Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os09t0414900-01
CDS Infomation	cds chromosome:IRGSP-1.0:9:14828981:14830515:1 gene:Os09g0414900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GASA5-like protein (Fragment). (Os09t0414900-01)
Sequence	ATGGCTTTGGCTGGTAGGCTACTTGTCCTCTTCGCCATTGCTCTCCTTGCCATCTCCATA GCCGAGCACAAGGCGCTAGCCAAGGGATCAACCAGTGAGCATGATGATAACGTTTACCAA GTAAGCAAGGGAGGACAGGGCAGCCTGAAGAGCTATCAGTGCTCGCCGCAGTGCGCGTAC CGGTGCAGCCAGACGCAGTACAAGAAGCCGTGCCTCTTCTTCTGCAACAAGTGCTGCAAC GCCTGCCTCTGCGTGCCGTCGGGCCTCTACGGCAACAAGGGCGAGTGCCCCTGCTACAAC AACTGGAAGACCAAGCGCGGCGGCCCCAAGTGCCCGTGA

Peptide Sequence

PEP ID	Os09t0414900-01
PEP Infomation	pep chromosome:IRGSP-1.0:9:14828981:14830515:1 gene:Os09g0414900 transcript:Os09t0414900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GASA5-like protein (Fragment). (Os09t0414900-01)
Sequence	MALAGRLLVLFAIALLAISIAEHKALAKGSTSEHDDNVYQVSKGGQGSLKSYQCSPQCAY RCSQTQYKKPCLFFCNKCCNACLCVPSGLYGNKGECPCYNNWKTKRGGPKCP

Transcript Sequence

Transcript ID	Os09t0414900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:9:14828981:14830515:1 gene:Os09g0414900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to GASA5-like protein (Fragment). (Os09t0414900-01)
Sequence	AAACTCGTCTTGGAACCCACTGCTTTGCCTATAAATATGTAGCTATAGCTTCTCTGCTTT CCGTCGCTTAACACAGTTAACACCAACGCAGTGGTGCTCTCTCTTCAGTTAGTGGAGCTT CAGAGAAATGGCTTTGGCTGGTAGGCTACTTGTCCTCTTCGCCATTGCTCTCCTTGCCAT CTCCATAGCCGAGCACAAGGCGCTAGCCAAGGGATCAACCAGTGAGCATGATGATAACGT TTACCAAGTAAGCAAGGGAGGACAGGGCAGCCTGAAGAGCTATCAGTGCTCGCCGCAGTG CGCGTACCGGTGCAGCCAGACGCAGTACAAGAAGCCGTGCCTCTTCTTCTGCAACAAGTG CTGCAACGCCTGCCTCTGCGTGCCGTCGGGCCTCTACGGCAACAAGGGCGAGTGCCCCTG CTACAACAACTGGAAGACCAAGCGCGGCGGCCCCAAGTGCCCGTGAAAAAACCTTCAGTG GACGCTCGAATTCTTTGGTCATTTCAGTACCCAAACTCTGCTCGCACGATGCCGATTGAT TCTAGCATGGCCGTCGGGGCAGAGGCAGCTGTGGCTTCCTATACATTACATACACACGGT TGTAAAAATGTACATCTGGGCTATCCATTGCTGTACGCCTGAACGGTTCCAGAGGGGTGA TGCAAATCATGCAGATGCAGCTGTATCGCTACCACG