Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0442700-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:16461644:16467575:-1 gene:Os09g0442700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Decrease in DNA Methylation 1a description:Chromatin remodeling factor, Genome-wide DNA methylation (Os09t0442700-01)
Sequence	ATGTCGGAAGTTAGATCCGTCCCTGGGATGAAGGTGGAAGCATCCCCGGCCGCGGCCGCC GCTGCCACCGTGGATTCCCCGACATCCGTTCTGGAGGATGATGAGATTTCTGAATGTAAG AATGGGGATGTCTTGGATACCACCGAGGCGATTAAGCAAGAGGAGGATCATCTCGATGTG CTTATTGAGGAGAAAGTTGATGGTTTTGTGGATGCAAGTTCTTCCCTGAATGTGGAACCT GCGGCTAACAACAGTGATTTGTCACCTCTCACTGTGCCGGTGAAGGAAGAAGGTCAGTTA TTGGAGCCTGTCAAGGAGGAAAAAGCTGATGATTTTGTGGATGCAGTTCCATCTCTACCG ATTGACCTTGAGGCCAAGAATGGTGATGCATCCCTCATCACTGATGCGATGAAGGAGGAG GAAGAGAAGTTGCACGACGCCCGGGTTAAGGCTGAAGAAGAAGAGGTAGCACGGAAGAGG GAAGAGGCTGCAAGACTTGCTTTTGATCCAAATGCACGTTTTAACAAGTTGGACGAGCTA CTATCACAGACACAACTCTATTCAGAATTTCTACTTGAGAAGATGGAAACGATCGCTGAT GTGGAGGGCGTCCAAACTCATGCTGAAGAGGAGCCAGTAGAAGAGAAGAAGAATGGGCGT GGCAGAAAGAGGAAAGCTACTTCTGCACCAAAGTACAATGATAAAAAAGCCAAGAAAGCA GTGGCAGTCATGCTTACAAGATCTCATGAAGATTGCTCACCTGAGGATTGTACTCTCACA GAAGAAGAAAGGTGGGAAAAAGAGCAAGCCAGACTTGTTCCTCTAATGACTGGCGGGAAG TTGAAGTCCTACCAGATAAAGGGTGTTAAGTGGTTAATATCACTTTGGCAGAATGGGCTT AATGGGATATTGGCTGATCAAATGGGCCTTGGGAAAACAATACAGACTATCGGTTTTCTT GCCCATCTCAAGGGGAAGGGTCTTGATGGTCCATACCTGATAATTGCTCCCCTATCCACT CTCTCAAACTGGGTGAACGAGATCTCAAGGTTTGTTCCATCTATGACTGGTCTGATTTAT CATGGGGACAAAGCAGCCCGGGCAGAGATAAGGAGAAAATTCATGCCCAAAACCACTGGC CCAGATTTTCCATTAATCGTAACTTCCTATGAGATGGCTATGTCAGATGCAAAGCATCTT GCTCACTATAAGTGGAAGTATGTTATTGTGGATGAGGGGCATCGGCTAAAGAATTCCAAG TGTTTATTATTAAGGGAGCTAAAGCGCCTGCCAATGGATAATAAGCTCCTTTTGACTGGA ACTCCTCTTCAGAATAATCTAGCAGAACTGTGGTCCCTGCTGAACTTCATTTTGCCTGAT ATATTCTCTTCACACCAAGAATTTGAGTCATGGTTTGACTTTTCTGCGAAAGGAGGTGAA GAAGAACAAGAGGATAGTGAAGAGAAGAGAAAAGTCGATGTTGTTTCAAAGCTTCATGCC ATATTGCGCCCGTTCCTTCTAAGGCGGATGAAGGAGGATGTAGAGCATATGCTTCCACGA AAGAAAGAGATAATCATTTACGCTAACATGACTGACCATCAGAAACAAATCCAGAATCAC TTGGTTGAACAAACATTTGATCAATACCTGCATGAAAAATCAGAAATTGTTCTGCGGAAA CCTGGCATTAAGGCAAAGCTAAATAATCTGTTAATTCAGTTGAGGAAAAATTGCAACCAT CCTGATCTTCTGGAGTCTGCGTATGACTCATCAGGTCTGTATCCACCTGTTGAGAAGCTC TTGGAACAGTGCGGCAAATTTCAGCTCTTGAACAGATTGCTAAGTTTGCTGCTTGCACGG AAGCACAAGGTTCTAATATTTTCACAGTGGACAAAAGTTTTGGACATTATCGAGTACTAC TTGGAAACAAAAGGCCTTCAGGTTTGCCGAATTGATGGGAGTGTTAAGTTGGAAGAGAGG AGGAGGCAGATAGCAGAATTTAATGACTTGAACAGCAGCATGAATATCTTTATTCTAAGC ACACGGGCTGGCGGGCTTGGTATCAATCTTACTTCAGCGGATACCTGTATCCTATATGAT AGTGACTGGAATCCTCAGATGGATTTGCAGGCCATGGATCGATGTCACCGGATTGGTCAA