Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0436300-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:16039122:16045463:-1 gene:Os09g0436300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase, trypsin-like serine and cysteine domain containing protein. (Os09t0436300-01)
Sequence	ATGCCGAACAAGAAGAAGAGAAGTGCAGAAGATGCTGCTTTGTATGTGGAGAGTTTATTG TTCGGTGATGATCCTAGTGATTCTGAAGCGGATGTCGACAAATATGATGCTAGCGATTTG AAGGGGGCAATAAACAAGGATGGCTCTAGTGATGAAGAGGATTTCACAGAGGAAGGCCTG AGTGCAAAAGAGGTGGCCTTAAGCATATCCAAATCCATCGTGTCCCTTATCTCTTCTGTT GATGGAAAGGTTCTATTTACTTGCTCAGGGACAATGGTTGATCATGTGGGTTCTGCAACT TGGATACTCACCTCTGCTACTCTGGTTAGGAAATGTGACAATGACTATGATGCTTATCAA GAGGGTGATGTTAAGATTGAAGTACTTCTGCACAACAAAACAATCACTGAGGGGTTCTTA GCAATGTGCAGTCTGCAGTACAATATAGCTGTTGTCACCATTGAGCCACAATTTGATCTT CCTTTGGTGAAACTTCATGACGTTCCTGTCTGTTATTCCATGCTGTGTCGGCCTGTGATA GCTGTAGCTCGTAACTTTAAGTCAAAGACTTTACTAGTGAGATGTGGGGAGATGACCCGT GAACGTAGCGAATTGGACTGCGATGAGCTTTTGGTCTGCACTTGTCCTGTTAGTAAGGTT TTCATTGGGGGCCTTGTCATGGATTTGGAAAGGAGGATTCTCGGCATCACTTTTTACGAC AAGGATACTGTTCCATTCTTGCCTATTGAGATTGCGGTGAGATGCTTGGAACACTTCAAG AATTTCAGGACACTCAAACAACCATCTCTTTGCATAAGGGGACAAGCTATTCACAAGTTG GAAATATGCAATTTGGAAAAAATATGCTACATGTATCCTGAGCTGTCTTCTGGTTCTGGA ATTGTGGTAGAGAAGATATCAGAAGTGTTACCAGAAAATTGTAGCAGCATTGAGGCTGGT GATATCATCTGTAGTGTTGATGACATTGTTCTCTACTCTCTGTCTCAGCTTACTTCGATA TTTCTTGATAAAATGGCGGCTGCAATGCCCACGCAGGATAAAGTGACTGTCCAGGCTGAA ATACGAAGGCCCAGAGATAACACTAAGTTTGTTGCAAAGCTGAATATAGGAATTGCTTCT GGTGAACACAACAATTGCTTCAATAACAGATGGCCACTGCAGTGA

Peptide Sequence

PEP ID	Os09t0436300-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:16039122:16045463:-1 gene:Os09g0436300 transcript:Os09t0436300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase, trypsin-like serine and cysteine domain containing protein. (Os09t0436300-01)
Sequence	MPNKKKRSAEDAALYVESLLFGDDPSDSEADVDKYDASDLKGAINKDGSSDEEDFTEEGL SAKEVALSISKSIVSLISSVDGKVLFTCSGTMVDHVGSATWILTSATLVRKCDNDYDAYQ EGDVKIEVLLHNKTITEGFLAMCSLQYNIAVVTIEPQFDLPLVKLHDVPVCYSMLCRPVI AVARNFKSKTLLVRCGEMTRERSELDCDELLVCTCPVSKVFIGGLVMDLERRILGITFYD KDTVPFLPIEIAVRCLEHFKNFRTLKQPSLCIRGQAIHKLEICNLEKICYMYPELSSGSG IVVEKISEVLPENCSSIEAGDIICSVDDIVLYSLSQLTSIFLDKMAAAMPTQDKVTVQAE IRRPRDNTKFVAKLNIGIASGEHNNCFNNRWPLQ

