Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0416500-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:14896175:14901389:1 gene:Os09g0416500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0416500-01)
Sequence

ATGGCGACTCCCGTGAACCAGGATAGCATCACTCCGGTGAACACGTGGGAGGAGGATGAA
CTGGAGCTGGAAGAAGAGGAGGGTTTGTTATGCAAGCGCAAAAGGGCTAAGTTTTCAGAT
TCCACTGTCCGACAGCAACAGGGGATTGAAGCTGCAGCCATGGATATGGTGATGGAGGAG
GCTGCTGCTCTTTCACTCGGAGTTTCCGCTAGCAAGGAGCCTGTGCATGTGGCCACTGGT
CGTGTCGAGCAGAGCAATTGTGGAGCAAAGCATGCCAATGGGACTACAGATAATGAACCA
GCAAGGTTGAGACTGCATAAAATCTGCTCTGCAACTCACTGGAAGGAACCATCATATGAC
TTTGAAGAACAAGGGCCTTCCCATCTTAAACTGTTCACTTGCAAGGTGACTATCCATGTG
GATACATTCACAACCACCATTGTGGAGTGCATCAGTGAACCTAATCGTTCCAAGAAAGCT
GCCCAGGAACATGCTGCTCAAGGTGCATTGTGGTACCTCAAGATCTTTGGACACGCCAAT
TAA

Peptide Sequence

PEP ID

Os09t0416500-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:14896175:14901389:1 gene:Os09g0416500 transcript:Os09t0416500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0416500-01)
Sequence

MATPVNQDSITPVNTWEEDELELEEEEGLLCKRKRAKFSDSTVRQQQGIEAAAMDMVMEE
AAALSLGVSASKEPVHVATGRVEQSNCGAKHANGTTDNEPARLRLHKICSATHWKEPSYD
FEEQGPSHLKLFTCKVTIHVDTFTTTIVECISEPNRSKKAAQEHAAQGALWYLKIFGHAN

Transcript Sequence

Transcript ID

Os09t0416500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:14896175:14901389:1 gene:Os09g0416500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os09t0416500-01)
Sequence

GGCTGCTCGTCTTCCTCCGCCGCCCATCCGAAGAGTTGCCCACGCCGCGGCGGCGCCGGC
GAGTCGGCGACGGCGACGAGCAAGCCCGGGCCGGAGAGCGCTGCTGCCGCCTCCAGACGA
GGGTTTTCTGGTCATGGCGACTCCCGTGAACCAGGATAGCATCACTCCGGTGAACACGTG
GGAGGAGGATGAACTGGAGCTGGAAGAAGAGGAGGGTTTGTTATGCAAGCGCAAAAGGGC
TAAGTTTTCAGATTCCACTGTCCGACAGCAACAGGGGATTGAAGCTGCAGCCATGGATAT
GGTGATGGAGGAGGCTGCTGCTCTTTCACTCGGAGTTTCCGCTAGCAAGGAGCCTGTGCA
TGTGGCCACTGGTCGTGTCGAGCAGAGCAATTGTGGAGCAAAGCATGCCAATGGGACTAC
AGATAATGAACCAGCAAGGTTGAGACTGCATAAAATCTGCTCTGCAACTCACTGGAAGGA
ACCATCATATGACTTTGAAGAACAAGGGCCTTCCCATCTTAAACTGTTCACTTGCAAGGT
GACTATCCATGTGGATACATTCACAACCACCATTGTGGAGTGCATCAGTGAACCTAATCG
TTCCAAGAAAGCTGCCCAGGAACATGCTGCTCAAGGTGCATTGTGGTACCTCAAGATCTT
TGGACACGCCAATTAATCTCAGACGCTCCAGGTAGTAACTTAAACGACTTCCAGGTAGCA
CAGTGCTAACCCAGTGTTCCTTTTCCACTCGCGTGTATTTCATCCACTACAGGGGCAGTG
TTCTTTCTTAATCCAAGGTTGGATCAGTTGCTCCATGTACATATCCGAAATTCTTGCTCT
ACGTAGGTGTCATCTATCTAGTCCAGGAGAGTTCTATGTTATGTCGTACATGGCCACATG
GGGTCCCTTTTTGTATATACTGCTACTACGTATTTACCACTTGGGCAGAGCCAGAAAGGC
CTTTCTACTATGCTCTATAC