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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0437500-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:16153181:16155032:1 gene:Os09g0437500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dormancyauxin associated family protein. (Os09t0437500-01)
Sequence

ATGGGGCTCCTCGACCAGCTCTGGGACGACACGGTGGCCGGGCCGCGGCCGGACTCCGGC
CTCGGCAAGCTCCGCAAGTACGCCTCCTTCTCCCCTTCCTCCTCCTCCTCGACGATGGCG
GCGTCGCCGTCGCCCATCTCGGCGGCGGCGGCGGCGGCCGACGCGCCGGCCGTGACGCGC
AGCATCACCATCCTCCGCCCGCCGGCGCTGTCCGTGACGTCGCCGCGCGGCAGCGAGTCG
GGCCCCTCCACGCCGTCGTCGCCGGCCAGCGTCCCGGACTCCCCCTTCGGCTCAGCACCG
ACGCCGAAGGGATCGGAGGGCTGGAAGAAGCTGCGCCGTGGGGCGGCGAGGATGGCCGAC
GGCGTGGACGCCAGCGCCGGCGGCCAGCCGAGAAGCCCCACCGTATACGACTGGGTGGTG
ATCAGCTCACTCGACAGGTGA

Peptide Sequence

PEP ID

Os09t0437500-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:16153181:16155032:1 gene:Os09g0437500 transcript:Os09t0437500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dormancyauxin associated family protein. (Os09t0437500-01)
Sequence

MGLLDQLWDDTVAGPRPDSGLGKLRKYASFSPSSSSSTMAASPSPISAAAAAADAPAVTR
SITILRPPALSVTSPRGSESGPSTPSSPASVPDSPFGSAPTPKGSEGWKKLRRGAARMAD
GVDASAGGQPRSPTVYDWVVISSLDR

Transcript Sequence

Transcript ID

Os09t0437500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:16153181:16155032:1 gene:Os09g0437500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dormancyauxin associated family protein. (Os09t0437500-01)
Sequence

GGAAGGAAAAAAGAGAAGCAACCAGACACTGCACACATCATCATCTTCTCCCCCGAGACC
GGGTGATCTTGGGTTAGCTTAGCTAGCTAAATTAAGCTGCGTGCAGCATGGGGCTCCTCG
ACCAGCTCTGGGACGACACGGTGGCCGGGCCGCGGCCGGACTCCGGCCTCGGCAAGCTCC
GCAAGTACGCCTCCTTCTCCCCTTCCTCCTCCTCCTCGACGATGGCGGCGTCGCCGTCGC
CCATCTCGGCGGCGGCGGCGGCGGCCGACGCGCCGGCCGTGACGCGCAGCATCACCATCC
TCCGCCCGCCGGCGCTGTCCGTGACGTCGCCGCGCGGCAGCGAGTCGGGCCCCTCCACGC
CGTCGTCGCCGGCCAGCGTCCCGGACTCCCCCTTCGGCTCAGCACCGACGCCGAAGGGAT
CGGAGGGCTGGAAGAAGCTGCGCCGTGGGGCGGCGAGGATGGCCGACGGCGTGGACGCCA
GCGCCGGCGGCCAGCCGAGAAGCCCCACCGTATACGACTGGGTGGTGATCAGCTCACTCG
ACAGGTGAAGGCGTGATCTATCTAATCGAGCAGCTAAGCTCTGCATCCGGCGAGAAACTG
CACCTGCACAATATGAAGCAGCTAGAAACTGAAGGCGAGCAAAGAAGAAAAAAAACACTA
AATTCTGCTCTTTTTCAGTTAAGTTTCAGCTCGTCGATCCAGAGCATGAAATGTTCAGTG
TTCAGCTATCTGCACTACTACAGACTGCCGATTTTGTAGCCAAGGATGTATAAACGTATG
CATGCTTGTACTACCACCGTATAATATACGTACGTGTACGTAGTAGATCGATGCAGACAA
AAAGTCTTAGCAGAAGAGGGGATCCTTGTACGTACACAACCTGTAGTGTACGTACACGAT
GCGATCGATGATGAACTGATAGTATATGTATATGGCGCAGCTGGTGTATTATATTACATG
CGCTAGCTGGAGGGAGAGTGTGCTAATGTTGTACTAGTACTACGACTGATCTGTTTGCTT
CTCCTCTGCTTTCTTTGTCTCCAGAAAAGAGGGAGAGGAGAGAAGTTTTTCCCCTGTTTT
TGTGGAATATGTAAAAGATGGCTGCAGTGCATGCAGCAGTGTAAAAGTGTGAAAAGAAGT
GGGCAATAATGCATGGCCAAATAATGTTATGAACCT