Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0442400-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:16444342:16447967:1 gene:Os09g0442400 gene_biotype:protein_coding transcript_biotype:protein_coding description:t-snare domain containing protein. (Os09t0442400-01)
Sequence	ATGAGGAGACACGCAGGGACGATTATCCTGTTGTTGATCTTGGCCTGCCTATGGCTGTGC CCTGGGAGGAGCAGCGGCTTCTCGTGGAACATTTTCTCCTCGTCGTCGTCGTCTTCGCCG CCGACGGCCGGCGAGAGCCGCGCCGCCCCGATGCTGGAGCTGGACGGCGCGGTGGCCGAC TTCTTGATGGACGGGGCCGACGACCCGAGGGCGGTGAAGCTGCTGGAGAACGCGAGGAGC AAGCTCGCCGGGCCGAGCAACTGCTGGCAGGAGGCGTACCGGAGGCTGTTCGCCAGCTGC GGCGACATCATGGCCGACAAGGAGATGCAGTCGCGGCTGGCGTGGCACCTCAGCAGCTGC TTCCAGGAGGACTCCGGCCGCCCCCCGTTCCCTCGCTGCGGCGAGGTCTCCGACATGGTG CACTGCCGCAAGAGGCTCGGCGTCTCCGAGGACCAGGTGTTCCTCGAGTTCTTCCTCGAG ACCAACACCCTGTGCCACCAATTGCAAGCTGAAGCGTTCAAGCATAACACGGAGAGGCTT GTCAACGACCTGACAAGGACATCCAAGTCAGCCGAGGAGAAGCTGGAGGTGATCGAGGAG AGGTCAGACCAGATCATACAAGAATCACGCAAAGTTCAGGAGACGATCTCGTCGATCGAA ATGCAGGCAGATCATCTCGCAGAGGCGTCGAAGAATGTCGGAGACCAGATCGACGACGTG CTGGCTCACTCCAAGGCCATCTTTGAGCAGTCCAAGGAGATTGCAGACTCTCAGGCAAAG CTCAGAGAAGGGCAGACCGAGATGAGGGAGACGATCGATGCCGGCATGACGCATATTCAG GAGTCGTATGAGAGCCTTGGCAATGGGATGGATAAGCTGAAGGAAGAGGCTGTTGATATT CAGAGGGAGATCAAAACTGTTGGTGATTCCATGTCCACCAAGATGCAGGATTTGCAGAGC ACTGCAAATGATATTGGGAGTGTGGCTGGCAAATCATTGGAGAATCAGATGCAACTTTTG GATGGACAGAGCAAGGCCATGGACGGTCTGAATAATCTGTACAGCTTTCAGGCACAAGCT CTTGAGGAAAGCAGGGAGACTGTGCAAAAACTTGCACAGTTTGGCCAGCGTCAGCAGGAA GAGTTATTGTCCAGGCAGGAAGAAATCCGGCAAGCTCATGAACACCTGATTCATAATTCA CACTCAATACTGGAAGCTCAGGAAGAGTTCAGAGCAAAGCAGGCCAACATTTTTGCTGCT CTGGACAAACTTTACATCCTCCACAACGCCATCTTAGCCGAGTCACGTTTCATCAAGGCG TTCTTCTTCTACTGCTGCATCGTGTTTCTCATCTACATGCTCACAAGCGCGAAGCAAACT TTCAGCATCAGGGGACATCTTTACTTTGGCTTGTGCATCACGCTTCTGCTCGAAATTGGC CTGATCAAGCTCGGAGCTGACGACATCGACAAGCAATTCTGGGTCATATCCAAGGTGTTC CTTGTCAGATCAGTGTTCCTTGCACTTGCCACCGTTCAGATGTTGCATGCCATATTCACA TTCAGGGATTACGAACTACTCAACCATCACCTGCTCCAGACGCTGGTCGAGAAGGTCCGG