Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0440200-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:16327061:16329922:1 gene:Os09g0440200 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain containing protein. (Os09t0440200-01);Similar to predicted protein. (Os09t0440200-02)
Sequence	CAGGAAAAAACATTTTCAGACACGACCGAAAAGCATCGGCTTCAGACATCTAGAAAAGAA CATGACCATGATGAATTTCTCTTTACAAACGACTCGATCTACATTGACCCTGGGATATCT GGTGAAATGAGGAAGAAGGTATCTGATGCTGCTACTAGAGAAGGTGCAAAATTGTTGGAC CACTGGTTTATTGGCTGTCATGCGACATATGTTGTGTGTGAGGACGCTTCTGTCAAGAGA TATGTTGGTCATTCAGACAACATTGTAACTCCACTTTGGATATTGAAAACCGCAAAGGAA AAAGGTTTGCAGCGTCTTGTCCATTTGTCTTCGGACCTGGCTAGGCAGGTTGCCACGATT CTTGAAAATGCCCAGACATTTCAAGAGAATAGAAAAATTGGGGATGTTCCTTCTGTCAAT TCAAACTCCAGTGGAGTACCATCAACCCAAGGGGAGATAGATGAAATTCATCAAGAGAGG CAAAAATTTGTTGAAGTAGCAAAGAAAAATGTCCGAGATCGCCGTGCTCGCCGTATGCAG TCATGTGAAGTACCAATCCATCCAATCACGCCTGTGAAACTTATGGAATCAATCTGTTGG ACCGTATCTGAGCCAACTACGTCCGCATGCATTTATACGGAGTTTTCATGGTCAGACGAT GCCTTTGAGCAACAAAGCACTACTTTCTTCGATGCGAATGGGGATGGCAAGGATGATCAG TCAAGCGATAGTTTCACCCGCCCACTAAGAGAAAGTGAGAAGAGTGAAGTGATCTTTAAG AACCACTTCCTTACCGTACTCTTCCCCATTGATCGTTTTGGTGAGCTTGGACCTTCCTCA AGGACATTCTTCAGCAATGGTGGTTTCACACGCATACAAGTGCTTGATCACATCTACAAC TTCTACCAGGAAAATATGTCTTCCGATGAGATAAATGTAGCCCTGCAAACGGATTCACGA CATGCTGATCGACTTCGCTCGCTGTACGCAAGTACTGAATCAGCAGAAAGAGGTTTTGTA ACATTCAAAAGAATTGATTTTTTGGGAAGCCGAAGAAGTTTTGAGGGGCTAAAACGCCTC AGCAGAGAGAACAATAGCAATGTATATGAGCTTGTGATTAGGGCATAA

Peptide Sequence

PEP ID	Os09t0440200-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:16327061:16329922:1 gene:Os09g0440200 transcript:Os09t0440200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain containing protein. (Os09t0440200-01);Similar to predicted protein. (Os09t0440200-02)
Sequence	QEKTFSDTTEKHRLQTSRKEHDHDEFLFTNDSIYIDPGISGEMRKKVSDAATREGAKLLD HWFIGCHATYVVCEDASVKRYVGHSDNIVTPLWILKTAKEKGLQRLVHLSSDLARQVATI LENAQTFQENRKIGDVPSVNSNSSGVPSTQGEIDEIHQERQKFVEVAKKNVRDRRARRMQ SCEVPIHPITPVKLMESICWTVSEPTTSACIYTEFSWSDDAFEQQSTTFFDANGDGKDDQ SSDSFTRPLRESEKSEVIFKNHFLTVLFPIDRFGELGPSSRTFFSNGGFTRIQVLDHIYN FYQENMSSDEINVALQTDSRHADRLRSLYASTESAERGFVTFKRIDFLGSRRSFEGLKRL SRENNSNVYELVIRA

Transcript Sequence

Transcript ID	Os09t0440200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:16327061:16329922:1 gene:Os09g0440200 gene_biotype:protein_coding transcript_biotype:protein_coding description:BRCT domain containing protein. (Os09t0440200-01);Similar to predicted protein. (Os09t0440200-02)
Sequence	TCAGGAAAAAACATTTTCAGACACGACCGAAAAGCATCGGCTTCAGACATCTAGAAAAGA ACATGACCATGATGAATTTCTCTTTACAAACGACTCGATCTACATTGACCCTGGGATATC TGGTGAAATGAGGAAGAAGGTATCTGATGCTGCTACTAGAGAAGGTGCAAAATTGTTGGA CCACTGGTTTATTGGCTGTCATGCGACATATGTTGTGTGTGAGGACGCTTCTGTCAAGAG ATATGTTGGTCATTCAGACAACATTGTAACTCCACTTTGGATATTGAAAACCGCAAAGGA AAAAGGTTTGCAGCGTCTTGTCCATTTGTCTTCGGACCTGGCTAGGCAGGTTGCCACGAT TCTTGAAAATGCCCAGACATTTCAAGAGAATAGAAAAATTGGGGATGTTCCTTCTGTCAA TTCAAACTCCAGTGGAGTACCATCAACCCAAGGGGAGATAGATGAAATTCATCAAGAGAG GCAAAAATTTGTTGAAGTAGCAAAGAAAAATGTCCGAGATCGCCGTGCTCGCCGTATGCA GTCATGTGAAGTACCAATCCATCCAATCACGCCTGTGAAACTTATGGAATCAATCTGTTG GACCGTATCTGAGCCAACTACGTCCGCATGCATTTATACGGAGTTTTCATGGTCAGACGA TGCCTTTGAGCAACAAAGCACTACTTTCTTCGATGCGAATGGGGATGGCAAGGATGATCA GTCAAGCGATAGTTTCACCCGCCCACTAAGAGAAAGTGAGAAGAGTGAAGTGATCTTTAA GAACCACTTCCTTACCGTACTCTTCCCCATTGATCGTTTTGGTGAGCTTGGACCTTCCTC AAGGACATTCTTCAGCAATGGTGGTTTCACACGCATACAAGTGCTTGATCACATCTACAA CTTCTACCAGGAAAATATGTCTTCCGATGAGATAAATGTAGCCCTGCAAACGGATTCACG ACATGCTGATCGACTTCGCTCGCTGTACGCAAGTACTGAATCAGCAGAAAGAGGTTTTGT AACATTCAAAAGAATTGATTTTTTGGGAAGCCGAAGAAGTTTTGAGGGGCTAAAACGCCT CAGCAGAGAGAACAATAGCAATGTATATGAGCTTGTGATTAGGGCATAAACTGCACCATA CTCGGTGTTATTTAGTCAAATTTGTTTGTTGTTTACAGGTTGATAGTGATGTACTACCAT GTATGCACGCCGAATAAAATTGTAGGAGATAATGATATATTTATAGATCAATGAAAAAGA TCATGTTGGGCAGTTCAGCCGC