Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0424600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:15400717:15406406:1 gene:Os09g0424600 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD superfamily (subfamily IG) hydrolase, 5'-Nucleotidase protein. (Os09t0424600-01);Similar to predicted protein. (Os09t0424600-02)
Sequence	ATGGCGGCGGCGCGGCTCCGGCTGCTGTCCGCGGGGCTCCTCTCGCCGGCGGTGTCCAGG GCGCGGCACTCTTCTTCCCTGCAGGGTCTCCGCGCGCTGTCCACGCTCTCCACTACGCTC GGGTCCGGCGCGGGGGAGGACGAGATCGAGCGCATCCGCCGCGAGTTCGAGGACGCCAAG CGGAACTACCTCAGCATCCCCGTCGCCATCAAGGACATGGCCAAGATGAACCCGCAAGGC ATTTATGTGAACAAGAACGTCAAACTGGATGACCTGCAAGTCTATGGTTTTGACTATGAC TACACGCTGTCCCACTACTCCGAGCACCTGCAGTGCTTGATCTACGATCTCGCCAAGAAG CACTTGGTCAATGAGTTGAAGTATCCGGAGAGCTGCTTGAAGTATGAGTATGACCACGGC TTTCCCATCAGGGGGCTCTATTATGACAGATTAAAAGGTTGCCTTTTGAAGCTTGATTTT TTCGGGTCTATCGAACCAGATGGTTGCTTCTTTGGGCGGCATAAGCTGAGTTTGAGTGAG ATAAAAGAACTCTATGGCACACGGCATATTGGCAGAGATCAAGCTCGCCAGCTTGTTGGG CTAATGGATGTCTTCTGTTTTAGTGAGGCATGCCTTCTTGCTGATATAGTTCAGCACTTT GTAGATGCCAGGCTGGAGTTTGATGCATCCTATGTATATGAAGACGTAAACCAATCGATT CAGCATGTCCACAGAAGTGGTCTGATTCACAGGAAAATTCTTTCGGAGCCTCAGAAATAT CTGATAAAAAATAGCCAGGTCTTCCGTTTCTTAAAGATGCTAAGAGAGAAGGGGAAAAAC CTATTTCTTCTCACCAACTCACCTTTCTACTTTGTGGATGGAGGAATGAGCTACTTGCTT GAGGATGAGCATTTTGATGGGAATTCCTGGAGGGAGCTCTTTGACGTTGTCATTGCGCAG GCAAATAAACCGACTTTCTATAATTCAGACCACCCATTCAGGGTATATGACACTCAAAAG GATACACTAGCTTTTACTGCAGTTGACAAGTTTCTGCCAAATGAAGTTTATTATCACGGT TGCTTAAAATCATTTCTGCAGATTACAAAGTGGAGAGGCCCAGAGGTTATATACTTTGGT GATCATCTTCTCAGTGACTTGAGAGGGCCTGCAAAAGCTGGCTGGCGAACAGCTGCTGTA ATTCGTGAACTTGAGGATGAAATAGAAATCCAGAATGGTGACAGCTACCGGTTCCAACAG GCAAAATTAAGTATAATACATGATCTACTTGGGAAAGTTCATGCAACTGTGGTTAGCACT GAGAAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGT CGATCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACT GGAAGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAG CTTGAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAG ATAATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAG

Peptide Sequence

PEP ID	Os09t0424600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:15400717:15406406:1 gene:Os09g0424600 transcript:Os09t0424600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD superfamily (subfamily IG) hydrolase, 5'-Nucleotidase protein. (Os09t0424600-01);Similar to predicted protein. (Os09t0424600-02)
Sequence	MAAARLRLLSAGLLSPAVSRARHSSSLQGLRALSTLSTTLGSGAGEDEIERIRREFEDAK RNYLSIPVAIKDMAKMNPQGIYVNKNVKLDDLQVYGFDYDYTLSHYSEHLQCLIYDLAKK HLVNELKYPESCLKYEYDHGFPIRGLYYDRLKGCLLKLDFFGSIEPDGCFFGRHKLSLSE IKELYGTRHIGRDQARQLVGLMDVFCFSEACLLADIVQHFVDARLEFDASYVYEDVNQSI QHVHRSGLIHRKILSEPQKYLIKNSQVFRFLKMLREKGKNLFLLTNSPFYFVDGGMSYLL EDEHFDGNSWRELFDVVIAQANKPTFYNSDHPFRVYDTQKDTLAFTAVDKFLPNEVYYHG CLKSFLQITKWRGPEVIYFGDHLLSDLRGPAKAGWRTAAVIRELEDEIEIQNGDSYRFQQ AKLSIIHDLLGKVHATVVSTEKGQVYRALLDELNAERRQCRSAMRDLFNSSFGATFLTDT GRESSFAYHIHQYADIYTSKLENFLSYAPESWLHPPHDIKIMPHNAKVPASLFSGS

