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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0431900-00
CDS Infomation

cds chromosome:IRGSP-1.0:9:15829339:15830158:-1 gene:Os09g0431900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os09t0431900-00)
Sequence

ATGCTCACCACTTTCTCGGCTTTCTCCCAGGAGGGTAGAGGAGTAGCAGCTACTAGCGGT
GGTGGTGGTCCTTTCACCGGGTGGTGCTCCTCCCGGCGGCGGCGGCCGGAGGCGCCGGCA
GCCATGGATCGGTACAACGGCGGCGGCGGCGGCGGCGAGGAGGGGGATGAGCAGCTGGAC
CTCAACCTGTCGCTGCAGCCGTCGCAGGCGAACGAGCCGCCGGGGTACTTCACCTGCACC
TACTGCGACAAGAAGTTCTACTCGTCGCAGGCGCTGGGCGGCCACCAGAACGCCCACAAG
TTCGAGCGCAGCGTCGCCAAGCGCACCCGGGAGCTCGCCGCGGCGCGCCGCCAGCAGGCC
GCCGACGAGGAGGCGCGGCGAGGGGCAGGGACCACCACCACCAGGGAGCCCACGGGCAAT
GCCTCGTCGTCGTACCAGAGGGCGTCGCCGCCGGCGGAGGCTCGCCGCCGGGACCTCCTC
ACCGACGACATCGACCTGTCCCTGAAGCTATGA

Peptide Sequence

PEP ID

Os09t0431900-00
PEP Infomation

pep chromosome:IRGSP-1.0:9:15829339:15830158:-1 gene:Os09g0431900 transcript:Os09t0431900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os09t0431900-00)
Sequence

MLTTFSAFSQEGRGVAATSGGGGPFTGWCSSRRRRPEAPAAMDRYNGGGGGGEEGDEQLD
LNLSLQPSQANEPPGYFTCTYCDKKFYSSQALGGHQNAHKFERSVAKRTRELAAARRQQA
ADEEARRGAGTTTTREPTGNASSSYQRASPPAEARRRDLLTDDIDLSLKL

Transcript Sequence

Transcript ID

Os09t0431900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:15829339:15830158:-1 gene:Os09g0431900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os09t0431900-00)
Sequence

TACATGTGTTAATCCCCTCGCCCCCAGCGTTTTTTCCTTAATAAATTAGCGAGCGAGAGA
GCTAGTAATACGTATCCCTCCTCGTGCATCTCTCTCACACACTCTCTCGCACAAACTACA
TCATTTGGGATTTGCTGCAGAAGCAGCAGCTAAGATAGCTAAGCTAAGCTAAGCTAGCCT
CACTCCATGCTCACCACTTTCTCGGCTTTCTCCCAGGAGGGTAGAGGAGTAGCAGCTACT
AGCGGTGGTGGTGGTCCTTTCACCGGGTGGTGCTCCTCCCGGCGGCGGCGGCCGGAGGCG
CCGGCAGCCATGGATCGGTACAACGGCGGCGGCGGCGGCGGCGAGGAGGGGGATGAGCAG
CTGGACCTCAACCTGTCGCTGCAGCCGTCGCAGGCGAACGAGCCGCCGGGGTACTTCACC
TGCACCTACTGCGACAAGAAGTTCTACTCGTCGCAGGCGCTGGGCGGCCACCAGAACGCC
CACAAGTTCGAGCGCAGCGTCGCCAAGCGCACCCGGGAGCTCGCCGCGGCGCGCCGCCAG
CAGGCCGCCGACGAGGAGGCGCGGCGAGGGGCAGGGACCACCACCACCAGGGAGCCCACG
GGCAATGCCTCGTCGTCGTACCAGAGGGCGTCGCCGCCGGCGGAGGCTCGCCGCCGGGAC
CTCCTCACCGACGACATCGACCTGTCCCTGAAGCTATGATCGATGATTAGTTAATTTTCT
CGGCGCCGGCTCCGGCTGTGTGGCTGGATTCCTGCTTGTATATGTGTTCTTGTCACTGCT
GGAAATCTCATATGATGATCAATGAAACGAAATTAATCTC