Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0416800-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:14929157:14930268:1 gene:Os09g0416800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCR4-associated factor 1G, carbon cataboliterepressor 4-associated factor 1G, CCR4-associated factor 1-13 description:Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Development and stress response (Os09t0416800-01)
Sequence	ATGGCGACGCCGGCCGCCGAGAAGCCCGACGGGGTGGAGATCCGCGAGGTGTGGGAGGAC AACCTCGAGGCCGAGTTCGCGGTGATTCGGGAGATCGTTGACGACTTCCCGTACGTCGCG ATGGACACGGAGTTCCCGGGCGTCGTCTGCAGGCCGCTCGGGACGTTCAAGTCCAACGCC GATTTCAACTACGCAACGCTCAAAGCCAACGTCGACATGCTGAAGCTTATCCAGCTTGGT TTAACCTTCTCGAATGAGCATGGTGGGCTCCCGTCGCTTGGCCCCGAGGGTCGACCTTGT GTTTGGCAGTTCAACTTTCGTGGCTTCGATCCCCGGACCGACGTCGCTGCTGCAGATTCC ATTGACTTGCTCCGGCGCAGCGGTATTGACTTCACCCGTCACTCGGCTGACGGCGCTGAT GCTCGCCGCTTCGCTGAGCTTCTCATGTCGTCGGGCGTTGTGATGAACTCTGAGGTTCGC TGGGTTACGTTCCATAGCGGATACGACTTTGGCTACTTGCTCAAGTTGCTCACCGGCACA TACCTGCCAGACACGATAACCGGATTCTTCGACCTCATCAGGATATATTTCCCCGTCGTG TATGACATCAAGCACTTGATGCGGTTCTGCAACAGCCTCCATGGTGGGCTGAACAAGCTT GCCGAGCTGCTTGATGTTGAGCGCGTTGGAATTTGTCATCAGGCTGGTTCCGACTCGCTG TTGACCGCGCTGTCATTCAAAAAGCTCAAGGAAGCATACTTCAATGGGTTAACCGAGAAG TATGCCGGTGTGTTGTATGGTCTTGGCACAGAAGGTGGGGAGACCTCCTCTGCTGCTCAC TAA

Peptide Sequence

PEP ID	Os09t0416800-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:14929157:14930268:1 gene:Os09g0416800 transcript:Os09t0416800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCR4-associated factor 1G, carbon cataboliterepressor 4-associated factor 1G, CCR4-associated factor 1-13 description:Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Development and stress response (Os09t0416800-01)
Sequence	MATPAAEKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNA DFNYATLKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADS IDLLRRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFGYLLKLLTGT YLPDTITGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSL LTALSFKKLKEAYFNGLTEKYAGVLYGLGTEGGETSSAAH

Transcript Sequence

Transcript ID	Os09t0416800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14929157:14930268:1 gene:Os09g0416800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCR4-associated factor 1G, carbon cataboliterepressor 4-associated factor 1G, CCR4-associated factor 1-13 description:Component of the CCR4-NOTcomplex, Deadenylase, Deadenylation (poly(A) tail shortening), Development and stress response (Os09t0416800-01)
Sequence	GCCCGGAAAATTTCCCCAATCCGACGCCCTCCTCCTCCTCCCCCCTCCCCCCTGCTGGAT CTCCTCCACTCCCCATGGTAGCCTCCCCCGCCCCGCGCTGCTGACCCCTGGGCCCCACCG CCGCTTCCGCCGCCGCTCCCGTTTCCCCCGGCTCTCGCTCTCGCGCGAGCCGTAGCCGTT GCTGGGGAGGAGGAGGAGGGGAAAGCTCGAGGTATTTGGATGCGCGCGAGCCGATGGCGA CGCCGGCCGCCGAGAAGCCCGACGGGGTGGAGATCCGCGAGGTGTGGGAGGACAACCTCG AGGCCGAGTTCGCGGTGATTCGGGAGATCGTTGACGACTTCCCGTACGTCGCGATGGACA CGGAGTTCCCGGGCGTCGTCTGCAGGCCGCTCGGGACGTTCAAGTCCAACGCCGATTTCA ACTACGCAACGCTCAAAGCCAACGTCGACATGCTGAAGCTTATCCAGCTTGGTTTAACCT TCTCGAATGAGCATGGTGGGCTCCCGTCGCTTGGCCCCGAGGGTCGACCTTGTGTTTGGC AGTTCAACTTTCGTGGCTTCGATCCCCGGACCGACGTCGCTGCTGCAGATTCCATTGACT TGCTCCGGCGCAGCGGTATTGACTTCACCCGTCACTCGGCTGACGGCGCTGATGCTCGCC GCTTCGCTGAGCTTCTCATGTCGTCGGGCGTTGTGATGAACTCTGAGGTTCGCTGGGTTA CGTTCCATAGCGGATACGACTTTGGCTACTTGCTCAAGTTGCTCACCGGCACATACCTGC CAGACACGATAACCGGATTCTTCGACCTCATCAGGATATATTTCCCCGTCGTGTATGACA TCAAGCACTTGATGCGGTTCTGCAACAGCCTCCATGGTGGGCTGAACAAGCTTGCCGAGC TGCTTGATGTTGAGCGCGTTGGAATTTGTCATCAGGCTGGTTCCGACTCGCTGTTGACCG CGCTGTCATTCAAAAAGCTCAAGGAAGCATACTTCAATGGGTTAACCGAGAAGTATGCCG GTGTGTTGTATGGTCTTGGCACAGAAGGTGGGGAGACCTCCTCTGCTGCTCACTAAGTAA TGGATAGTTAAATAAAGGATGAACTATGTTTG