Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0419500-02
CDS Infomation	cds chromosome:IRGSP-1.0:9:15090674:15092888:1 gene:Os09g0419500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ubiquitin-protein ligase/ zinc ion binding protein. (Os09t0419500-01);Zinc finger, C6HC-type domain containing protein. (Os09t0419500-02)
Sequence	ATGGGATCGCCCATGTCGCGGCCGGCGACTGCGGATGGGAGCGCGCGCGGAGGAGGGCTA GCCTTGGCTATCGCGGACGAGCTCCCTCAAGAGGCCGTTGCCAAGCCTGCCTTGATGAGT CAGGTCATGGCCGGGAACAGCTCTATGGTGGCAAAGATGGATGAGGTTTCCAGGGTAGCT GATGATCTGATGTTCGCTGAAGATCTGCAGCTGGAAGAGGTCATCCGGTTCTCAGCTCAC TCAGCTGGACCGAACTGCGCGGTGTGCGGGCAGGCGACCCCGTCGGTGGATGCCTCATGG AAGCCTGACTACTGCACCATCTGCATGGAGACGGTGGACGCCATAGAGCGGTTCGCCATC CCCGGGTGCACGCACGCCTTCTGCGCCAGCTGCGTGCGCCAGTACATCGCCGCCAAGGTG GAGGAGAACGTGCTGTCCATCGGCTGCCCCGACCCGGGGTGTAAGGACAGCGGCGGCGGC GCGCTGCACCCGGAGGCGTGCCGTGACGTGATCCCGCCGCAGCTGTTTCAGAGGTGGGGC GACGCGCTCTGCGACTCGGCGCTGTCGTCGCTCAAGTTCTACTGCCCCTTCAGCGACTGC TCGGCGCTGCTGGTGGACGACCCAGGCGACGGCGAGGAGGCGATCACGGACGCCGAGTGC CCGCACTGCAGCCGGATGTTCTGCGCCCAGTGCAAGGTGCCGTGGCACGGCGGTGCCACC TGCGCCGAGTTCCAGAAGCTCGGCAAGGACGAGCGCGGCCGGGACGACCTGCTGCTGAGG AAGGTGGCGAAGGACAGCAAGTGGCAGAGGTGCCCCAAGTGCAAGATGTACGTGGAGAGA GTCGAAGGCTGCGTGTTCATCATCTGCAGGTGTGGCCACTGCTTCTGCTACCTCTGTGCA TCGCCAATGTCGAGGGACAACCACCATTGCAAGAAGTGCAAGCGAACGTGGTGA

Peptide Sequence

PEP ID	Os09t0419500-02
PEP Infomation	pep chromosome:IRGSP-1.0:9:15090674:15092888:1 gene:Os09g0419500 transcript:Os09t0419500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ubiquitin-protein ligase/ zinc ion binding protein. (Os09t0419500-01);Zinc finger, C6HC-type domain containing protein. (Os09t0419500-02)
Sequence	MGSPMSRPATADGSARGGGLALAIADELPQEAVAKPALMSQVMAGNSSMVAKMDEVSRVA DDLMFAEDLQLEEVIRFSAHSAGPNCAVCGQATPSVDASWKPDYCTICMETVDAIERFAI PGCTHAFCASCVRQYIAAKVEENVLSIGCPDPGCKDSGGGALHPEACRDVIPPQLFQRWG DALCDSALSSLKFYCPFSDCSALLVDDPGDGEEAITDAECPHCSRMFCAQCKVPWHGGAT CAEFQKLGKDERGRDDLLLRKVAKDSKWQRCPKCKMYVERVEGCVFIICRCGHCFCYLCA SPMSRDNHHCKKCKRTW

Transcript Sequence

Transcript ID	Os09t0419500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:15090674:15092888:1 gene:Os09g0419500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to ubiquitin-protein ligase/ zinc ion binding protein. (Os09t0419500-01);Zinc finger, C6HC-type domain containing protein. (Os09t0419500-02)
Sequence	GACGCGTAGCGTAACCCAAAAATCTACCAAAAGCCACCACCGGCGCATCAACTCCGACGA AACCGGCAGCAGGTATCCCGATGGCCTACTAAGCCCCACGACGCTTCGGCGACCGGGACG ACGACGCCGACGACGACGCCTCGTTCTCCTCCTCCTCCTCCTCTCCGTCTCCCCCTCCGA CTACTTCTTCCCCCCACGAGGCTCTCCCAGCTTGCGCGCGCGCACGATGGGATCGCCCAT GTCGCGGCCGGCGACTGCGGATGGGAGCGCGCGCGGAGGAGGGCTAGCCTTGGCTATCGC GGACGAGCTCCCTCAAGAGGCCGTTGCCAAGCCTGCCTTGATGAGTCAGGTCATGGCCGG GAACAGCTCTATGGTGGCAAAGATGGATGAGGTTTCCAGGGTAGCTGATGATCTGATGTT CGCTGAAGATCTGCAGCTGGAAGAGGTCATCCGGTTCTCAGCTCACTCAGCTGGACCGAA CTGCGCGGTGTGCGGGCAGGCGACCCCGTCGGTGGATGCCTCATGGAAGCCTGACTACTG CACCATCTGCATGGAGACGGTGGACGCCATAGAGCGGTTCGCCATCCCCGGGTGCACGCA CGCCTTCTGCGCCAGCTGCGTGCGCCAGTACATCGCCGCCAAGGTGGAGGAGAACGTGCT GTCCATCGGCTGCCCCGACCCGGGGTGTAAGGACAGCGGCGGCGGCGCGCTGCACCCGGA GGCGTGCCGTGACGTGATCCCGCCGCAGCTGTTTCAGAGGTGGGGCGACGCGCTCTGCGA CTCGGCGCTGTCGTCGCTCAAGTTCTACTGCCCCTTCAGCGACTGCTCGGCGCTGCTGGT GGACGACCCAGGCGACGGCGAGGAGGCGATCACGGACGCCGAGTGCCCGCACTGCAGCCG GATGTTCTGCGCCCAGTGCAAGGTGCCGTGGCACGGCGGTGCCACCTGCGCCGAGTTCCA GAAGCTCGGCAAGGACGAGCGCGGCCGGGACGACCTGCTGCTGAGGAAGGTGGCGAAGGA CAGCAAGTGGCAGAGGTGCCCCAAGTGCAAGATGTACGTGGAGAGAGTCGAAGGCTGCGT GTTCATCATCTGCAGGTGTGGCCACTGCTTCTGCTACCTCTGTGCATCGCCAATGTCGAG GGACAACCACCATTGCAAGAAGTGCAAGCGAACGTGGTGAATGATCTGAAGCTGCAGAAC TCTGATTGAGTCGAAGAAGTTACTTAAGTTTCGTACTGTTAAAAATGGTCAATTACTATC ATTAACCTAGTTTCTACTTATTAGCCCGTGCCGTACTTAGCATTAATTAGCTCGTATATT ACCACTCTGATGTCATTTGTCAATCAATATCAGTAGTATTACTCC