Transcript Sequence

Transcript ID	Os09t0436300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:16039122:16045463:-1 gene:Os09g0436300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase, trypsin-like serine and cysteine domain containing protein. (Os09t0436300-01)
Sequence	CGAGGCAGACTGGACGCGGTCCCGGGCGCTGCTGCCGGCTGCCGCCGCCTCCCCTCGGCG TCTCCTTCCCCCGCGGTTGGCTACCTCAAGGGGCTTCCTCAGCGCGGTCACCTCCCTCCT CGGCGGTGAAGATTGCAGATATTATGCCGAACAAGAAGAAGAGAAGTGCAGAAGATGCTG CTTTGTATGTGGAGAGTTTATTGTTCGGTGATGATCCTAGTGATTCTGAAGCGGATGTCG ACAAATATGATGCTAGCGATTTGAAGGGGGCAATAAACAAGGATGGCTCTAGTGATGAAG AGGATTTCACAGAGGAAGGCCTGAGTGCAAAAGAGGTGGCCTTAAGCATATCCAAATCCA TCGTGTCCCTTATCTCTTCTGTTGATGGAAAGGTTCTATTTACTTGCTCAGGGACAATGG TTGATCATGTGGGTTCTGCAACTTGGATACTCACCTCTGCTACTCTGGTTAGGAAATGTG ACAATGACTATGATGCTTATCAAGAGGGTGATGTTAAGATTGAAGTACTTCTGCACAACA AAACAATCACTGAGGGGTTCTTAGCAATGTGCAGTCTGCAGTACAATATAGCTGTTGTCA CCATTGAGCCACAATTTGATCTTCCTTTGGTGAAACTTCATGACGTTCCTGTCTGTTATT CCATGCTGTGTCGGCCTGTGATAGCTGTAGCTCGTAACTTTAAGTCAAAGACTTTACTAG TGAGATGTGGGGAGATGACCCGTGAACGTAGCGAATTGGACTGCGATGAGCTTTTGGTCT GCACTTGTCCTGTTAGTAAGGTTTTCATTGGGGGCCTTGTCATGGATTTGGAAAGGAGGA TTCTCGGCATCACTTTTTACGACAAGGATACTGTTCCATTCTTGCCTATTGAGATTGCGG TGAGATGCTTGGAACACTTCAAGAATTTCAGGACACTCAAACAACCATCTCTTTGCATAA GGGGACAAGCTATTCACAAGTTGGAAATATGCAATTTGGAAAAAATATGCTACATGTATC CTGAGCTGTCTTCTGGTTCTGGAATTGTGGTAGAGAAGATATCAGAAGTGTTACCAGAAA ATTGTAGCAGCATTGAGGCTGGTGATATCATCTGTAGTGTTGATGACATTGTTCTCTACT CTCTGTCTCAGCTTACTTCGATATTTCTTGATAAAATGGCGGCTGCAATGCCCACGCAGG ATAAAGTGACTGTCCAGGCTGAAATACGAAGGCCCAGAGATAACACTAAGTTTGTTGCAA AGCTGAATATAGGAATTGCTTCTGGTGAACACAACAATTGCTTCAATAACAGATGGCCAC TGCAGTGAAAGAAGCAATATTTTGGTGATAAATATTTGAACTGATGAAGGCTGACCCTTT TTTTTTTTTGGGGAGAGAGAGGGGGGGGGGGGGGGGTTAACATGCAAACCTATCTGCCAT TTGTCTTTGAAGCCTCGGCTTTCCTCCGAATTTCTTAAACCAGAAGTATCCCAATCCAAC ACAACACACATGCACTGTGGCATTAATGGGTAGGATAAAACCTCCTCAGACAGATTGCTT ATGGTTTTAATTTTCAGCTGTGAAGATGAGAACTTTCAAGGGGATTCTTGATCCATTTCA GGCATGTGTTGACATGAAAAGGCCTCTTCACTCCT