Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0417500-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:14971348:14975334:1 gene:Os09g0417500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0417500-01)
Sequence	ATGCCGCCCTCTCCGCCGCTCCGCCACCTCCTCTCCTTCCGCCGCCGCCCCCTCGCCCCG CGCTTCCTCCTCCTCCCCCGCCGCTTCTCCGCCTCCGCATCCGCCTCGGCGCTGCAGGCC GCCACCCCGCCCCCCTCATCCTCCTCCGCCGCTCGCCTCGCCGCCGCCGTGCACGGTTCC GCCGCGTCCGGGGACTTCGCGCACGCCATCCGTTTGACGAAACACCTCGTCCGTGCCTCC TCCTCCCCAAGCCATCGCCCCGGCGCCGCCGGCGCCGCCGCCGCCGCGGCGCTCGCCTCC ACCTCCGCGTCGCCGGCCCCCGCGCTCGGCGTGCTCGTCATCGCGCTCTCCCAGATGGCG CTCCCCGACGAGGCGCTCTCCGTCTTCGGCCGCCTCCGAGAGCTGCCGGCATTGCCGGCC TGCAACGCGATCCTCGACGGCCTCGTGAAGGCGCACATGCTCGCCCGCGTATGGGAGCTG TTCGACGAAATGCTTGGTCGGGGGATGGTGCCGAGTGTGGTGACTTACAACACGCTCATC AACGCGTGTCGGCATCAGGGCGATGTGGCGAAGGCTTGGGAGGTCTGGGATCAGATGGTA GCTAGACGGATTGATCCAAATGTGGTCACATATACGACAATGATATGTGCACTCTGTGAG GAGGACTGCATTGGTGACGCTGAGGGGCTTTTCCTTGAGATGAAGGAAGCAGGGATGCGG CCTAATCTATACACATACAATGCATTGATGAGCAGCCACTTCAAGAGAGACAACATCAAG CATGCGCTTGTGTTTTATTACGACTTGCTGAAGTGTGGTCTTGTTCCAAATGATGTGATC TTTACCACTCTAATTGACGGTCTCTGTCAGGCGAACAGGATAACCGAAGCAAAGAATATA TTTCTGGACATGCCCAGGTATGAGGTTGCTCCAACTGTGCCTGTGTACAACAGTTTGATC CACGGAGCTTTTAGGTCTGGATACGCACAAGAAGCATTAGCATTTTTCCAGGAGATTATT CGCAAAGGGTTGCGCCCGGATGAGTTCACCTGCAGCATAGTTGTAAGAGGCCTCTGTGAT GGTGGGCAAATGCAGGTTGCCACCAGGTTTCTTGAAGTAATGCAACAATCTGGTATTGCA CTGAATGCGGCTGCTTACAATGTGCTGATTGATGAGTACTGCAAGAGTGGAAATTTGGAT GAAGCTCTCGTGACATGCACAAGAATGAGCGAGGTTGGAGTAGAGCCCAATGTGGTGACA TACTCCTCCTTGATAGATGGGCACTCGAAGAATGGGGAAATGGAAATAGCAATGGCTATA TACACAGAGATGGTAGCTAAAGGGGTCGAACCTAATGTCGTGACATACACTGCTCTGATT CATGGCCATGCCAAGAATGGTGACATGGATGCTGCTTTTTGGTTACAGAAGGAGATGGAA GAGAAAGGCATTTATTCAAACGCAATAACTGTGTCAGTTCTTGTAGATGGTCTGTGCCGA GAAAATAGGGTACAAGATGCAGTCAGATTCATCATGGAATACTCAGGGCAGAAGAAATCT GAGAAAAACCCTTCAATTGCAAACAGTGTGACATATATGACCTTGATATATGGTCTCTAT ATAGATGGTCAATACAACGAAGCCTGTCACTTCTTCTCTTGTATGAGAGATTCTGGTATG GTGCCTGATAGATTCACTTACACACTCGTGATTCGTGGACTGTGCATGCTTGGCTATGTC TTGAATGCGATGATGCTCTATGCTGATATGGTTAAGGTTGGTGTTAAACCCACAAAATGC GCCATGGTCTGCCCTGATATTTGGTCAAGAGAATCAGTTGACCACCGCATGACCTGA

Peptide Sequence

PEP ID	Os09t0417500-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:14971348:14975334:1 gene:Os09g0417500 transcript:Os09t0417500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0417500-01)
Sequence	MPPSPPLRHLLSFRRRPLAPRFLLLPRRFSASASASALQAATPPPSSSSAARLAAAVHGS AASGDFAHAIRLTKHLVRASSSPSHRPGAAGAAAAAALASTSASPAPALGVLVIALSQMA LPDEALSVFGRLRELPALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTLI NACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGMR PNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKNI FLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCD GGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVT YSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEME EKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLY IDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKPTKC AMVCPDIWSRESVDHRMT