GCGCTGGAGGAAACCGCCGCCGCCGGCGAGAAGATGCTGCCCTACGGCGGCGGCGGCGCG GAGAGCGAGAGGAGCCTGATGGACTACTCGTGGGTGTTCGACGAGTTGGCCGACGAGGTG GACAGCAATGCGGATCCGAGCTACGCCTTGCCGGGGGATGAGCAGCGGCAGGTGGCGGTG GTCGCTCCTCGCCGGAGGCACTGCGCCTCGCCGGAGGAGGTCGTCGGCGAGAACTCCATC ACGACGTCGGCTGGCCGGAGGTACAACCTGCGGCCACGGAGTAGTTACAGGCAGACGTGA

Peptide Sequence

PEP ID	Os09t0442400-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:16444342:16447967:1 gene:Os09g0442400 transcript:Os09t0442400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:t-snare domain containing protein. (Os09t0442400-01)
Sequence	MRRHAGTIILLLILACLWLCPGRSSGFSWNIFSSSSSSSPPTAGESRAAPMLELDGAVAD FLMDGADDPRAVKLLENARSKLAGPSNCWQEAYRRLFASCGDIMADKEMQSRLAWHLSSC FQEDSGRPPFPRCGEVSDMVHCRKRLGVSEDQVFLEFFLETNTLCHQLQAEAFKHNTERL VNDLTRTSKSAEEKLEVIEERSDQIIQESRKVQETISSIEMQADHLAEASKNVGDQIDDV LAHSKAIFEQSKEIADSQAKLREGQTEMRETIDAGMTHIQESYESLGNGMDKLKEEAVDI QREIKTVGDSMSTKMQDLQSTANDIGSVAGKSLENQMQLLDGQSKAMDGLNNLYSFQAQA LEESRETVQKLAQFGQRQQEELLSRQEEIRQAHEHLIHNSHSILEAQEEFRAKQANIFAA LDKLYILHNAILAESRFIKAFFFYCCIVFLIYMLTSAKQTFSIRGHLYFGLCITLLLEIG LIKLGADDIDKQFWVISKVFLVRSVFLALATVQMLHAIFTFRDYELLNHHLLQTLVEKVR ALEETAAAGEKMLPYGGGGAESERSLMDYSWVFDELADEVDSNADPSYALPGDEQRQVAV VAPRRRHCASPEEVVGENSITTSAGRRYNLRPRSSYRQT

Transcript Sequence

Transcript ID	Os09t0442400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:16444342:16447967:1 gene:Os09g0442400 gene_biotype:protein_coding transcript_biotype:protein_coding description:t-snare domain containing protein. (Os09t0442400-01)
Sequence	TTCGCCTCCCGTCGCGCTCCGTCGCCTTCAACCTCTGCCAACGTCAGGCGATCCGGCTCA TCTGGATCTCTCTGGCTTGCCGGCTAAGGAACACCGGGTGCTATTTATCAGGGAGCCCTT CACACCGCAGGGGAAAGTTGCAGCTATTTTGTCACTGCCCCTTGTTGCATCTTGCTCCGG CGATTTGATTTAGAATTTTAGGAACTGCAATTAACCCGTGATTTTACTCACCAAGATCGC TTCTTGCCCGGTGCAAAGTTCACCGATTTCACCATGAGGAGACACGCAGGGACGATTATC CTGTTGTTGATCTTGGCCTGCCTATGGCTGTGCCCTGGGAGGAGCAGCGGCTTCTCGTGG AACATTTTCTCCTCGTCGTCGTCGTCTTCGCCGCCGACGGCCGGCGAGAGCCGCGCCGCC