Transcript Sequence

Transcript ID	Os09t0424600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:15400717:15406406:1 gene:Os09g0424600 gene_biotype:protein_coding transcript_biotype:protein_coding description:HAD superfamily (subfamily IG) hydrolase, 5'-Nucleotidase protein. (Os09t0424600-01);Similar to predicted protein. (Os09t0424600-02)
Sequence	GGCCGTCGCCGTCTCCCGCCTTCGTCCTCCCCTCCAGCCGCCGACCGACCGAGCGCGATG GCGGCGGCGCGGCTCCGGCTGCTGTCCGCGGGGCTCCTCTCGCCGGCGGTGTCCAGGGCG CGGCACTCTTCTTCCCTGCAGGGTCTCCGCGCGCTGTCCACGCTCTCCACTACGCTCGGG TCCGGCGCGGGGGAGGACGAGATCGAGCGCATCCGCCGCGAGTTCGAGGACGCCAAGCGG AACTACCTCAGCATCCCCGTCGCCATCAAGGACATGGCCAAGATGAACCCGCAAGGCATT TATGTGAACAAGAACGTCAAACTGGATGACCTGCAAGTCTATGGTTTTGACTATGACTAC ACGCTGTCCCACTACTCCGAGCACCTGCAGTGCTTGATCTACGATCTCGCCAAGAAGCAC TTGGTCAATGAGTTGAAGTATCCGGAGAGCTGCTTGAAGTATGAGTATGACCACGGCTTT CCCATCAGGGGGCTCTATTATGACAGATTAAAAGGTTGCCTTTTGAAGCTTGATTTTTTC GGGTCTATCGAACCAGATGGTTGCTTCTTTGGGCGGCATAAGCTGAGTTTGAGTGAGATA AAAGAACTCTATGGCACACGGCATATTGGCAGAGATCAAGCTCGCCAGCTTGTTGGGCTA ATGGATGTCTTCTGTTTTAGTGAGGCATGCCTTCTTGCTGATATAGTTCAGCACTTTGTA GATGCCAGGCTGGAGTTTGATGCATCCTATGTATATGAAGACGTAAACCAATCGATTCAG CATGTCCACAGAAGTGGTCTGATTCACAGGAAAATTCTTTCGGAGCCTCAGAAATATCTG ATAAAAAATAGCCAGGTCTTCCGTTTCTTAAAGATGCTAAGAGAGAAGGGGAAAAACCTA TTTCTTCTCACCAACTCACCTTTCTACTTTGTGGATGGAGGAATGAGCTACTTGCTTGAG GATGAGCATTTTGATGGGAATTCCTGGAGGGAGCTCTTTGACGTTGTCATTGCGCAGGCA AATAAACCGACTTTCTATAATTCAGACCACCCATTCAGGGTATATGACACTCAAAAGGAT ACACTAGCTTTTACTGCAGTTGACAAGTTTCTGCCAAATGAAGTTTATTATCACGGTTGC TTAAAATCATTTCTGCAGATTACAAAGTGGAGAGGCCCAGAGGTTATATACTTTGGTGAT CATCTTCTCAGTGACTTGAGAGGGCCTGCAAAAGCTGGCTGGCGAACAGCTGCTGTAATT CGTGAACTTGAGGATGAAATAGAAATCCAGAATGGTGACAGCTACCGGTTCCAACAGGCA AAATTAAGTATAATACATGATCTACTTGGGAAAGTTCATGCAACTGTGGTTAGCACTGAG AAAGGACAAGTTTACCGAGCATTGCTTGATGAGTTGAATGCAGAAAGGCGTCAATGTCGA TCTGCGATGCGAGATCTTTTCAATAGCTCTTTTGGTGCAACCTTCCTTACAGATACTGGA AGGGAATCATCGTTTGCTTATCACATCCATCAATATGCAGATATTTACACCAGCAAGCTT GAGAATTTTTTGTCATATGCCCCTGAATCATGGCTCCATCCACCTCATGACATAAAGATA ATGCCACATAATGCGAAGGTCCCAGCGAGTTTGTTCAGTGGCTCGTAGCTCATTCTATCC ATTTCCGATGGAGAACCGTAACACCCATTATGGTTTCTGTGTCCGACCCGAGAGTATGAA CTGCCATGCCACTGCATCTGGTTAGCTGATGAATAAAGCTTGGGTACACCCAACCCAACA TACGTGGCGCCAACTCAGCAAGATGTGGCTAGTGCTGCGATTGACAGAAGAGAAGTGATG GTTGTTATGTTCTGTACCGTTATTTGAGGATGATTTCGGTCTGACAGGCGTGGTTTTCTG TTTCCAAGACATCCAGAGGACTAAACAACCAACCAAATGATGGTTGCTAATAAGAATTGT TTTCCAATCATCCATCTTGTTTCTCATTGTTCTATTCTCCTTTTGGATGAGATATGTAAA ACACACATGATTCGTATTCCGTTAACAGTAAAATCTCCCAAATTATGGGTAATCCTTTTC CTTCAAGCTTCTTTTGAATGATCAGCAAGCAAGGAATGGATAAACATATACAGTATTTGA ATTTG