ACACGCCCAGTTCACGTCTATCGGTTAGCAACATCACATTCTGTTGAGGGCCGGATCATC AAGAAAGCATTTGGCAAGTTGAGGTTGGAGCATGTGGTGATCGGGAAGGGTCAGTTTGAA CAAGACAGAGCCAAGCCTAATGCCCTAGATGAAGCGGAGTTGCTGGCGCTGCTCAGGGAC GAGCAGGGCGACGAGGACCGGATGATCCAGACGGACATCAGCGATGAGGACCTCCTGAAG GTGATGGACCGGAGCGACCTTACAGGCCCTCCTGCCAATGCCGACGCCGCCCCTCTCGTC CCCCTGAAGGGACCCGGCTGGGAGGTGGTGGTGCCGACGAAGAGCGGCGGCGGAATGCTG ACGTCGCTCACCAGTTAG

Peptide Sequence

PEP ID	Os09t0442700-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:16461644:16467575:-1 gene:Os09g0442700 transcript:Os09t0442700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Decrease in DNA Methylation 1a description:Chromatin remodeling factor, Genome-wide DNA methylation (Os09t0442700-01)
Sequence	MSEVRSVPGMKVEASPAAAAAATVDSPTSVLEDDEISECKNGDVLDTTEAIKQEEDHLDV LIEEKVDGFVDASSSLNVEPAANNSDLSPLTVPVKEEGQLLEPVKEEKADDFVDAVPSLP IDLEAKNGDASLITDAMKEEEEKLHDARVKAEEEEVARKREEAARLAFDPNARFNKLDEL LSQTQLYSEFLLEKMETIADVEGVQTHAEEEPVEEKKNGRGRKRKATSAPKYNDKKAKKA VAVMLTRSHEDCSPEDCTLTEEERWEKEQARLVPLMTGGKLKSYQIKGVKWLISLWQNGL NGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLIIAPLSTLSNWVNEISRFVPSMTGLIY HGDKAARAEIRRKFMPKTTGPDFPLIVTSYEMAMSDAKHLAHYKWKYVIVDEGHRLKNSK CLLLRELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESWFDFSAKGGE EEQEDSEEKRKVDVVSKLHAILRPFLLRRMKEDVEHMLPRKKEIIIYANMTDHQKQIQNH LVEQTFDQYLHEKSEIVLRKPGIKAKLNNLLIQLRKNCNHPDLLESAYDSSGLYPPVEKL LEQCGKFQLLNRLLSLLLARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLEER RRQIAEFNDLNSSMNIFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQ TRPVHVYRLATSHSVEGRIIKKAFGKLRLEHVVIGKGQFEQDRAKPNALDEAELLALLRD EQGDEDRMIQTDISDEDLLKVMDRSDLTGPPANADAAPLVPLKGPGWEVVVPTKSGGGML TSLTS

Transcript Sequence

Transcript ID	Os09t0442700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:16461644:16467575:-1 gene:Os09g0442700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Decrease in DNA Methylation 1a description:Chromatin remodeling factor, Genome-wide DNA methylation (Os09t0442700-01)
Sequence	GCCGGCCGCCGATCTCCATCTCCTCGCGAGCAGGGAGCGCGGCAGGGGCGCCGTCGTCCT GCTGCTTCCCGCCACAATCCTGGCTGTTTGGAGGGGCGGTTTAAGAAGGTTCATCTGACC CCCACAATGTCGGAAGTTAGATCCGTCCCTGGGATGAAGGTGGAAGCATCCCCGGCCGCG GCCGCCGCTGCCACCGTGGATTCCCCGACATCCGTTCTGGAGGATGATGAGATTTCTGAA TGTAAGAATGGGGATGTCTTGGATACCACCGAGGCGATTAAGCAAGAGGAGGATCATCTC GATGTGCTTATTGAGGAGAAAGTTGATGGTTTTGTGGATGCAAGTTCTTCCCTGAATGTG GAACCTGCGGCTAACAACAGTGATTTGTCACCTCTCACTGTGCCGGTGAAGGAAGAAGGT CAGTTATTGGAGCCTGTCAAGGAGGAAAAAGCTGATGATTTTGTGGATGCAGTTCCATCT CTACCGATTGACCTTGAGGCCAAGAATGGTGATGCATCCCTCATCACTGATGCGATGAAG