Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0422600-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:15286328:15292578:-1 gene:Os09g0422600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF566 family protein. (Os09t0422600-01)
Sequence	ATGGATGTCCTCAAGAGTGATGTGAAGAAGACTGGTATTCTCAATGAGACTCTAAGACCA CCGCTAGTTCCATCCGAGAAGCATAATGCTTCTCCAGTAAACCGTGGGAGAGATGTTGCT TCCAGGTACAAGAATGGTCTGTCTGCTCATTCTGCTGCCACCACAGCAAGGAGATGCACA TCACCAAGTCCTGGGCGGACCTCCGCAAATGAATGCACACCAGAACCAAAAAGAGCTCAA TCAGCAGACAGAAGAAGGCCCTCAACTCCTTCTTCTAGAGTGTCAACACCCTCCACCCCT GCATCAAGGTCTGTCACACCAGTTCGTAATACTGTTACAGAGGGACATAAGAGTTCTAGG CGAATAACAAGCACAAGGAATACTGATGGCTTGTGGCCAGCAATGCGAAACCTATCTTCC TCTTTCCAGTCAGAATCTGTGGTTACCCCCGGTAATAAAAAGGATAAGGTAGTCCCCAGT GGATCTTTGGATCAAACGAAGGGGCAAGCTAGTGTTATAGCCGAGAGGAAGAGGAGTCCT CTGAGAAGGAAGAACATTGGTGAACAATGTGAGAATGCTCAACCCTCAGAGGACCAACCT AGGAGGGTAATCGAACAACACCGCTGGCCAGCAATGCAGAGTGGCCGTGTGGCCAGCAAT ATTTTGTCAAGGAGTATTGACATGTCTGACAAAGCTGGCAGATCAGTCCCTTCAACAAAT ATTTCTAGAGGTGTTTCACCAAGGAAGACGCTTGCTTCTGAAGGCACAGGCAAAGGGTTT AATAAATCATTGGATGAGGTAGCAAGGAGATTGGCTATTCATGCAGGTGGAAGAGATGAC AAAGTAGACTCTCGCTGTCATGCTTATTCACAGTCAACAGAGAGATGTAAATCCGTTAGC CGTCCAAGTAGGGCAGTTACTTTACCTGTTCCTGTTCTTCATCGCTCATCTTCGCCAAGC AAGGCCTCTTCAGTTACATCCTCTATTTCTAGGTCCTTTCAGAGCCCATCTCGGACAAGG CCTTCAACACCTAGCCGGTCACAAAGTGCTGGAAGTATTCAATCAGGTGTTGCGTCACCT ATTATTAGCTACATGGTTGATGCAAAAAAAGGAAAGAAGAACTCCAGCCAAATTGAAAAT ATCCACCAATTGCACCTGTCTTATAATAGATACTTGCAATGGATCTTTGTAAATGCTTAT GCAGAAGATACTATGTCTTTCCAAAAAGTGACAGCTGAGAGTATTATATATAATGTTTTG AGGAATACCTCGAACTTGCGGGATGTTGTTAATATGAGAAGAATCATGGTTCAATGCATA CAACAAGAGTTGAAGCTACATGGCATTCTTAAAGAGCAGATTGATTACCTTGAACAATGG CCAGCACTTGAAAAGGAGAACAGTATTTCATTATTCCACGCAACTGAAGCTCTAAAAGCA AGCACATTGCGTCTTCCAGTTACATCAGGAGCAAAGGCTGATGTAGTTGCTCTTAAGAAT GCCGTAAGCTCTGCTGTTGATATCATGCAAGGTTTGGGATCAGCGGTTCGCTGTATGCTT CCAAAGGTTGAGGACAGGACATATTTGGTATCAGAACTTTCAGTTATAGCAAGACAAGAA AAGGCCATGCTTGATGAATGCAGAGAATTATTAGCTATGGCAGCAAAACTACAGGTACAG GAGTCCAGCCTGCGGACGCATCTCACACAACTGAGGCCTGGAATTGCTCATATGATTTGA

Peptide Sequence

PEP ID	Os09t0422600-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:15286328:15292578:-1 gene:Os09g0422600 transcript:Os09t0422600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF566 family protein. (Os09t0422600-01)
Sequence	MDVLKSDVKKTGILNETLRPPLVPSEKHNASPVNRGRDVASRYKNGLSAHSAATTARRCT SPSPGRTSANECTPEPKRAQSADRRRPSTPSSRVSTPSTPASRSVTPVRNTVTEGHKSSR RITSTRNTDGLWPAMRNLSSSFQSESVVTPGNKKDKVVPSGSLDQTKGQASVIAERKRSP LRRKNIGEQCENAQPSEDQPRRVIEQHRWPAMQSGRVASNILSRSIDMSDKAGRSVPSTN ISRGVSPRKTLASEGTGKGFNKSLDEVARRLAIHAGGRDDKVDSRCHAYSQSTERCKSVS RPSRAVTLPVPVLHRSSSPSKASSVTSSISRSFQSPSRTRPSTPSRSQSAGSIQSGVASP IISYMVDAKKGKKNSSQIENIHQLHLSYNRYLQWIFVNAYAEDTMSFQKVTAESIIYNVL RNTSNLRDVVNMRRIMVQCIQQELKLHGILKEQIDYLEQWPALEKENSISLFHATEALKA STLRLPVTSGAKADVVALKNAVSSAVDIMQGLGSAVRCMLPKVEDRTYLVSELSVIARQE KAMLDECRELLAMAAKLQVQESSLRTHLTQLRPGIAHMI