CCGATGCTGGAGCTGGACGGCGCGGTGGCCGACTTCTTGATGGACGGGGCCGACGACCCG AGGGCGGTGAAGCTGCTGGAGAACGCGAGGAGCAAGCTCGCCGGGCCGAGCAACTGCTGG CAGGAGGCGTACCGGAGGCTGTTCGCCAGCTGCGGCGACATCATGGCCGACAAGGAGATG CAGTCGCGGCTGGCGTGGCACCTCAGCAGCTGCTTCCAGGAGGACTCCGGCCGCCCCCCG TTCCCTCGCTGCGGCGAGGTCTCCGACATGGTGCACTGCCGCAAGAGGCTCGGCGTCTCC GAGGACCAGGTGTTCCTCGAGTTCTTCCTCGAGACCAACACCCTGTGCCACCAATTGCAA GCTGAAGCGTTCAAGCATAACACGGAGAGGCTTGTCAACGACCTGACAAGGACATCCAAG TCAGCCGAGGAGAAGCTGGAGGTGATCGAGGAGAGGTCAGACCAGATCATACAAGAATCA CGCAAAGTTCAGGAGACGATCTCGTCGATCGAAATGCAGGCAGATCATCTCGCAGAGGCG TCGAAGAATGTCGGAGACCAGATCGACGACGTGCTGGCTCACTCCAAGGCCATCTTTGAG CAGTCCAAGGAGATTGCAGACTCTCAGGCAAAGCTCAGAGAAGGGCAGACCGAGATGAGG GAGACGATCGATGCCGGCATGACGCATATTCAGGAGTCGTATGAGAGCCTTGGCAATGGG ATGGATAAGCTGAAGGAAGAGGCTGTTGATATTCAGAGGGAGATCAAAACTGTTGGTGAT TCCATGTCCACCAAGATGCAGGATTTGCAGAGCACTGCAAATGATATTGGGAGTGTGGCT GGCAAATCATTGGAGAATCAGATGCAACTTTTGGATGGACAGAGCAAGGCCATGGACGGT CTGAATAATCTGTACAGCTTTCAGGCACAAGCTCTTGAGGAAAGCAGGGAGACTGTGCAA AAACTTGCACAGTTTGGCCAGCGTCAGCAGGAAGAGTTATTGTCCAGGCAGGAAGAAATC CGGCAAGCTCATGAACACCTGATTCATAATTCACACTCAATACTGGAAGCTCAGGAAGAG TTCAGAGCAAAGCAGGCCAACATTTTTGCTGCTCTGGACAAACTTTACATCCTCCACAAC GCCATCTTAGCCGAGTCACGTTTCATCAAGGCGTTCTTCTTCTACTGCTGCATCGTGTTT CTCATCTACATGCTCACAAGCGCGAAGCAAACTTTCAGCATCAGGGGACATCTTTACTTT GGCTTGTGCATCACGCTTCTGCTCGAAATTGGCCTGATCAAGCTCGGAGCTGACGACATC GACAAGCAATTCTGGGTCATATCCAAGGTGTTCCTTGTCAGATCAGTGTTCCTTGCACTT GCCACCGTTCAGATGTTGCATGCCATATTCACATTCAGGGATTACGAACTACTCAACCAT CACCTGCTCCAGACGCTGGTCGAGAAGGTCCGGGCGCTGGAGGAAACCGCCGCCGCCGGC GAGAAGATGCTGCCCTACGGCGGCGGCGGCGCGGAGAGCGAGAGGAGCCTGATGGACTAC TCGTGGGTGTTCGACGAGTTGGCCGACGAGGTGGACAGCAATGCGGATCCGAGCTACGCC TTGCCGGGGGATGAGCAGCGGCAGGTGGCGGTGGTCGCTCCTCGCCGGAGGCACTGCGCC TCGCCGGAGGAGGTCGTCGGCGAGAACTCCATCACGACGTCGGCTGGCCGGAGGTACAAC CTGCGGCCACGGAGTAGTTACAGGCAGACGTGAGTTTGGTTGGAGAATTAACTGGAGATC GCTTTGTGCGCGTAATACTGTGAACGTTGTTGTTTCTGGGTTTCCAGTGTGAGTTTGGTT TGGGAGAGGTAAAGTCGTCGTGTACCGT