Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0438700-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:16236686:16240793:-1 gene:Os09g0438700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20). (Os09t0438700-01)
Sequence	ATGGCGTCGGTGCAGCTGTCCGCCGGCCCGCGGGTGTCAGTGTCACCGGCGGCGGCGCTG GTGGCGATGCCTTCGGTCGCCGCCGCCGCATCGAGGGGGCGCCGCGGGTACCGGGGGCTC GTCGTGAGGGCCGCCACGGTCGTGTCGCCCAAGTATACTTCTATCAAACCCTTGGGAGAT AGGGTGCTTGTGAAGATCAAGACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCA ACATCAGTTCAGTCAAAACCGCAAGGAGGACAAGTTGTAGCAGTTGGAGAGGGGAGAAGC ATGGGCAGCGACAGCATAGAGATCAGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAA TATGCTGGCACAGAGTTGGAATTCGATGGGTCTGACCATCTCATTTTGAAAGAAGATGAC ATCATTGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGACCGTGTT CTCATTAAGGTTGCAGAGGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCG ACCAAAGAAAAGCCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCATTGGTTGAG GATGGCAGCAGGAAACCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAAGTAC GCGGGAAGCGAGTTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTA ATGGCTGTTCTTTCCTAA

Peptide Sequence

PEP ID	Os09t0438700-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:16236686:16240793:-1 gene:Os09g0438700 transcript:Os09t0438700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20). (Os09t0438700-01)
Sequence	MASVQLSAGPRVSVSPAAALVAMPSVAAAASRGRRGYRGLVVRAATVVSPKYTSIKPLGD RVLVKIKTSDDKTVGGILLPTSVQSKPQGGQVVAVGEGRSMGSDSIEISVPVGAQVVYSK YAGTELEFDGSDHLILKEDDIIGILDTDDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTQA TKEKPSIGTVTAVGPGPLVEDGSRKPLSITPGNTVMYSKYAGSEFKGEDGEYIVLRVSDV MAVLS

Transcript Sequence

Transcript ID	Os09t0438700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:16236686:16240793:-1 gene:Os09g0438700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 20 kDa chaperonin, chloroplast precursor (Protein Cpn21) (Chloroplast protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10) (Chaperonin 20). (Os09t0438700-01)
Sequence	AGCAAGCCAACAACCTCAGTGGAGCTCACCCTTATCCCCCCCAGCTCCAGAACCTTCTCC TCTCTCCTCTCTCGCTCGCTCGCTTCTCGCGGTTGTCGTCGGCGGTAGCGAGCTCATGGC GTCGGTGCAGCTGTCCGCCGGCCCGCGGGTGTCAGTGTCACCGGCGGCGGCGCTGGTGGC GATGCCTTCGGTCGCCGCCGCCGCATCGAGGGGGCGCCGCGGGTACCGGGGGCTCGTCGT GAGGGCCGCCACGGTCGTGTCGCCCAAGTATACTTCTATCAAACCCTTGGGAGATAGGGT GCTTGTGAAGATCAAGACCTCTGATGATAAAACTGTTGGAGGAATATTACTTCCAACATC AGTTCAGTCAAAACCGCAAGGAGGACAAGTTGTAGCAGTTGGAGAGGGGAGAAGCATGGG CAGCGACAGCATAGAGATCAGTGTTCCAGTTGGTGCACAAGTTGTCTACTCTAAATATGC TGGCACAGAGTTGGAATTCGATGGGTCTGACCATCTCATTTTGAAAGAAGATGACATCAT TGGTATTCTCGACACAGATGATGTGAAAGATCTGAAGCCACTGAATGACCGTGTTCTCAT TAAGGTTGCAGAGGCTGAAGAGAAAACTGCAGGTGGTTTGCTATTGACACAAGCGACCAA AGAAAAGCCTTCTATTGGAACAGTGACAGCCGTAGGCCCAGGACCATTGGTTGAGGATGG CAGCAGGAAACCCTTGTCAATCACTCCTGGGAATACCGTGATGTACTCCAAGTACGCGGG AAGCGAGTTTAAGGGTGAAGATGGCGAATATATTGTTCTCAGGGTATCCGACGTAATGGC TGTTCTTTCCTAAGCAGACAACGCTCTTGCGAAATAGGATTTTCTTTAAGAAAACATGTG AAATAGGAATTTTGATATTTAGTCAAAACTTTGTTGCACTGCTCTTGCTTGGAAATGGTG TATCGCTGCTATTCCTACTTGATGTCACTGCAAAATGCAGAGTTCAAT