGGCGTCGCCAAGATCTGGGCGGGCGGCTGGTTCGCC CTCCCCGGCGACGACAAGGACGCTGATTTGCAGGATCTCTCAATCTCATTCTCCAGTGAT GGAGGGTATCAATTTGATAGCCACTTTGGACATGTTGGAGGGAAAGAGAGTGACAGGATG TTGATGACAGTGGGATCAGAAGACAGTGTTCCTGAGGCCCCCGATGTCTGGTCCCAGCCA AGCAGCGGAAAGTTCAGACAATGCATTATTTCGAATTCTCATAAAAAGGAAGATTCTCAC ACAAATGGATACATTCTCATTAACGCAAATGGAGGTTTGAATCAAATGCGGTTTGGGATA TGCGATATGGTTGCTGTTGCTAAGATCCTGAAGGCTACATTGGTTCTACCTTCACTTGAT CATACATCTTTCTGGGCAGATGACAGTGAATTTAAGGACCTTTTCAATTGGAGACACTTC ATTGAGTCACTCAAAGAAGACATTGATATTGTTGAAATGCTGCCCCCAGCATACAAGCAT ATTGAGCCTGTGGCTAAAGCTCCAATATCTTGGTCAAAGGTGAATTATTATAGAGATGAA ATTCTCCCTCTTTTGAAAAAACACAAAGTCATTTACTTTACGCATACAGATTCTCGCCTT GCCAACAATGGTCTTCCTAGTTATATTCAGAAATTAAGATGCCGAGTTAACTATAGGTCT TTGAAGTATTCCCAAACAATTGAAGATCTTGGTGCTACCTTGGTTTCACGGATGCATCAG GATGGAAGCCCATATCTTGCTCTCCATCTAAGGTTTGAGAAGGATATGCTAGCTTTTACT GGTTGCAGCCATAGCCTGACATCAGAAGAAGAAGAAGAATTGCGTAAAATGCGTTATGAG GTTAGTCATTGGAAAGAGAAAGAAATAAATGGAACTGAGAGAAGAAGTATGGGTGGTTGT CCTTTGACTCCCAGGGAAACTTCGTTTTTACTCAAAGGATTGGGTTTCACACGAAGCACC AGAATCTACTTGGTTGCAGGTGAAGCTTTTGGCAATGGAAGCATGCAGGCGCTGATGGAT GATTTTCCCAATATATATTCTCATTCTACCCTTGCAACAAAAGAGGAACTTGAGCCCTTT AGAAATCACCAAAATATGCTTGCTGGTCTTGACTACATTGTAGCTCTCCAGAGTGATGTC TTTCTTTACACGTATGATGGTAATATGGCCAAAGCTGTACAAGGTCATAGGCGTTTCGAG AACTTCAGGAAGACGATCAACCCGGATAGGATGAGTTTCGTGAACCTGATAGATGAATAT GATGAAGGAAGGATGTCTTGGGATGACTTCAGCTCAGAAGTGAAACGTATACATAGAGAT GGAGAGCGAATAGGGGCTCCATATCTCAGGGAGCCTGGGGAATTCCCCAAGCTAGAAGAG TCTTTCTTTGCAAATCCGTTGCCGGGCTGTATATGTGAGAAGCTTAATGACGAGTGA

Peptide Sequence

PEP ID	Os09t0442900-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:16477066:16481692:1 gene:Os09g0442900 transcript:Os09t0442900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Axi 1 (Auxin-independent growth promoter)-like protein. (Os09t0442900-01)
Sequence	MGYHQPVHGGAAAGAGGSGGGGGGDHLHQHHHPRLHSPRISGGGSMTRRANSFKRGEIEL QIGSPRSPRGDGVGSPLAESSSASEASAGGGGAVHHHHHQSQQQQLRFRLFKRPGSGAGE VVLGLGIRERRRIGNLLFLAFCGVCLLLGVAKIWAGGWFALPGDDKDADLQDLSISFSSD GGYQFDSHFGHVGGKESDRMLMTVGSEDSVPEAPDVWSQPSSGKFRQCIISNSHKKEDSH TNGYILINANGGLNQMRFGICDMVAVAKILKATLVLPSLDHTSFWADDSEFKDLFNWRHF IESLKEDIDIVEMLPPAYKHIEPVAKAPISWSKVNYYRDEILPLLKKHKVIYFTHTDSRL ANNGLPSYIQKLRCRVNYRSLKYSQTIEDLGATLVSRMHQDGSPYLALHLRFEKDMLAFT GCSHSLTSEEEEELRKMRYEVSHWKEKEINGTERRSMGGCPLTPRETSFLLKGLGFTRST RIYLVAGEAFGNGSMQALMDDFPNIYSHSTLATKEELEPFRNHQNMLAGLDYIVALQSDV FLYTYDGNMAKAVQGHRRFENFRKTINPDRMSFVNLIDEYDEGRMSWDDFSSEVKRIHRD GERIGAPYLREPGEFPKLEESFFANPLPGCICEKLNDE