Transcript Sequence

Transcript ID	Os09t0422600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:15286328:15292578:-1 gene:Os09g0422600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF566 family protein. (Os09t0422600-01)
Sequence	GGGGTTTAGTAGTAGTCCTCCATGGCTTAACAACAAGAGAAGCGCGCAATTAGGGAAACC GTTTGGTCTTCCTTAATTGCGCCCTCGCCCCCGCGGCAACCGTCCTTCTCCTCCATCTCC CCTTCCACGCCGCTGCCCTCCCCTCTCCTCTCCCCTCCCGCCGAGAAATCGGTAAGTAGT GGACTAGTCGCTGCGACTCCGCGAGGGTTCCCCGGCTGCTTGTCCACGGGATCCCACGAC CCGGCGGCGTTGCGGCGAGGAGGAGGAGAGCAGTTTGGGGGTCTCGCCGCGATCGCTGAG ATCTCAGTTTGCCAAGGGGTTCAAGTTTCATGAGTCATCTTGACGTTGTTACTACTGTGG AAGTTGCAATTCTTCATGGATGTCCTCAAGAGTGATGTGAAGAAGACTGGTATTCTCAAT GAGACTCTAAGACCACCGCTAGTTCCATCCGAGAAGCATAATGCTTCTCCAGTAAACCGT GGGAGAGATGTTGCTTCCAGGTACAAGAATGGTCTGTCTGCTCATTCTGCTGCCACCACA GCAAGGAGATGCACATCACCAAGTCCTGGGCGGACCTCCGCAAATGAATGCACACCAGAA CCAAAAAGAGCTCAATCAGCAGACAGAAGAAGGCCCTCAACTCCTTCTTCTAGAGTGTCA ACACCCTCCACCCCTGCATCAAGGTCTGTCACACCAGTTCGTAATACTGTTACAGAGGGA CATAAGAGTTCTAGGCGAATAACAAGCACAAGGAATACTGATGGCTTGTGGCCAGCAATG CGAAACCTATCTTCCTCTTTCCAGTCAGAATCTGTGGTTACCCCCGGTAATAAAAAGGAT AAGGTAGTCCCCAGTGGATCTTTGGATCAAACGAAGGGGCAAGCTAGTGTTATAGCCGAG AGGAAGAGGAGTCCTCTGAGAAGGAAGAACATTGGTGAACAATGTGAGAATGCTCAACCC TCAGAGGACCAACCTAGGAGGGTAATCGAACAACACCGCTGGCCAGCAATGCAGAGTGGC CGTGTGGCCAGCAATATTTTGTCAAGGAGTATTGACATGTCTGACAAAGCTGGCAGATCA GTCCCTTCAACAAATATTTCTAGAGGTGTTTCACCAAGGAAGACGCTTGCTTCTGAAGGC ACAGGCAAAGGGTTTAATAAATCATTGGATGAGGTAGCAAGGAGATTGGCTATTCATGCA GGTGGAAGAGATGACAAAGTAGACTCTCGCTGTCATGCTTATTCACAGTCAACAGAGAGA TGTAAATCCGTTAGCCGTCCAAGTAGGGCAGTTACTTTACCTGTTCCTGTTCTTCATCGC TCATCTTCGCCAAGCAAGGCCTCTTCAGTTACATCCTCTATTTCTAGGTCCTTTCAGAGC CCATCTCGGACAAGGCCTTCAACACCTAGCCGGTCACAAAGTGCTGGAAGTATTCAATCA GGTGTTGCGTCACCTATTATTAGCTACATGGTTGATGCAAAAAAAGGAAAGAAGAACTCC AGCCAAATTGAAAATATCCACCAATTGCACCTGTCTTATAATAGATACTTGCAATGGATC TTTGTAAATGCTTATGCAGAAGATACTATGTCTTTCCAAAAAGTGACAGCTGAGAGTATT ATATATAATGTTTTGAGGAATACCTCGAACTTGCGGGATGTTGTTAATATGAGAAGAATC ATGGTTCAATGCATACAACAAGAGTTGAAGCTACATGGCATTCTTAAAGAGCAGATTGAT TACCTTGAACAATGGCCAGCACTTGAAAAGGAGAACAGTATTTCATTATTCCACGCAACT GAAGCTCTAAAAGCAAGCACATTGCGTCTTCCAGTTACATCAGGAGCAAAGGCTGATGTA GTTGCTCTTAAGAATGCCGTAAGCTCTGCTGTTGATATCATGCAAGGTTTGGGATCAGCG GTTCGCTGTATGCTTCCAAAGGTTGAGGACAGGACATATTTGGTATCAGAACTTTCAGTT ATAGCAAGACAAGAAAAGGCCATGCTTGATGAATGCAGAGAATTATTAGCTATGGCAGCA AAACTACAGGTACAGGAGTCCAGCCTGCGGACGCATCTCACACAACTGAGGCCTGGAATT GCTCATATGATTTGACAATCTAAGGGAAGATCTGCAAGTCCCAGACCAGCCTTCTGAACA GGTACACCAGTGCAAGTTGAGCCTCTGGCGATATGAACATATTGTGCAAACATACAAGGA GTTTGTAGAGATGAAATAATAGACCAAAAGAACGTTGAACATCCCCTGGTGATCATGGAG TGATGCTGTGCAGCTAACAACTCATGGTGCGGTACAGATGATAGATTTACTTAAAAGGTC TCCTCATGTGTAAATAAATTCATTCAGGTTCCCCACACCCACCTACCTCTCTTTAGTTTC TCTAAAATTATTTGTTAGTATTTCTACAATGATAGAGCTATGTTCTTTCCGATTGTATTT TTTGGCATCTGGAAAGAAAATACACAGATGAAATGGAAGGGCAAAAGTAATG