Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os09t0415800-01
CDS Infomation

cds chromosome:IRGSP-1.0:9:14870986:14878129:-1 gene:Os09g0415800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphofructokinase 8 description:Phosphofructokinase family protein. (Os09t0415800-01)
Sequence

ATGACCTTTTCTGGGATGGACATTGCTTTAAAAGCAAGCACACACTCTTCTACATCCCAG
CAACACTGGTTGCATTCAACCAGGTACCGGTGTCAATATGGTTTGGGTTCCACTCACTTG
AATGGAAGAAAGAGAAGTCCTATGGTACTGTCTGTAAGAGCTGTTTCTGGGAAATCAGAC
TTAGATTTCAGTGATCCTTCTTGGAAGGAAAAGTATCAAGAAGACTGGAATAGGCGTTTC
AGTTTGCCGCATATTACAGATATATATGATTTGAAGCCAAGGCTAACTACATTCTCTCTG
AAGAAAAACAGGACTGATGGTGGTAGTTTATCAGCAGATAAGTGGAATGGCTATGTAAAT
AAGGATGACCGTGCACTTCTGAAGGTGATAAAGTATGCCTCCCCTACTTCTGCTGGAGCT
GAGTGCGTAGATCCTGACTGCAGTTGGGTTGAACATTGGATTCATCGTGCAGGGCCTCGT
AAGGAGATATACTATGAGCCTGCAGAAGTAAAAGCTGCTATTGTTACCTGTGGAGGCCTC
TGCCCTGGTTTAAATGATGTCATTAGACAGATAGTATTTACATTGGAGATCTATGGGGTT
AAGAACATTGTTGGAATTCAGTTTGGTTATCGTGGATTTTTTGAGAAAGGCTTAAAAGAA
ATGCCTCTTTCACGTAAAGTGGTGGAAAACATAAATCTTTCTGGTGGAAGTTTCCTAGGT
GTGTCTCGTGGAGGAGCTAAAACTAGTGAGATCGTCGATAGTATACAAGCCAGAAGAATT
GATATGCTTTTTGTAATTGGTGGAAACGGTAGCCATGCAGGAGCTAATGCTATCCATGAG
GAGTGTCGTAAGAGAAAACTGAAAGTGTCAGTTGTAGCAGTTCCAAAGACAATTGATAAT
GATATACTATTCATGGATAAGACTTTTGGTTTTGACACGGCTGTAGAAGAAGCTCAGCGT
GCCATCAATTCTGCCTACATAGAGGCACGAAGTGCATATCATGGAATTGGGTTGGTCAAA
TTAATGGGAAGAAGTAGTGGGTTCATTGCCATGCAAGCTTCTCTTTCCAGTGGACAGATT
GATGTCTGCCTAATACCCGAGGTATCTTTTACACTAGATGGAGAACATGGTGTCATGCGA
CACCTTGAACATTTACTGGAAAAAAAGGGATTTTGCGTGGTTTGTGTTGCTGAAGGTGCA
GGGCAGGATTTACTGCAAAAATCAAATGCAACTGATGCATCAGGAAATGTAATACTTAGT
GACTTTGGTGTCCACATGCAACAGAAGATTAAGAGTCATTTCAAGGACATCGGTGTTCCA
GCTGATGTAAAATACATTGATCCGACATATATGGTCCGGGCCTGTCGTGCGAATGCATCT
GATGCTATCTTGTGCACTGTACTTGGACAAAATGCTGTTCATGGAGCCTTTGCCGGGTTC
AGTGGTATCACATCTGGTATTTGCAACACGCACTACGCTTTCCTCCCGATCACAGAAGTC
ATCACAAAACCAAAGCGCGTGAACCCCAACAGCAGGATGTGGCACCGCTGCCTCACTTCC
ACTGGCCAACCGGACTTCCACTGA

Peptide Sequence

PEP ID

Os09t0415800-01
PEP Infomation

pep chromosome:IRGSP-1.0:9:14870986:14878129:-1 gene:Os09g0415800 transcript:Os09t0415800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphofructokinase 8 description:Phosphofructokinase family protein. (Os09t0415800-01)
Sequence

MTFSGMDIALKASTHSSTSQQHWLHSTRYRCQYGLGSTHLNGRKRSPMVLSVRAVSGKSD
LDFSDPSWKEKYQEDWNRRFSLPHITDIYDLKPRLTTFSLKKNRTDGGSLSADKWNGYVN
KDDRALLKVIKYASPTSAGAECVDPDCSWVEHWIHRAGPRKEIYYEPAEVKAAIVTCGGL
CPGLNDVIRQIVFTLEIYGVKNIVGIQFGYRGFFEKGLKEMPLSRKVVENINLSGGSFLG
VSRGGAKTSEIVDSIQARRIDMLFVIGGNGSHAGANAIHEECRKRKLKVSVVAVPKTIDN
DILFMDKTFGFDTAVEEAQRAINSAYIEARSAYHGIGLVKLMGRSSGFIAMQASLSSGQI
DVCLIPEVSFTLDGEHGVMRHLEHLLEKKGFCVVCVAEGAGQDLLQKSNATDASGNVILS
DFGVHMQQKIKSHFKDIGVPADVKYIDPTYMVRACRANASDAILCTVLGQNAVHGAFAGF
SGITSGICNTHYAFLPITEVITKPKRVNPNSRMWHRCLTSTGQPDFH

