Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0439200-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:16273522:16275268:-1 gene:Os09g0439200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 10C description:Jasmonate ZIM-domain protein, Jasmonate-induced resistance to bacterial blight, Repressor of jasmonic acid signaling (Os09t0439200-01)
Sequence	ATGGCCGGCCGTGCGACGGCGACGGCGACGGCGGCGGGGAAGGACAGGTCCAGCTTCGCC GTCACCTGTAGCCTCCTCAGCCAGTTTCTCAAGGAGAAGAAGGGCGGCGGCGGCGGGCTG CAGGGGCTCGGCCTCGGCTTGCGGCCGGCGCCGGCGGCGCCGCCCGCCGCGGGAGCTGGA GGTGCTTTCCGGCCGCCGCCGACCACCATGAACTTGCTGTCGGGGCTCGACGCGCCGGCG GTGGAGGTGGAGCCAAACACGGCGGAAACAGCGGCCGACGAGCTGCCTCTCATCAAGGCC CCGGCCGATCAGCAAAGCGACGAAAGTGCAAGTGAGGCAGCTGGAGAGAAGGCTCAACAG CTGACCATCTTCTACGGTGGAAAAGTAGTCGTCTTTGAGAACTTCCCGTCCACCAAGGTC AAGGATCTCTTACAAATCGTAAGCACAGGCGATGGCGTCGACAAGAACACCGGCACCGCG GCAACGCAGAGCCTGCCCCGACCCGCACACAACAGTCTTCCCGATCTGCCGATTGCAAGG AGGAACTCGCTCCATAGGTTTCTCGAGAAGAGAAAGGGCAGGATGAATGCAAATGCTCCA TACCAAGCTAACTGCACCGCTGCACCGTCCAAGCAAGCTAACGGTGACAAATCTTGGCTT GGGTTTGGCCAAGAGATGACAATAAAGCAGGAGATATGA

Peptide Sequence

PEP ID	Os09t0439200-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:16273522:16275268:-1 gene:Os09g0439200 transcript:Os09t0439200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 10C description:Jasmonate ZIM-domain protein, Jasmonate-induced resistance to bacterial blight, Repressor of jasmonic acid signaling (Os09t0439200-01)
Sequence	MAGRATATATAAGKDRSSFAVTCSLLSQFLKEKKGGGGGLQGLGLGLRPAPAAPPAAGAG GAFRPPPTTMNLLSGLDAPAVEVEPNTAETAADELPLIKAPADQQSDESASEAAGEKAQQ LTIFYGGKVVVFENFPSTKVKDLLQIVSTGDGVDKNTGTAATQSLPRPAHNSLPDLPIAR RNSLHRFLEKRKGRMNANAPYQANCTAAPSKQANGDKSWLGFGQEMTIKQEI

Transcript Sequence

Transcript ID	Os09t0439200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:16273522:16275268:-1 gene:Os09g0439200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 10C description:Jasmonate ZIM-domain protein, Jasmonate-induced resistance to bacterial blight, Repressor of jasmonic acid signaling (Os09t0439200-01)
Sequence	AGAGAGAGACAACCAGACGGGAGCTTGTCGGGGAGGAGAGAGAGAGAGAGTGGTGGTGGT GGTGGTGAGATGGCCGGCCGTGCGACGGCGACGGCGACGGCGGCGGGGAAGGACAGGTCC AGCTTCGCCGTCACCTGTAGCCTCCTCAGCCAGTTTCTCAAGGAGAAGAAGGGCGGCGGC GGCGGGCTGCAGGGGCTCGGCCTCGGCTTGCGGCCGGCGCCGGCGGCGCCGCCCGCCGCG GGAGCTGGAGGTGCTTTCCGGCCGCCGCCGACCACCATGAACTTGCTGTCGGGGCTCGAC GCGCCGGCGGTGGAGGTGGAGCCAAACACGGCGGAAACAGCGGCCGACGAGCTGCCTCTC ATCAAGGCCCCGGCCGATCAGCAAAGCGACGAAAGTGCAAGTGAGGCAGCTGGAGAGAAG GCTCAACAGCTGACCATCTTCTACGGTGGAAAAGTAGTCGTCTTTGAGAACTTCCCGTCC ACCAAGGTCAAGGATCTCTTACAAATCGTAAGCACAGGCGATGGCGTCGACAAGAACACC GGCACCGCGGCAACGCAGAGCCTGCCCCGACCCGCACACAACAGTCTTCCCGATCTGCCG ATTGCAAGGAGGAACTCGCTCCATAGGTTTCTCGAGAAGAGAAAGGGCAGGATGAATGCA AATGCTCCATACCAAGCTAACTGCACCGCTGCACCGTCCAAGCAAGCTAACGGTGACAAA TCTTGGCTTGGGTTTGGCCAAGAGATGACAATAAAGCAGGAGATATGATATGACCTCTTA GCTTACAGTTCACTGTCAAGTGTCAAGTGATCTGTGGGGAAGAGATGCGTGGTTGGCTGG TTGCTAGTGCTAGTGTATTCCCCCGTAGCTTCAAAGCATGAATAATTACTCAATACTACT ACATTACTACTAGTAAGAACTTAATCAATACTAGGAATCAAGCTGGTGGTTAATTCTGCC TGACCATTGGCATCCTGGAATATATATAAGCACACACACGGGTTGTTTGTTCTCCACATT GTTTGCTGCTGGAGCCGTATGCTCACTGCAGTTTATATCTGTCTAGCTGGTTACCCACCT CAGCCTCACCATGTTTCGGGAATAAACACTGTGTATGTGCAAATTCTTCATTTCTCGTTC GGTTTCGCCGTATAAATTACATTGTTACTATTTTGGCT