Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0420600-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:15153787:15157002:-1 gene:Os09g0420600 gene_biotype:protein_coding transcript_biotype:protein_coding description:PDZ/DHR/GLGF domain containing protein. (Os09t0420600-01)
Sequence

ATGGTGGCGACGAACCTGAAGGCGGAGACGGTGGGGCTGATGGACCGGCGGGCGGCGGTG
GAGGCGGAGATGGACGCCATCATCGCCGCCCTCTCCGTGCCCGTCGGGCCGGGGATCACC
GGCGGCCTCGTGGACGCGGAGGGTTTCCCCAGGTCCGACATCGACATCCCGGCCGTCCTC
GCCCAGCGCCGCAAGCTCGCCGAATTGCGGAATGATCACAAGGATATTACGAACAAAATT
GAGAAGAATCTGGAAGTTTTGCACTCAACAAAATTGTCAAGAAATGAAGCGTCAATCCCT
GCAAGTTCTGGCACACCTGCTTCATTGCACAGTGGGTTATCTCAAAATGATCCTATGGAA
GAAGATGCTGTGACCAGACTTCCTTTTGCCATAATTGATGAACTGACAGATGGTTCTCCT
GCTGCTGTGGATGGCTTGCAGCTTTGGGATGAGATAGTAAAGTTTGGAAATGTGGAAGCA
GGTGATAGATTGCAAGAAAGGCTTGTCTCTGAAGCTCTTTCCAATGAGGATTGTCAAGTA
TCTCTAGTCATCATTCGTCAGGGATCATCAATGAACTTAACTGTTACACCAAGAAAGTGG
CACGGAAGAGGACTTTTGGGATGCCATTTCCGAATCTTATGA

Peptide Sequence

PEP ID

Os09t0420600-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:15153787:15157002:-1 gene:Os09g0420600 transcript:Os09t0420600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:PDZ/DHR/GLGF domain containing protein. (Os09t0420600-01)
Sequence

MVATNLKAETVGLMDRRAAVEAEMDAIIAALSVPVGPGITGGLVDAEGFPRSDIDIPAVL
AQRRKLAELRNDHKDITNKIEKNLEVLHSTKLSRNEASIPASSGTPASLHSGLSQNDPME
EDAVTRLPFAIIDELTDGSPAAVDGLQLWDEIVKFGNVEAGDRLQERLVSEALSNEDCQV
SLVIIRQGSSMNLTVTPRKWHGRGLLGCHFRIL

Transcript Sequence

Transcript ID

Os09t0420600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:15153787:15157002:-1 gene:Os09g0420600 gene_biotype:protein_coding transcript_biotype:protein_coding description:PDZ/DHR/GLGF domain containing protein. (Os09t0420600-01)
Sequence

CGTCGCTTCCACGAGAAGCAGCAGCAGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGGGAGGGAGAGGGAAGCAATGGTGGCGACGAACCTGAAGGCGGAGACGGTGGG
GCTGATGGACCGGCGGGCGGCGGTGGAGGCGGAGATGGACGCCATCATCGCCGCCCTCTC
CGTGCCCGTCGGGCCGGGGATCACCGGCGGCCTCGTGGACGCGGAGGGTTTCCCCAGGTC
CGACATCGACATCCCGGCCGTCCTCGCCCAGCGCCGCAAGCTCGCCGAATTGCGGAATGA
TCACAAGGATATTACGAACAAAATTGAGAAGAATCTGGAAGTTTTGCACTCAACAAAATT
GTCAAGAAATGAAGCGTCAATCCCTGCAAGTTCTGGCACACCTGCTTCATTGCACAGTGG
GTTATCTCAAAATGATCCTATGGAAGAAGATGCTGTGACCAGACTTCCTTTTGCCATAAT
TGATGAACTGACAGATGGTTCTCCTGCTGCTGTGGATGGCTTGCAGCTTTGGGATGAGAT
AGTAAAGTTTGGAAATGTGGAAGCAGGTGATAGATTGCAAGAAAGGCTTGTCTCTGAAGC
TCTTTCCAATGAGGATTGTCAAGTATCTCTAGTCATCATTCGTCAGGGATCATCAATGAA
CTTAACTGTTACACCAAGAAAGTGGCACGGAAGAGGACTTTTGGGATGCCATTTCCGAAT
CTTATGAACAACGGGCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGT
GCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGAT
TAACCTATGAAAGGATTAAATGCTTTCATGTTTGTACTTGTGCAGACAGCCCTTGCAGCA
CCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACAT
GTACATTGGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATTGTTCTC
ATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAA
ATCTGAGTCTGTTGGCACT