Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0416600-02
CDS Infomation

cds chromosome:IRGSP-1.0:9:14917136:14918733:1 gene:Os09g0416600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0416600-01);Protein of unknown function DUF868, plant family protein. (Os09t0416600-02)
Sequence

ATGCCCGAGGGGGGGATACCGGCATGCTTCCGCGGCGCGCCGGGAGGGGGCGCGGGAGGG
GGCGGTGGCGGTGGCGTGGGCGTGGCGGGGCAGTCGTCAGGGGGCGTGGGGACTAGCCTG
GCGACGTCGGTGTACGAGACGCGGCTCGGGGTTGCGGCGCTGTCGTGGTCGCGCGCGGCG
CTCGGGCTCAGCCTCCGTGTCGTGCTCCGCGTGGCGGGCGGGGCGGGGGCGGGGGCGTGG
GCCGCGGCGTCGTCCTCGGCGGCGTCGGATTACGGGTGCTACGACGAGGGGGCGGAGTGC
TACGGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGCGACCGTCGCGGTGCGGGTCCGGCCG
TGGCTGCTGTGGCGGCGGCGCGGGTCGAAGCGGTTCCGCGTGCGGGACCGGCGGGTCGAC
CTGGCGTGGGACCTCACGCGCGCGCGGTTCGCCTGCCCAGGCTCGCCCGAACCGTCGTCG
GGGTACTTCGTCGCCGTCGTGGTCGACGGCGAGATGGCGCTCGTCGCGGGCGACATGGCG
GAGGAGGCGTACAGGAAGACGAAAGCGCGGCGCGGCCCCGGCCCCGACGCCGTCCTCATC
TCCCGGCGGGAGCACGTGTCGATGCGCGACGCGGGGCACGGCCGCGGCCACAAGACCTTC
GTCAACGTCCGCGGCAAGGAACGGGAGATCTCGGTGGATCTCGTGTCGCGCGGCCACGGC
AAGGACAGGGACAAGGACAAGGACAAGGAGAGGGACAAGGCCGACGTCGGCATGTCGGTC
ACCGTCGACGGCGAGCGCGTGCTCCACATCCGGCGCCTGCGCTGGAAGTTCCGCGGCACC
GAGAAGGTCGACCTCGGCGGCGGCGACGGCGTCCAGGTCTCCTGGGACCTCCACCACTGG
CTCTTCCCCAACCGCGACACGGCCCCCGCCGACGCCTCCGCGGTCACCCCGCCTCCCCAG
CCCGCCCACGCCGTCTTCATCTTCCGCTTCGAGCTCGCCGACATCGCCGGCGACGACCGC
GACTCTGCCGAGGTCAAGGACGAGCACCTCCTCGAAAACGCCGGGAGCGGCGGCGGCGGC
GGCGCGTGGGCAGGCTACCTCGGGAGGTGGGGGCGAGGGGACTGGAGCGAGAGCAGCAGC
AACGGGGAGAACCGGAGGAAGAGGGGGCAAGCCCGGAGGCTGGCCAAGGCGAGCTCGTCG
TCATCGGCGTCGGTGGCTTCCTCCTCCGCGTCGTGGGCGAGCGGCTCGACGGTGATGGAC
TGGGCGAGCCCCGAGGAGGCCGAGCTGCAGCGCGGCCATGGCTTCTCCCTCCTCGTCTAC
GCCTGGAAATGCTAG

Peptide Sequence

PEP ID

Os09t0416600-02
PEP Infomation

pep chromosome:IRGSP-1.0:9:14917136:14918733:1 gene:Os09g0416600 transcript:Os09t0416600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0416600-01);Protein of unknown function DUF868, plant family protein. (Os09t0416600-02)
Sequence

MPEGGIPACFRGAPGGGAGGGGGGGVGVAGQSSGGVGTSLATSVYETRLGVAALSWSRAA
LGLSLRVVLRVAGGAGAGAWAAASSSAASDYGCYDEGAECYGGEEEEEEEEATVAVRVRP
WLLWRRRGSKRFRVRDRRVDLAWDLTRARFACPGSPEPSSGYFVAVVVDGEMALVAGDMA
EEAYRKTKARRGPGPDAVLISRREHVSMRDAGHGRGHKTFVNVRGKEREISVDLVSRGHG
KDRDKDKDKERDKADVGMSVTVDGERVLHIRRLRWKFRGTEKVDLGGGDGVQVSWDLHHW
LFPNRDTAPADASAVTPPPQPAHAVFIFRFELADIAGDDRDSAEVKDEHLLENAGSGGGG
GAWAGYLGRWGRGDWSESSSNGENRRKRGQARRLAKASSSSSASVASSSASWASGSTVMD
WASPEEAELQRGHGFSLLVYAWKC