Transcript Sequence

Transcript ID	Os09t0417500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14971348:14975334:1 gene:Os09g0417500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os09t0417500-01)
Sequence	GCGGGCTGCGGCGGCCTTCCCTCCCGAAGGCGAACCCTATGCCGCCCTCTCCGCCGCTCC GCCACCTCCTCTCCTTCCGCCGCCGCCCCCTCGCCCCGCGCTTCCTCCTCCTCCCCCGCC GCTTCTCCGCCTCCGCATCCGCCTCGGCGCTGCAGGCCGCCACCCCGCCCCCCTCATCCT CCTCCGCCGCTCGCCTCGCCGCCGCCGTGCACGGTTCCGCCGCGTCCGGGGACTTCGCGC ACGCCATCCGTTTGACGAAACACCTCGTCCGTGCCTCCTCCTCCCCAAGCCATCGCCCCG GCGCCGCCGGCGCCGCCGCCGCCGCGGCGCTCGCCTCCACCTCCGCGTCGCCGGCCCCCG CGCTCGGCGTGCTCGTCATCGCGCTCTCCCAGATGGCGCTCCCCGACGAGGCGCTCTCCG TCTTCGGCCGCCTCCGAGAGCTGCCGGCATTGCCGGCCTGCAACGCGATCCTCGACGGCC TCGTGAAGGCGCACATGCTCGCCCGCGTATGGGAGCTGTTCGACGAAATGCTTGGTCGGG GGATGGTGCCGAGTGTGGTGACTTACAACACGCTCATCAACGCGTGTCGGCATCAGGGCG ATGTGGCGAAGGCTTGGGAGGTCTGGGATCAGATGGTAGCTAGACGGATTGATCCAAATG TGGTCACATATACGACAATGATATGTGCACTCTGTGAGGAGGACTGCATTGGTGACGCTG AGGGGCTTTTCCTTGAGATGAAGGAAGCAGGGATGCGGCCTAATCTATACACATACAATG CATTGATGAGCAGCCACTTCAAGAGAGACAACATCAAGCATGCGCTTGTGTTTTATTACG ACTTGCTGAAGTGTGGTCTTGTTCCAAATGATGTGATCTTTACCACTCTAATTGACGGTC TCTGTCAGGCGAACAGGATAACCGAAGCAAAGAATATATTTCTGGACATGCCCAGGTATG AGGTTGCTCCAACTGTGCCTGTGTACAACAGTTTGATCCACGGAGCTTTTAGGTCTGGAT ACGCACAAGAAGCATTAGCATTTTTCCAGGAGATTATTCGCAAAGGGTTGCGCCCGGATG AGTTCACCTGCAGCATAGTTGTAAGAGGCCTCTGTGATGGTGGGCAAATGCAGGTTGCCA CCAGGTTTCTTGAAGTAATGCAACAATCTGGTATTGCACTGAATGCGGCTGCTTACAATG TGCTGATTGATGAGTACTGCAAGAGTGGAAATTTGGATGAAGCTCTCGTGACATGCACAA GAATGAGCGAGGTTGGAGTAGAGCCCAATGTGGTGACATACTCCTCCTTGATAGATGGGC ACTCGAAGAATGGGGAAATGGAAATAGCAATGGCTATATACACAGAGATGGTAGCTAAAG GGGTCGAACCTAATGTCGTGACATACACTGCTCTGATTCATGGCCATGCCAAGAATGGTG ACATGGATGCTGCTTTTTGGTTACAGAAGGAGATGGAAGAGAAAGGCATTTATTCAAACG CAATAACTGTGTCAGTTCTTGTAGATGGTCTGTGCCGAGAAAATAGGGTACAAGATGCAG TCAGATTCATCATGGAATACTCAGGGCAGAAGAAATCTGAGAAAAACCCTTCAATTGCAA ACAGTGTGACATATATGACCTTGATATATGGTCTCTATATAGATGGTCAATACAACGAAG CCTGTCACTTCTTCTCTTGTATGAGAGATTCTGGTATGGTGCCTGATAGATTCACTTACA CACTCGTGATTCGTGGACTGTGCATGCTTGGCTATGTCTTGAATGCGATGATGCTCTATG CTGATATGGTTAAGGTTGGTGTTAAACCCACAAAATGCGCCATGGTCTGCCCTGATATTT GGTCAAGAGAATCAGTTGACCACCGCATGACCTGAAACTCCATCACTAATGAAATCCATA TGGGAAATAAAGTGTAGATAATATTGAACTCACTGATGACAGATCACAGCCTACAGAAAG TCAACTCAATTATTAGCTTGAGCTAGACATGCGTTGTGTGAGAAGCTGGGAGATGGGAGG AGTTGCCGAACACGAACGGTTGGTCGGACAAACAGTAGATTGTCCCTCCTGCTGAGTTTT CCAGGAAGTGCAGATAGCCAAGATTTTCCCAACTGCCCATCAGAAAAGATATATCATGGA TGGTTCGCAGATGATGCCCTTTTCAGGATGTTGCATTTGGTGCAGATCGAAATCTGTGTA TATGTATTGTATCTGTCAGTATCTGTCCATACTTGGCCTATTGATCATGCAAGTATTGTC TGTGGCATGAGTTCTGGCCTGTTCAAAACTTCAATATGTTTCTTTGGACTATCAGCCAGG CTATTAAAATATTTGATATGCTCTCGCTGTGATACACTATCTTCTGCAGAAGGAGTAAGA ACTGATCCCATAGTCTGCTGCTGGCAGGCGACACCTTAGGGTTTATATCTGCAAAACTGC AAATGGCTCATGTCTTTTCGAATGACTCTAGCCAGATGTATTCCGTGGCGGCACCTCAGT TTATATGTGCAAAATTGCAAATGGCTCATGCCACATGTATTACCGTGTATTTAACC