Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0439500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:16287916:16290736:1 gene:Os09g0439500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type II chlorophyll a/b binding protein from photosystem I precursor. (Os09t0439500-01)
Sequence	ATGGCTCTGCCCTCCGGCTCATTCGCGGCATGTAGCATCCAACCAAGGGTGCGGGCGGCG TTGCGCGCGCCGACGCTGCCGTCGCAGAACGCCGCCGTTGCAAGGATGGCCGGCCACCGC GCCGGCGCGACGAAGGGCGGCGTGTCCGCGGTGTGCGAGCCGCTGGGGCCCGACAGGCCG CTCTGGTTCCCCGGCAGCTCCCCTCCTCCGTGGCTCGACGGCAGCCTCCCGGGAGACTTC GGTTTCGATCCTCTTGGATTAGGGTCGGATCCGGAGCTGCTGCGGTGGTTCGCGCAGGCG GAGCTGATGCACAGCCGGTGGGCGATGCTGGCGGTGGCGGGGATCCTGGTCCCGGAGGTG CTGGAGAAATGGGGGTTCATGGAGGACTACTCATGGATCGACGCCGGCGCGCGCGACTAC TTCGCGGACCCGTGGACGCTGTTCGTGTCGCAGATGGCACTGATGGGGTGGGCGGAGGGG CGGCGGTGGGCGGACTACCTCAACCCCGGGTGCGTCGCCGTCGAGCCGCGGCTGCCCAAC CGGAGGAACCCCGTGCCGGACGTCGGCTACCCCGGCGGGCTGTGGTTCGACTGGGGCAAC TGGGGCCGGGGATCGCCGGAGCCCGTCATGGTGCTGCGCACCAAGGAGATCAAGAACGGG AGGCTCGCCATGCTCGCCTTCGTGGGGTTCTGGTTCCAGGCCGTCTACACCGGCGAGGGC CCCATTGATAACCTCCTGCATCACCTCGCCGACCCCGGCCACTGCAACGTCTTCTCGGCA TTCACGTCCCATTGA

Peptide Sequence

PEP ID	Os09t0439500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:16287916:16290736:1 gene:Os09g0439500 transcript:Os09t0439500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type II chlorophyll a/b binding protein from photosystem I precursor. (Os09t0439500-01)
Sequence	MALPSGSFAACSIQPRVRAALRAPTLPSQNAAVARMAGHRAGATKGGVSAVCEPLGPDRP LWFPGSSPPPWLDGSLPGDFGFDPLGLGSDPELLRWFAQAELMHSRWAMLAVAGILVPEV LEKWGFMEDYSWIDAGARDYFADPWTLFVSQMALMGWAEGRRWADYLNPGCVAVEPRLPN RRNPVPDVGYPGGLWFDWGNWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAVYTGEG PIDNLLHHLADPGHCNVFSAFTSH

Transcript Sequence

Transcript ID	Os09t0439500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:16287916:16290736:1 gene:Os09g0439500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Type II chlorophyll a/b binding protein from photosystem I precursor. (Os09t0439500-01)
Sequence	ACTTTTCCCTCCTTCACACTTCACCAGCTTCACTCGCCCTCTCCCTGTTCTCCTCACTCT CCTCCATGGCTCTGCCCTCCGGCTCATTCGCGGCATGTAGCATCCAACCAAGGGTGCGGG CGGCGTTGCGCGCGCCGACGCTGCCGTCGCAGAACGCCGCCGTTGCAAGGATGGCCGGCC ACCGCGCCGGCGCGACGAAGGGCGGCGTGTCCGCGGTGTGCGAGCCGCTGGGGCCCGACA GGCCGCTCTGGTTCCCCGGCAGCTCCCCTCCTCCGTGGCTCGACGGCAGCCTCCCGGGAG ACTTCGGTTTCGATCCTCTTGGATTAGGGTCGGATCCGGAGCTGCTGCGGTGGTTCGCGC AGGCGGAGCTGATGCACAGCCGGTGGGCGATGCTGGCGGTGGCGGGGATCCTGGTCCCGG AGGTGCTGGAGAAATGGGGGTTCATGGAGGACTACTCATGGATCGACGCCGGCGCGCGCG ACTACTTCGCGGACCCGTGGACGCTGTTCGTGTCGCAGATGGCACTGATGGGGTGGGCGG AGGGGCGGCGGTGGGCGGACTACCTCAACCCCGGGTGCGTCGCCGTCGAGCCGCGGCTGC CCAACCGGAGGAACCCCGTGCCGGACGTCGGCTACCCCGGCGGGCTGTGGTTCGACTGGG GCAACTGGGGCCGGGGATCGCCGGAGCCCGTCATGGTGCTGCGCACCAAGGAGATCAAGA ACGGGAGGCTCGCCATGCTCGCCTTCGTGGGGTTCTGGTTCCAGGCCGTCTACACCGGCG AGGGCCCCATTGATAACCTCCTGCATCACCTCGCCGACCCCGGCCACTGCAACGTCTTCT CGGCATTCACGTCCCATTGACGGGATTAGAGTTTGGGACGTTGCAGTCTACAGATGAAAA TGCTAAAAGCGATGTTGC