GAGGAGGAAGAGAAGTTGCACGACGCCCGGGTTAAGGCTGAAGAAGAAGAGGTAGCACGG AAGAGGGAAGAGGCTGCAAGACTTGCTTTTGATCCAAATGCACGTTTTAACAAGTTGGAC GAGCTACTATCACAGACACAACTCTATTCAGAATTTCTACTTGAGAAGATGGAAACGATC GCTGATGTGGAGGGCGTCCAAACTCATGCTGAAGAGGAGCCAGTAGAAGAGAAGAAGAAT GGGCGTGGCAGAAAGAGGAAAGCTACTTCTGCACCAAAGTACAATGATAAAAAAGCCAAG AAAGCAGTGGCAGTCATGCTTACAAGATCTCATGAAGATTGCTCACCTGAGGATTGTACT CTCACAGAAGAAGAAAGGTGGGAAAAAGAGCAAGCCAGACTTGTTCCTCTAATGACTGGC GGGAAGTTGAAGTCCTACCAGATAAAGGGTGTTAAGTGGTTAATATCACTTTGGCAGAAT GGGCTTAATGGGATATTGGCTGATCAAATGGGCCTTGGGAAAACAATACAGACTATCGGT TTTCTTGCCCATCTCAAGGGGAAGGGTCTTGATGGTCCATACCTGATAATTGCTCCCCTA TCCACTCTCTCAAACTGGGTGAACGAGATCTCAAGGTTTGTTCCATCTATGACTGGTCTG ATTTATCATGGGGACAAAGCAGCCCGGGCAGAGATAAGGAGAAAATTCATGCCCAAAACC ACTGGCCCAGATTTTCCATTAATCGTAACTTCCTATGAGATGGCTATGTCAGATGCAAAG CATCTTGCTCACTATAAGTGGAAGTATGTTATTGTGGATGAGGGGCATCGGCTAAAGAAT TCCAAGTGTTTATTATTAAGGGAGCTAAAGCGCCTGCCAATGGATAATAAGCTCCTTTTG ACTGGAACTCCTCTTCAGAATAATCTAGCAGAACTGTGGTCCCTGCTGAACTTCATTTTG CCTGATATATTCTCTTCACACCAAGAATTTGAGTCATGGTTTGACTTTTCTGCGAAAGGA GGTGAAGAAGAACAAGAGGATAGTGAAGAGAAGAGAAAAGTCGATGTTGTTTCAAAGCTT CATGCCATATTGCGCCCGTTCCTTCTAAGGCGGATGAAGGAGGATGTAGAGCATATGCTT CCACGAAAGAAAGAGATAATCATTTACGCTAACATGACTGACCATCAGAAACAAATCCAG AATCACTTGGTTGAACAAACATTTGATCAATACCTGCATGAAAAATCAGAAATTGTTCTG CGGAAACCTGGCATTAAGGCAAAGCTAAATAATCTGTTAATTCAGTTGAGGAAAAATTGC AACCATCCTGATCTTCTGGAGTCTGCGTATGACTCATCAGGTCTGTATCCACCTGTTGAG AAGCTCTTGGAACAGTGCGGCAAATTTCAGCTCTTGAACAGATTGCTAAGTTTGCTGCTT GCACGGAAGCACAAGGTTCTAATATTTTCACAGTGGACAAAAGTTTTGGACATTATCGAG TACTACTTGGAAACAAAAGGCCTTCAGGTTTGCCGAATTGATGGGAGTGTTAAGTTGGAA GAGAGGAGGAGGCAGATAGCAGAATTTAATGACTTGAACAGCAGCATGAATATCTTTATT CTAAGCACACGGGCTGGCGGGCTTGGTATCAATCTTACTTCAGCGGATACCTGTATCCTA TATGATAGTGACTGGAATCCTCAGATGGATTTGCAGGCCATGGATCGATGTCACCGGATT GGTCAAACACGCCCAGTTCACGTCTATCGGTTAGCAACATCACATTCTGTTGAGGGCCGG ATCATCAAGAAAGCATTTGGCAAGTTGAGGTTGGAGCATGTGGTGATCGGGAAGGGTCAG TTTGAACAAGACAGAGCCAAGCCTAATGCCCTAGATGAAGCGGAGTTGCTGGCGCTGCTC AGGGACGAGCAGGGCGACGAGGACCGGATGATCCAGACGGACATCAGCGATGAGGACCTC CTGAAGGTGATGGACCGGAGCGACCTTACAGGCCCTCCTGCCAATGCCGACGCCGCCCCT CTCGTCCCCCTGAAGGGACCCGGCTGGGAGGTGGTGGTGCCGACGAAGAGCGGCGGCGGA ATGCTGACGTCGCTCACCAGTTAGCTTCTTCATTCGCTCGCTGTTGCCGTCTATGCATGC CGACCGGGTGGGGTGCCTACTTCACCTGTGCTGATGAGACGATGCTTTTGTGATATACAA TATCCCCCAAGTAATTGACTGACTGGGCGTTGCACTTGCACCTACTGACTAGGAGTAGGA GGTGATGTAGTAGTGTGCACTGTTATAGGCTCAGCTGCTGGAATTCATTTTGCAAGGCCA GAAGCCTTTTCCAGCAAGCCGTGCAAGGAAGTGGTTTTTGTCATGATACAATTGTCTACC CAGCTTATGTGTAAGCAAGCTATGCAATGCAATGCTATAAATAGTTTCTCAAGGT