Transcript Sequence

Transcript ID

Os09t0416600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:14917136:14918733:1 gene:Os09g0416600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os09t0416600-01);Protein of unknown function DUF868, plant family protein. (Os09t0416600-02)
Sequence

ACTGCTTGCTTTCCTCCTCTCTCTCTCTCCCCCTTCGCCGTAGACGCGAACGCCGCGGCG
GCGAGAAGGTCACGGCGAGGGGAGCTCGTGTCGAGGCGAGGCGAGGTGGGGGTTGATTAT
GCCCGAGGGGGGGATACCGGCATGCTTCCGCGGCGCGCCGGGAGGGGGCGCGGGAGGGGG
CGGTGGCGGTGGCGTGGGCGTGGCGGGGCAGTCGTCAGGGGGCGTGGGGACTAGCCTGGC
GACGTCGGTGTACGAGACGCGGCTCGGGGTTGCGGCGCTGTCGTGGTCGCGCGCGGCGCT
CGGGCTCAGCCTCCGTGTCGTGCTCCGCGTGGCGGGCGGGGCGGGGGCGGGGGCGTGGGC
CGCGGCGTCGTCCTCGGCGGCGTCGGATTACGGGTGCTACGACGAGGGGGCGGAGTGCTA
CGGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGCGACCGTCGCGGTGCGGGTCCGGCCGTG
GCTGCTGTGGCGGCGGCGCGGGTCGAAGCGGTTCCGCGTGCGGGACCGGCGGGTCGACCT
GGCGTGGGACCTCACGCGCGCGCGGTTCGCCTGCCCAGGCTCGCCCGAACCGTCGTCGGG
GTACTTCGTCGCCGTCGTGGTCGACGGCGAGATGGCGCTCGTCGCGGGCGACATGGCGGA
GGAGGCGTACAGGAAGACGAAAGCGCGGCGCGGCCCCGGCCCCGACGCCGTCCTCATCTC
CCGGCGGGAGCACGTGTCGATGCGCGACGCGGGGCACGGCCGCGGCCACAAGACCTTCGT
CAACGTCCGCGGCAAGGAACGGGAGATCTCGGTGGATCTCGTGTCGCGCGGCCACGGCAA
GGACAGGGACAAGGACAAGGACAAGGAGAGGGACAAGGCCGACGTCGGCATGTCGGTCAC
CGTCGACGGCGAGCGCGTGCTCCACATCCGGCGCCTGCGCTGGAAGTTCCGCGGCACCGA
GAAGGTCGACCTCGGCGGCGGCGACGGCGTCCAGGTCTCCTGGGACCTCCACCACTGGCT
CTTCCCCAACCGCGACACGGCCCCCGCCGACGCCTCCGCGGTCACCCCGCCTCCCCAGCC
CGCCCACGCCGTCTTCATCTTCCGCTTCGAGCTCGCCGACATCGCCGGCGACGACCGCGA
CTCTGCCGAGGTCAAGGACGAGCACCTCCTCGAAAACGCCGGGAGCGGCGGCGGCGGCGG
CGCGTGGGCAGGCTACCTCGGGAGGTGGGGGCGAGGGGACTGGAGCGAGAGCAGCAGCAA
CGGGGAGAACCGGAGGAAGAGGGGGCAAGCCCGGAGGCTGGCCAAGGCGAGCTCGTCGTC
ATCGGCGTCGGTGGCTTCCTCCTCCGCGTCGTGGGCGAGCGGCTCGACGGTGATGGACTG
GGCGAGCCCCGAGGAGGCCGAGCTGCAGCGCGGCCATGGCTTCTCCCTCCTCGTCTACGC
CTGGAAATGCTAGCAATTGGCGCCGAGCAAAGCATTCTTTCCATTGATGATGATTGATGG
TAATTCAGTGAGATTTTTTCTTCTTCTTCTTCTTCTATCTTCTTCGGATTGTTGTAAGTT
GCAATTGTTATCCGAGCAATGTTCTTGTGCAGTTTTTG