Transcript Sequence

Transcript ID	Os09t0442900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:16477066:16481692:1 gene:Os09g0442900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Axi 1 (Auxin-independent growth promoter)-like protein. (Os09t0442900-01)
Sequence	ACTCGCCTCCTTCCCTTCCGAGACCACGCGCGAACTGCCCCATGACACTCCCTCCTCCTC CTCCTCCTACTTAACTAGGAAATCTTCGCGCGCCAGCTGATCGTATACCACGTACGTACA CATGGGCTACCACCAGCCCGTACACGGCGGCGCCGCGGCCGGTGCCGGCGGGAGTGGCGG CGGTGGCGGCGGCGACCACCTGCATCAGCATCACCACCCGCGGTTGCACAGCCCGCGGAT ATCCGGGGGCGGGTCGATGACCCGGCGTGCCAACTCGTTCAAGCGCGGGGAGATCGAGCT CCAGATCGGCTCGCCGCGCTCGCCCCGCGGCGACGGCGTCGGGAGCCCCCTCGCCGAGTC GTCGTCGGCGTCCGAGGCGTCCGCGGGCGGCGGCGGCGCGGTCCACCACCACCACCACCA GAGCCAGCAGCAGCAGCTCCGGTTCCGCCTCTTCAAGCGGCCGGGGTCCGGCGCCGGGGA GGTCGTGCTCGGGCTGGGGATCCGGGAGAGGAGGCGGATTGGGAACCTGCTGTTCCTCGC GTTCTGCGGCGTGTGCCTGCTCCTCGGCGTCGCCAAGATCTGGGCGGGCGGCTGGTTCGC CCTCCCCGGCGACGACAAGGACGCTGATTTGCAGGATCTCTCAATCTCATTCTCCAGTGA TGGAGGGTATCAATTTGATAGCCACTTTGGACATGTTGGAGGGAAAGAGAGTGACAGGAT GTTGATGACAGTGGGATCAGAAGACAGTGTTCCTGAGGCCCCCGATGTCTGGTCCCAGCC AAGCAGCGGAAAGTTCAGACAATGCATTATTTCGAATTCTCATAAAAAGGAAGATTCTCA CACAAATGGATACATTCTCATTAACGCAAATGGAGGTTTGAATCAAATGCGGTTTGGGAT ATGCGATATGGTTGCTGTTGCTAAGATCCTGAAGGCTACATTGGTTCTACCTTCACTTGA TCATACATCTTTCTGGGCAGATGACAGTGAATTTAAGGACCTTTTCAATTGGAGACACTT CATTGAGTCACTCAAAGAAGACATTGATATTGTTGAAATGCTGCCCCCAGCATACAAGCA TATTGAGCCTGTGGCTAAAGCTCCAATATCTTGGTCAAAGGTGAATTATTATAGAGATGA AATTCTCCCTCTTTTGAAAAAACACAAAGTCATTTACTTTACGCATACAGATTCTCGCCT TGCCAACAATGGTCTTCCTAGTTATATTCAGAAATTAAGATGCCGAGTTAACTATAGGTC TTTGAAGTATTCCCAAACAATTGAAGATCTTGGTGCTACCTTGGTTTCACGGATGCATCA GGATGGAAGCCCATATCTTGCTCTCCATCTAAGGTTTGAGAAGGATATGCTAGCTTTTAC TGGTTGCAGCCATAGCCTGACATCAGAAGAAGAAGAAGAATTGCGTAAAATGCGTTATGA GGTTAGTCATTGGAAAGAGAAAGAAATAAATGGAACTGAGAGAAGAAGTATGGGTGGTTG TCCTTTGACTCCCAGGGAAACTTCGTTTTTACTCAAAGGATTGGGTTTCACACGAAGCAC CAGAATCTACTTGGTTGCAGGTGAAGCTTTTGGCAATGGAAGCATGCAGGCGCTGATGGA TGATTTTCCCAATATATATTCTCATTCTACCCTTGCAACAAAAGAGGAACTTGAGCCCTT TAGAAATCACCAAAATATGCTTGCTGGTCTTGACTACATTGTAGCTCTCCAGAGTGATGT CTTTCTTTACACGTATGATGGTAATATGGCCAAAGCTGTACAAGGTCATAGGCGTTTCGA GAACTTCAGGAAGACGATCAACCCGGATAGGATGAGTTTCGTGAACCTGATAGATGAATA TGATGAAGGAAGGATGTCTTGGGATGACTTCAGCTCAGAAGTGAAACGTATACATAGAGA TGGAGAGCGAATAGGGGCTCCATATCTCAGGGAGCCTGGGGAATTCCCCAAGCTAGAAGA GTCTTTCTTTGCAAATCCGTTGCCGGGCTGTATATGTGAGAAGCTTAATGACGAGTGAAT ATGTATATATTTGACGATTCTTTAACCATCTACGCCACAGGTCAGGAGTTCAGGATATAT AGTGCCCCTCTGCTCCTTGACAGTGGGTCAGCAGCAATATGCACAATTATTTAGTCATGA TCACTTGACCAGTGAATTCGTGCTGATGAGAGTTCAGAGACGAGACACCAATTTTCAGGT TCATCCCACAAAAGTTTGCTGCATGAAGATCATCAGATATTGCAAATACGAAAACCATGT GAGAAGTCTGGCAGCTGCTAATCAATTTTCCAGCAGCCAGAGCATGCCATCTGAGAAGGC TGGAACATCAGAGCAACTGCAATCAGTATACGGAAGGTAAATACCGCGGAGGAGATTACA CTTACGGCTTTGTATTGCCAATTTGCCATATCATAGGTTTTTTGGTGCACATGGTGCTTC CCAATCTTGCTGTTGCTAAGCTGTATTTTGTGTAGACTCAATACAACTGAATTTTGTCAC TTGTATTTTATCTGGATATATTGAATTAAACG