Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0439700-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:16300797:16304815:-1 gene:Os09g0439700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane receptor, eukaryota domain containing protein. (Os09t0439700-01);Transmembrane receptor, eukaryota domain containing protein. (Os09t0439700-02);Hypothetical conserved gene. (Os09t0439700-03)
Sequence

ATGGCGGCCGTGTCGGCGGCGGCCGCCCGCCTGCACCACCTCCTGAGCCTCTGCGTGGCC
GTCGCTGGGCTGCTGCTGATGCTGCTCGGCGGCGGGGAGGCGTCGGTGCACGAGTACCGC
GGGCTCGGCTTCCTCAACAAGGGCAATGCGTTCATCCTCCACGCCGGCAGCGAGGGCCTC
TACGCGCCGTCCTCCCCCGCGAATGCGACGACCGCGGAGGACGACGAGGATGCCGCCGCC
GCCGCCGTGGCCGACGCCTTCATCCGATTTGACAAGATTACGTTTAGGAGACCAAAGGAT
GCTGCAAAGGAAACTGGTTCAGCAATGGTTCAGATACTTGTTTTTGAGATAGAAGATCGT
GAGATGATTGGTGGATCAGCATATGGAGGTCAGAAAGCTATTTGTTGTACCTCAGATCTT
GCGAAGTTAGGAGCTTGCACGGAAGGTTCTGTCATCTATCGGCCATCACAGGTGAATCCT
GGCTGGCCACAGTTGCTTTTTTCATCTTTTGATGGAAGTGACACGATTGCAACACTACCT
TCAAGGATCATTCCTATAACAAAAACCGGGATGTACAATATGTACTTCATACACTGTGAT
CCATCACTTGCTGGTCTGGAGATAGAGGGGCAAACCGTATGGAAAAATCCTACTGGGTAT
CTTCCTGGTCGGATGGCACCTCTTAAGAACTTTTTTGGAATTATGTCATTCGCTTTTGTT
GTACTTGGGATTTATTGGTTCTATCAGTACATGAAGTTTTGGCGTGAAGTTCTGCCACTG
CAAAACTGTATTACTCTTGTCATTACATTGGGCATGCTTGAGATGTCATTGTGGTATTTT
GAGTATGCTGAGTTCAACGAGACTGGTGTTCGACCAAAGGGCATCACATTTTGGGCTGTA
ACATTTGGGACTGTTAAAAGAACAGTAGCCCGTGTTATTATTCTCATTGTCTCAATGGGA
TATGGAGTTGTCAGGCCTAGTTTGGGTGGTCTCACATCAAAGGTGGTTATGCTTGGAGGA
ACATTCTTTTTAGCTACGGAAATCCTTGAATTGGTAGAAAATCTTGGTGCCGTAAATGAT
CTATCTGGAAAAGCTCGATTGTTCTTGGTTTATCCCGTGGCTATTTTGGATGCTGCATTC
GTTGTTTGGATTTTTATTTCGCTAGCTAAGACCCTTGACAAACTTCAGGCCAGAAGGTCA
ATGGCCAAACTTGACATTTACAGGAAATTCACAATAGCATTGGCTGTAACTGTTCTGGTG
TCTATTGGCTGGATTGGCTATGAGATTTACTTCAAATCAACAGATGTATTCAATGAACGA
TGGCAGTATGCATGGATAATTCCTGCGTTCTGGCATGTCTTGTCTTTCTCACTTCTTTGT
GTCATTTCATACCTGTGGGCGCCGTCACAGAACTCAATGAGGTTTACCTATGATGCAAGC
GAAAACTTTGATCGAGAGGACAGTCTGTCACTAATAAGGCCAGGTCCCATTGCTTCCAAG
AACGGGTGGAGTTTATCTTCTTCACCAGACACCAAAGCAACAAAGAACGTTACAGTTACA
TCTTTTGATGGAGATGACGAAGAAAACAAAAGGGAGTAG

Peptide Sequence

PEP ID

Os09t0439700-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:16300797:16304815:-1 gene:Os09g0439700 transcript:Os09t0439700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane receptor, eukaryota domain containing protein. (Os09t0439700-01);Transmembrane receptor, eukaryota domain containing protein. (Os09t0439700-02);Hypothetical conserved gene. (Os09t0439700-03)
Sequence

MAAVSAAAARLHHLLSLCVAVAGLLLMLLGGGEASVHEYRGLGFLNKGNAFILHAGSEGL
YAPSSPANATTAEDDEDAAAAAVADAFIRFDKITFRRPKDAAKETGSAMVQILVFEIEDR
EMIGGSAYGGQKAICCTSDLAKLGACTEGSVIYRPSQVNPGWPQLLFSSFDGSDTIATLP
SRIIPITKTGMYNMYFIHCDPSLAGLEIEGQTVWKNPTGYLPGRMAPLKNFFGIMSFAFV
VLGIYWFYQYMKFWREVLPLQNCITLVITLGMLEMSLWYFEYAEFNETGVRPKGITFWAV
TFGTVKRTVARVIILIVSMGYGVVRPSLGGLTSKVVMLGGTFFLATEILELVENLGAVND
LSGKARLFLVYPVAILDAAFVVWIFISLAKTLDKLQARRSMAKLDIYRKFTIALAVTVLV
SIGWIGYEIYFKSTDVFNERWQYAWIIPAFWHVLSFSLLCVISYLWAPSQNSMRFTYDAS
ENFDREDSLSLIRPGPIASKNGWSLSSSPDTKATKNVTVTSFDGDDEENKRE