Transcript Sequence

Transcript ID

Os09t0415800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:9:14870986:14878129:-1 gene:Os09g0415800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphofructokinase 8 description:Phosphofructokinase family protein. (Os09t0415800-01)
Sequence

CGACTTGCGTCTCTCTCTCCCCAAAGCTCGGAGCCCCGCCGCAATCCGCCGCCGCGTCTC
GCCGGCGCAAGCTCCAGATTAGTGGGTCCACATATGACCTTTTCTGGGATGGACATTGCT
TTAAAAGCAAGCACACACTCTTCTACATCCCAGCAACACTGGTTGCATTCAACCAGGTAC
CGGTGTCAATATGGTTTGGGTTCCACTCACTTGAATGGAAGAAAGAGAAGTCCTATGGTA
CTGTCTGTAAGAGCTGTTTCTGGGAAATCAGACTTAGATTTCAGTGATCCTTCTTGGAAG
GAAAAGTATCAAGAAGACTGGAATAGGCGTTTCAGTTTGCCGCATATTACAGATATATAT
GATTTGAAGCCAAGGCTAACTACATTCTCTCTGAAGAAAAACAGGACTGATGGTGGTAGT
TTATCAGCAGATAAGTGGAATGGCTATGTAAATAAGGATGACCGTGCACTTCTGAAGGTG
ATAAAGTATGCCTCCCCTACTTCTGCTGGAGCTGAGTGCGTAGATCCTGACTGCAGTTGG
GTTGAACATTGGATTCATCGTGCAGGGCCTCGTAAGGAGATATACTATGAGCCTGCAGAA
GTAAAAGCTGCTATTGTTACCTGTGGAGGCCTCTGCCCTGGTTTAAATGATGTCATTAGA
CAGATAGTATTTACATTGGAGATCTATGGGGTTAAGAACATTGTTGGAATTCAGTTTGGT
TATCGTGGATTTTTTGAGAAAGGCTTAAAAGAAATGCCTCTTTCACGTAAAGTGGTGGAA
AACATAAATCTTTCTGGTGGAAGTTTCCTAGGTGTGTCTCGTGGAGGAGCTAAAACTAGT
GAGATCGTCGATAGTATACAAGCCAGAAGAATTGATATGCTTTTTGTAATTGGTGGAAAC
GGTAGCCATGCAGGAGCTAATGCTATCCATGAGGAGTGTCGTAAGAGAAAACTGAAAGTG
TCAGTTGTAGCAGTTCCAAAGACAATTGATAATGATATACTATTCATGGATAAGACTTTT
GGTTTTGACACGGCTGTAGAAGAAGCTCAGCGTGCCATCAATTCTGCCTACATAGAGGCA
CGAAGTGCATATCATGGAATTGGGTTGGTCAAATTAATGGGAAGAAGTAGTGGGTTCATT
GCCATGCAAGCTTCTCTTTCCAGTGGACAGATTGATGTCTGCCTAATACCCGAGGTATCT
TTTACACTAGATGGAGAACATGGTGTCATGCGACACCTTGAACATTTACTGGAAAAAAAG
GGATTTTGCGTGGTTTGTGTTGCTGAAGGTGCAGGGCAGGATTTACTGCAAAAATCAAAT
GCAACTGATGCATCAGGAAATGTAATACTTAGTGACTTTGGTGTCCACATGCAACAGAAG
ATTAAGAGTCATTTCAAGGACATCGGTGTTCCAGCTGATGTAAAATACATTGATCCGACA
TATATGGTCCGGGCCTGTCGTGCGAATGCATCTGATGCTATCTTGTGCACTGTACTTGGA
CAAAATGCTGTTCATGGAGCCTTTGCCGGGTTCAGTGGTATCACATCTGGTATTTGCAAC
ACGCACTACGCTTTCCTCCCGATCACAGAAGTCATCACAAAACCAAAGCGCGTGAACCCC
AACAGCAGGATGTGGCACCGCTGCCTCACTTCCACTGGCCAACCGGACTTCCACTGACCT
TGTACTATTTGGCATTTACCTCACTTCTTTTATTGGAGTTAATTTAGCATTATTTTTGCT
AATCATGAGACTAGTAACAGCTCATGTTACCACAAAGGTGATCAATAAATAATGTTGTAA
CGCGATGACAAGTAACTCTGGTAGTTTATTTTCAGCACCAATATTTTTGTGTATCTCAAT
GCTGAAAAGATTCCTTTTTCTTCGAGATCGGCTGCGTGATTTCACCTATGAGACGTTTTA
TTAATTCTG