Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0422000-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:15252011:15256325:-1 gene:Os09g0422000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hydroxycinnamoyl CoA:shikimate/quinate hydroxycinnamoyl transferase 3 description:Transferase family protein. (Os09t0422000-01)
Sequence	ATGAAGGTGGAGGTGGTGGAGACGACGCTGGTGGCGCCGAGCGAGGCGACGCCGCAGCAC GCGCTGTGGCTCTCCAACCTCGACCTCGCCGTGCCCAAGACGCACACCCCGCTGGTCTAC TACTACCCCGCGCCCTCGCCGCCGCCGGCGGATGCGGGGGCGGAGGCGGAGGCGGAGGGG TTCTTCGCACCGGAGAGGCTGCGGGAGGCGCTGGCGAGGGCGCTGGTGCCGTTCTACCCG CTGGCGGGGCGGCTGGCGGCGGGGCCCGGCGGCCGGCTCGAGATCGACTGCAACGGCGAG GGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGAGATGTTCACCGACTTC GAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTTCGCCGCCTCCGGCGAGCCCCCC TGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGGCGTGGCCGTCGGCACG GGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTTCATCCGGACGTGGACG GGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCCGCCGTCGCACGACCGC ACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCACCCGGTGTACTCCCCG AGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTACTCCGTCCCGCCCAAG CTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCACGTACGGCGCGGTGACC GCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCACGACGCCGAGTCGCGG CTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCTCCCGTCGCCCTACTTC GGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGACATCCTGTCGCAGCCG CTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGTGGACGACGCGTTCGTC CGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAACCAGGCGGCGCGCGGG CAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGGGATGCCCATCTACGAC GCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCAGATGTTCGGCAGCGGC ACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGGCGGCGGCGTGTCCGTG CTGTTCGCGCTCGAACCGGAGTACATCCAGTGCTTTGAGAAGGCCTTCTACGGCACAGAG TGA

Peptide Sequence

PEP ID	Os09t0422000-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:15252011:15256325:-1 gene:Os09g0422000 transcript:Os09t0422000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hydroxycinnamoyl CoA:shikimate/quinate hydroxycinnamoyl transferase 3 description:Transferase family protein. (Os09t0422000-01)
Sequence	MKVEVVETTLVAPSEATPQHALWLSNLDLAVPKTHTPLVYYYPAPSPPPADAGAEAEAEG FFAPERLREALARALVPFYPLAGRLAAGPGGRLEIDCNGEGALFVVARADFTGDEMFTDF EPSPEARRLLVPFAASGEPPCVLAMVQVTFLKCGGVAVGTGMHHVTMDGAGAFQFIRTWT GLSRGLDAAAASPSPPSHDRTLLRARSPPHVPFEHPVYSPSYLNGLPRPFVTRVYSVPPK LLADIKAACAPGVSTYGAVTAHLWRAMCVARGLPHDAESRLRVPANIRQRVRPPLPSPYF GNAIVRDLVTVPVRDILSQPLGFVAERIKHAVARVDDAFVRSVIDFLELESEKGNQAARG QFMPETDLWVVSWLGMPIYDADFGWGRPAFVAPAQMFGSGTAYVTQAPDKDDGSGGGVSV LFALEPEYIQCFEKAFYGTE

Transcript Sequence

Transcript ID	Os09t0422000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:15252011:15256325:-1 gene:Os09g0422000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hydroxycinnamoyl CoA:shikimate/quinate hydroxycinnamoyl transferase 3 description:Transferase family protein. (Os09t0422000-01)
Sequence	ACACACAGAAATTCACACCCAAGCCGCTGTCACAAGCAAGGCATCCACACACACACAGAG AGGTAGAGAGGGCGAGATGAAGGTGGAGGTGGTGGAGACGACGCTGGTGGCGCCGAGCGA GGCGACGCCGCAGCACGCGCTGTGGCTCTCCAACCTCGACCTCGCCGTGCCCAAGACGCA CACCCCGCTGGTCTACTACTACCCCGCGCCCTCGCCGCCGCCGGCGGATGCGGGGGCGGA GGCGGAGGCGGAGGGGTTCTTCGCACCGGAGAGGCTGCGGGAGGCGCTGGCGAGGGCGCT GGTGCCGTTCTACCCGCTGGCGGGGCGGCTGGCGGCGGGGCCCGGCGGCCGGCTCGAGAT CGACTGCAACGGCGAGGGGGCGCTGTTCGTCGTCGCCAGGGCCGACTTCACCGGCGACGA GATGTTCACCGACTTCGAGCCCTCCCCCGAGGCCCGCCGCCTCCTCGTCCCCTTCGCCGC CTCCGGCGAGCCCCCCTGCGTCCTCGCCATGGTCCAGGTGACGTTCCTGAAGTGTGGAGG CGTGGCCGTCGGCACGGGCATGCACCATGTCACGATGGACGGCGCGGGCGCGTTCCAGTT CATCCGGACGTGGACGGGGCTGTCGCGTGGGCTCGACGCCGCGGCCGCGTCGCCGTCGCC GCCGTCGCACGACCGCACCCTCCTCCGGGCGCGCTCGCCGCCGCACGTCCCGTTCGAGCA CCCGGTGTACTCCCCGAGCTACCTCAACGGGCTGCCGCGGCCGTTCGTGACCCGCGTCTA CTCCGTCCCGCCCAAGCTCCTCGCCGACATCAAGGCCGCCTGCGCCCCCGGCGTGTCCAC GTACGGCGCGGTGACCGCGCACCTGTGGCGCGCCATGTGCGTCGCCCGGGGGCTCCCCCA CGACGCCGAGTCGCGGCTGCGCGTCCCGGCCAACATCCGGCAGCGCGTCCGCCCGCCGCT CCCGTCGCCCTACTTCGGCAACGCCATCGTGCGCGACCTCGTCACGGTGCCCGTCCGCGA CATCCTGTCGCAGCCGCTGGGGTTCGTGGCGGAGCGGATCAAGCACGCGGTGGCGCGCGT GGACGACGCGTTCGTCCGCTCGGTGATCGACTTCCTGGAGCTGGAGTCCGAGAAGGGGAA CCAGGCGGCGCGCGGGCAGTTCATGCCGGAGACGGACCTGTGGGTGGTGAGCTGGCTCGG GATGCCCATCTACGACGCCGACTTCGGGTGGGGGCGCCCGGCGTTCGTGGCGCCGGCGCA GATGTTCGGCAGCGGCACGGCGTACGTGACGCAGGCGCCGGACAAGGACGACGGCAGCGG CGGCGGCGTGTCCGTGCTGTTCGCGCTCGAACCGGAGTACATCCAGTGCTTTGAGAAGGC CTTCTACGGCACAGAGTGATATGATGCGGCGGCGGCGGCGGTGGCCGGAGTTTAGAGCTG GAGGACATCGAGCGACCTGGGATGCATGATGACGCCGAGGTGGTGTCGACGTCTGCTGAC TCTGTGTCATGCTCAATACATAACATAATATGCGTTATTTGATTTGCGGTAGAAGTATTT AGTGTATGCTGGTACTGTGCAACAGTGCAAGTGTAATGAGCTGCTGCCTTGTTGGTTGCA GCTCTCTCTACACAGACACTTTGGTCTGTCTTAAGTTCGTATGTACAAAAAAAAAATCAA ATGGAAATGAAAATGACTATGGAAGC