Transcript Sequence

Transcript ID

Os09t0439700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:16300797:16304815:-1 gene:Os09g0439700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transmembrane receptor, eukaryota domain containing protein. (Os09t0439700-01);Transmembrane receptor, eukaryota domain containing protein. (Os09t0439700-02);Hypothetical conserved gene. (Os09t0439700-03)
Sequence

ACGCTCAGATCCAGCCTCGCTTCGCTGCCCCCCACCTCCATGGCGGCCGTGTCGGCGGCG
GCCGCCCGCCTGCACCACCTCCTGAGCCTCTGCGTGGCCGTCGCTGGGCTGCTGCTGATG
CTGCTCGGCGGCGGGGAGGCGTCGGTGCACGAGTACCGCGGGCTCGGCTTCCTCAACAAG
GGCAATGCGTTCATCCTCCACGCCGGCAGCGAGGGCCTCTACGCGCCGTCCTCCCCCGCG
AATGCGACGACCGCGGAGGACGACGAGGATGCCGCCGCCGCCGCCGTGGCCGACGCCTTC
ATCCGATTTGACAAGATTACGTTTAGGAGACCAAAGGATGCTGCAAAGGAAACTGGTTCA
GCAATGGTTCAGATACTTGTTTTTGAGATAGAAGATCGTGAGATGATTGGTGGATCAGCA
TATGGAGGTCAGAAAGCTATTTGTTGTACCTCAGATCTTGCGAAGTTAGGAGCTTGCACG
GAAGGTTCTGTCATCTATCGGCCATCACAGGTGAATCCTGGCTGGCCACAGTTGCTTTTT
TCATCTTTTGATGGAAGTGACACGATTGCAACACTACCTTCAAGGATCATTCCTATAACA
AAAACCGGGATGTACAATATGTACTTCATACACTGTGATCCATCACTTGCTGGTCTGGAG
ATAGAGGGGCAAACCGTATGGAAAAATCCTACTGGGTATCTTCCTGGTCGGATGGCACCT
CTTAAGAACTTTTTTGGAATTATGTCATTCGCTTTTGTTGTACTTGGGATTTATTGGTTC
TATCAGTACATGAAGTTTTGGCGTGAAGTTCTGCCACTGCAAAACTGTATTACTCTTGTC
ATTACATTGGGCATGCTTGAGATGTCATTGTGGTATTTTGAGTATGCTGAGTTCAACGAG
ACTGGTGTTCGACCAAAGGGCATCACATTTTGGGCTGTAACATTTGGGACTGTTAAAAGA
ACAGTAGCCCGTGTTATTATTCTCATTGTCTCAATGGGATATGGAGTTGTCAGGCCTAGT
TTGGGTGGTCTCACATCAAAGGTGGTTATGCTTGGAGGAACATTCTTTTTAGCTACGGAA
ATCCTTGAATTGGTAGAAAATCTTGGTGCCGTAAATGATCTATCTGGAAAAGCTCGATTG
TTCTTGGTTTATCCCGTGGCTATTTTGGATGCTGCATTCGTTGTTTGGATTTTTATTTCG
CTAGCTAAGACCCTTGACAAACTTCAGGCCAGAAGGTCAATGGCCAAACTTGACATTTAC
AGGAAATTCACAATAGCATTGGCTGTAACTGTTCTGGTGTCTATTGGCTGGATTGGCTAT
GAGATTTACTTCAAATCAACAGATGTATTCAATGAACGATGGCAGTATGCATGGATAATT
CCTGCGTTCTGGCATGTCTTGTCTTTCTCACTTCTTTGTGTCATTTCATACCTGTGGGCG
CCGTCACAGAACTCAATGAGGTTTACCTATGATGCAAGCGAAAACTTTGATCGAGAGGAC
AGTCTGTCACTAATAAGGCCAGGTCCCATTGCTTCCAAGAACGGGTGGAGTTTATCTTCT
TCACCAGACACCAAAGCAACAAAGAACGTTACAGTTACATCTTTTGATGGAGATGACGAA
GAAAACAAAAGGGAGTAGAAGGGGCACTGTGCATTTCATGAGGGAGAGAAGATACAGCCA
CATTCAAATTTTGGTATGCAGCAGATCACACTTTACTAATTCTAGTTGTCGGGATACGCC
AAGGGAATTATGGAAGTAATCTTTATTGAATTCATTTCCTCCATATAGTAGTTTTTCACA
CGGTGCGCCACGTTATAGGCATCACTGTATGGATGATGATATATATGATAGGAACAATTT
ATCTATGCCATCCAGAGGATGTGTGGTGTATAATGTGTATTTTTGTAGATTTGATGCTGC
TTCTGGTTTATGTGAACTCCAAGATTGTCATGTACGGTAGAAGAGAATGTTGTTTTTCTG
TGTTTTATTTATTTATTCTTGATT